Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023738
CDS Infomation

pacid=37461971 polypeptide=PGSC0003DMP400016191 locus=PGSC0003DMG400009182 ID=PGSC0003DMT400023738.v4.03 annot-version=v4.03
Sequence

ATGGGATCTGCTGGGGAGAAGTTAGACCTTGAACTTGACGAGGAGATTCCGTTTAGCTCA
TCCCAGGGAACTATCAAAATAGACAGTCTGCATTATGAGGCACCTCATATTGCATCACCC
AGAAGCTATCGCTCTACTAGGGTCTTAAGAAAGATGTATCAGATCAGCCTTCTAAGGAGT
ATATACATTGTTATTATCAAAGCAAAGATCAATGTGTTACTTCCTTTTGGCCCCCTGGCC
ATATTGCTTCACAATCTTACAGGAAAACATACTTGGGTCTTTTTCTTCAGTTTACTGGGC
ATTACACCTTTAGCTGAGCGCTTGGGCTATGTGACTGAGCAGCTCGCGTTCTATACCGGG
CCAACAGTTGGGGGCCTTCTGAATGCTACATTTGGAAATGCAACTGAAATGATAATCTCG
CTATATGCATTGAACAATGGAATGATGCGGGTTGTTAAACAGTCCTTGCTGGGTTCCATT
TTATCAAATATGCTGTTGGTACTTGGCTGTGCCTTCTTCAGTGGTGGAATTATTCATCAC
CAGAAAGTTCAGGTGTTCAATAAGGCTGCTGCCATTGTGAACTCAGGATTATTGTTGATG
GCAGTCATGGGTTTGTTATTTCCAGCTGTACTTCATTTCACCCACACAGAATTGCATTTT
GGCAAGTCACAGTTGGCTCTTTCAAGATTTAGCAGTTGCATAATGCTGGTAGCATATGCA
AGCTACCTATTCTTTCAGCTCAAGATTCAACCAAATCTGTATAGCTCTGTGAGTGAGGAT
GAAGAACACAATTCAGCAGATTCTGAAGAGGAAGAGGCGCCTGAGATAACCCAGTGGGAA
GCTATTGGGTGGCTTGCTGTTTTGACAATATGGATATCAGTGCTGTCTGGATATCTAGTA
GATGCCATCGAGGGTGCATCTGACTCGTTGAACATGCCGATGTCCTTTATTAGTGTCATC
TTGCTTCCAATCGTAGGAAATGCGGCAGAACACGCCAGCGCAATCATGTTCGCAATGAAA
GATAAGCTTGACATCACACTTGGAGTTGCAATTGGGTCTTCTACTCAGATATCAATGTTT
GTGATACCGTTTTGCGTTGTCGTTGGTTGGTTTATGGGAAAGCCCATGGACTTGAATTTC
CAATTATTCGAGACCGCTACACTCTTCATCACAGTGCTAGTCGTGGCATTCATGTTGCAG
GAAGGCACATCAAACTATTTTAAAGGGTTGATGCTGATCCTATGCTATCTGATTGTTGCT
GCAAGTTTTTTTGTTCACGTTGATCCATCCAATGATGCAGACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016191
PEP Infomation

pacid=37461971 transcript=PGSC0003DMT400023738 locus=PGSC0003DMG400009182 ID=PGSC0003DMT400023738.v4.03 annot-version=v4.03
Sequence

MGSAGEKLDLELDEEIPFSSSQGTIKIDSLHYEAPHIASPRSYRSTRVLRKMYQISLLRS
IYIVIIKAKINVLLPFGPLAILLHNLTGKHTWVFFFSLLGITPLAERLGYVTEQLAFYTG
PTVGGLLNATFGNATEMIISLYALNNGMMRVVKQSLLGSILSNMLLVLGCAFFSGGIIHH
QKVQVFNKAAAIVNSGLLLMAVMGLLFPAVLHFTHTELHFGKSQLALSRFSSCIMLVAYA
SYLFFQLKIQPNLYSSVSEDEEHNSADSEEEEAPEITQWEAIGWLAVLTIWISVLSGYLV
DAIEGASDSLNMPMSFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMF
VIPFCVVVGWFMGKPMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVA
ASFFVHVDPSNDAD*

Transcript Sequence

Transcript ID

PGSC0003DMT400023738
Transcript Infomation

pacid=37461971 locus=PGSC0003DMG400009182 ID=PGSC0003DMT400023738.v4.03 annot-version=v4.03
Sequence

ATGGGATCTGCTGGGGAGAAGTTAGACCTTGAACTTGACGAGGAGATTCCGTTTAGCTCA
TCCCAGGGAACTATCAAAATAGACAGTCTGCATTATGAGGCACCTCATATTGCATCACCC
AGAAGCTATCGCTCTACTAGGGTCTTAAGAAAGATGTATCAGATCAGCCTTCTAAGGAGT
ATATACATTGTTATTATCAAAGCAAAGATCAATGTGTTACTTCCTTTTGGCCCCCTGGCC
ATATTGCTTCACAATCTTACAGGAAAACATACTTGGGTCTTTTTCTTCAGTTTACTGGGC
ATTACACCTTTAGCTGAGCGCTTGGGCTATGTGACTGAGCAGCTCGCGTTCTATACCGGG
CCAACAGTTGGGGGCCTTCTGAATGCTACATTTGGAAATGCAACTGAAATGATAATCTCG
CTATATGCATTGAACAATGGAATGATGCGGGTTGTTAAACAGTCCTTGCTGGGTTCCATT
TTATCAAATATGCTGTTGGTACTTGGCTGTGCCTTCTTCAGTGGTGGAATTATTCATCAC
CAGAAAGTTCAGGTGTTCAATAAGGCTGCTGCCATTGTGAACTCAGGATTATTGTTGATG
GCAGTCATGGGTTTGTTATTTCCAGCTGTACTTCATTTCACCCACACAGAATTGCATTTT
GGCAAGTCACAGTTGGCTCTTTCAAGATTTAGCAGTTGCATAATGCTGGTAGCATATGCA
AGCTACCTATTCTTTCAGCTCAAGATTCAACCAAATCTGTATAGCTCTGTGAGTGAGGAT
GAAGAACACAATTCAGCAGATTCTGAAGAGGAAGAGGCGCCTGAGATAACCCAGTGGGAA
GCTATTGGGTGGCTTGCTGTTTTGACAATATGGATATCAGTGCTGTCTGGATATCTAGTA
GATGCCATCGAGGGTGCATCTGACTCGTTGAACATGCCGATGTCCTTTATTAGTGTCATC
TTGCTTCCAATCGTAGGAAATGCGGCAGAACACGCCAGCGCAATCATGTTCGCAATGAAA
GATAAGCTTGACATCACACTTGGAGTTGCAATTGGGTCTTCTACTCAGATATCAATGTTT
GTGATACCGTTTTGCGTTGTCGTTGGTTGGTTTATGGGAAAGCCCATGGACTTGAATTTC
CAATTATTCGAGACCGCTACACTCTTCATCACAGTGCTAGTCGTGGCATTCATGTTGCAG
GAAGGCACATCAAACTATTTTAAAGGGTTGATGCTGATCCTATGCTATCTGATTGTTGCT
GCAAGTTTTTTTGTTCACGTTGATCCATCCAATGATGCAGACTAA