Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023741
CDS Infomation

pacid=37459544 polypeptide=PGSC0003DMP400016194 locus=PGSC0003DMG400009184 ID=PGSC0003DMT400023741.v4.03 annot-version=v4.03
Sequence

ATGGATCTTAATGATCTGAACAAGGTTTGGGAAGTCAAACCTTTGAAGAAGGTGCGTGAT
GATGAGGCGAGGGAAATTCTTGAAAATGTAGCAAAACAGGTGCAACCTATAATGCGCAAA
CGGAAGTGGAAAGTTAAGGTGCTCTCTGAATTTTGTCCTGCCAATCCATCTCTTTTGGGA
CTCAACATAGGAGGAGGTGCTGAAGTTAAGATTAGATTGCGCCGGCCAAACAATGAGTGG
GACTTTTACCCTTATGCTCAAATTCTTGATACCATGCTTCATGAACTCTGCCACAATGAA
TATGGCCCACATAATGCTGACTTTTATAACCTATTGGATGAAATCAGAAAGGAATGTGAG
GAGCTTATGGCTAAAGGAATTACGGGTACTGGACAAGGATTTGATCTCCCAGGAAAACGA
TTGGGTGGGTTTTCTCGTCAACCTCCGTTGCCATCATTGCATCAGAAAGCACTGGCTGCT
GCAGCAAACAGAGCACGATTGGATGTACTTTTGCCATCGGGGCCTAAGCGTCTTGGGGGT
GATAGCAGCATCAAGGCTGCACTCAGCCCAATTCAAGCTGCCGCGATGGCTGCAGAAAGG
AGATTACACGATGATCTGTGGTGTGGCTCCAAAATGTTAGAGAGTGAGGGGCCTTGTGAA
AGCTCCAAAGCTTCAGCGATACCGGAGTCTCGTCATAATTCAATTGTAGGAACCAATTCT
AAGATAATGTGGGAATGTTGTGTGTGCACTTTATTGAATCAGCCTCTAGCCCTCCTTTGT
GGAGCTTGTGGAACCCCAAAGGACAGAGGAAATGAAGCTAAGGCAGCAAAGGCCTGGTCT
TGTAAGTTTTGCACGTTGCAAAATAGCCATGAGGTTGAACGGTGCTTAGCTTGTGGAGAG
TGGAGATACTCTTATGGTCCACCTGTTTCAATGACAGATCCTCGTATTGGCACGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016194
PEP Infomation

pacid=37459544 transcript=PGSC0003DMT400023741 locus=PGSC0003DMG400009184 ID=PGSC0003DMT400023741.v4.03 annot-version=v4.03
Sequence

MDLNDLNKVWEVKPLKKVRDDEAREILENVAKQVQPIMRKRKWKVKVLSEFCPANPSLLG
LNIGGGAEVKIRLRRPNNEWDFYPYAQILDTMLHELCHNEYGPHNADFYNLLDEIRKECE
ELMAKGITGTGQGFDLPGKRLGGFSRQPPLPSLHQKALAAAANRARLDVLLPSGPKRLGG
DSSIKAALSPIQAAAMAAERRLHDDLWCGSKMLESEGPCESSKASAIPESRHNSIVGTNS
KIMWECCVCTLLNQPLALLCGACGTPKDRGNEAKAAKAWSCKFCTLQNSHEVERCLACGE
WRYSYGPPVSMTDPRIGT*

Transcript Sequence

Transcript ID

PGSC0003DMT400023741
Transcript Infomation

pacid=37459544 locus=PGSC0003DMG400009184 ID=PGSC0003DMT400023741.v4.03 annot-version=v4.03
Sequence

ATGGATCTTAATGATCTGAACAAGGTTTGGGAAGTCAAACCTTTGAAGAAGGTGCGTGAT
GATGAGGCGAGGGAAATTCTTGAAAATGTAGCAAAACAGGTGCAACCTATAATGCGCAAA
CGGAAGTGGAAAGTTAAGGTGCTCTCTGAATTTTGTCCTGCCAATCCATCTCTTTTGGGA
CTCAACATAGGAGGAGGTGCTGAAGTTAAGATTAGATTGCGCCGGCCAAACAATGAGTGG
GACTTTTACCCTTATGCTCAAATTCTTGATACCATGCTTCATGAACTCTGCCACAATGAA
TATGGCCCACATAATGCTGACTTTTATAACCTATTGGATGAAATCAGAAAGGAATGTGAG
GAGCTTATGGCTAAAGGAATTACGGGTACTGGACAAGGATTTGATCTCCCAGGAAAACGA
TTGGGTGGGTTTTCTCGTCAACCTCCGTTGCCATCATTGCATCAGAAAGCACTGGCTGCT
GCAGCAAACAGAGCACGATTGGATGTACTTTTGCCATCGGGGCCTAAGCGTCTTGGGGGT
GATAGCAGCATCAAGGCTGCACTCAGCCCAATTCAAGCTGCCGCGATGGCTGCAGAAAGG
AGATTACACGATGATCTGTGGTGTGGCTCCAAAATGTTAGAGAGTGAGGGGCCTTGTGAA
AGCTCCAAAGCTTCAGCGATACCGGAGTCTCGTCATAATTCAATTGTAGGAACCAATTCT
AAGATAATGTGGGAATGTTGTGTGTGCACTTTATTGAATCAGCCTCTAGCCCTCCTTTGT
GGAGCTTGTGGAACCCCAAAGGACAGAGGAAATGAAGCTAAGGCAGCAAAGGCCTGGTCT
TGTAAGTTTTGCACGTTGCAAAATAGCCATGAGGTTGAACGGTGCTTAGCTTGTGGAGAG
TGGAGATACTCTTATGGTCCACCTGTTTCAATGACAGATCCTCGTATTGGCACGTAA