Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023732
CDS Infomation

pacid=37460874 polypeptide=PGSC0003DMP400016186 locus=PGSC0003DMG400009180 ID=PGSC0003DMT400023732.v4.03 annot-version=v4.03
Sequence

ATGAGGTTGCTGCTGCTGCTGCCGATACTCATCGGCATTTTTCTGTATTGTGCTAATTAT
GCCATTGCCGACACAGATCCAAATGACGCATCTGCTCTGAGAGTTCTGTATAGCAGCCTA
AATTCACCTGGACAGCTAACAAAATGGAATGCCAATGGTGGTGATCCTTGTGGAGAGTCC
TGGACAGGTATTACTTGCTCGGGCAATAGAGTTACTGAAATCAAGATATCAGGTCTTGGA
CTCTCTGGTTCACTGGGCTACCAATTAGCAAGTCTTACATCGGTGACTAATTTTGACATA
AGTAATAACAATTTGGGAAACCAGTTACCTTATCAGCTTCCTCCAAATGTGCAAAGATTA
AACCTTGCTGCTAATGGTTTTAATGGTGCCCTTCCATATTCCGTTTCGCAGATGACTTCC
CTCCGATACTTAAATGTCAGTCATAATCAAATTCAAGGACAAGTGACTGTCGCGTTCGAC
TCTCTGTCTTCTCTCAATACATTGGATTTCTCATTCAATGCTATGACGGGTGATCTTCCT
CAAAGCTTCAAGGCACTGACTAGTATGAATAAAATGTATTTGCAGAACAACCAGTTTACA
GGAACTATTGATATCTTAGCCAATCTTCCTCTTGATGATTTGAATGTTGAGAACAACCGT
TTTACTGGCTGGGTTCCTGATCACTTGAAAGGGATCACGAAATCAAATGGTAACTCATGG
AACTCAGGATCTGCACCCCCTCCTCCACCTGGCACACCCCCTGCAAGCAGGCCGCACCAC
AAATCTGGAGGCAATAATAGCCCTACTGATGGTGCAAGCAGTGGTGATGGTGGTGGTAAA
TCGGGGATAAGGGGTGGAGCCATTGCAGGCATAGTGATATCTGTTCTAGTTGTTGGGGCA
ATTGTAGCATTCTTTGTTATCAAGAAGAGATTGAAGCGGTCATCGACGGACATTGAGAGA
CATGATAATCAGCCATTTGCTCCTCTTGCTCCCCCCCAGGAAGTACATGAATTGAAAACT
AATGAAGCTTCCTCTGCGCCAATAGTGAAAGTATTTGAAGCTCCTGCAGTAGTAAATCTA
AGACCTCCACCTATTGAACGCCACAAGTCATTTGACGAAGTTGACATAGCAGCAAAACCA
ATTGTCCCACCCAAGAAAGTTAATACAGCTAAAATAGATGCAAGACAATATTCAATCGCA
GACCTACAGATGGCGACTGATAGCTTCAATGTTGATAACCTTATTGGCGAGGGATCATTT
GGGCGTGTTTATAGGGCTCAGTTTGATGATGGAAAGGTTCTTGCAGTCAAGAAAATCAAC
TCTTCTGCACTCCAGAATCCTGAAGATTTTCTCGATATTGTTTCTGAGATATCACGGTTG
CACCATCCAAATGTTACTGAGCTGGTTGGATATTGTTCAGAGCACGGGCAGCATCTGCTG
GTTTATGAATTCCACAAAAATGGTTCTCTGCATGATTTCCTGCATCTGTTAGATGAGGAA
AGCAAGCCTCTAACATGGAATAGCCGAGTTAAGATTGCACTAGGCACAGCAAGAGCACTA
GAGTATCTGCACGAAGTTTGTTCACCATCTTTGGTTCACAAGAATATCAAGTCTGCAAAT
ATTGTACTTGATGCAGAACTCAATCCTCATCTATCAGACTGTGGATTGGCAAGTCTAATT
GCTGATGCAGATCAGGCATTGAACCATAATACAGGATCGGGATATGGTGCCCCCGAAGTT
GCTATGTCCGGTCTCTGTACCATAAAAAGTGATGTGTACAGCTTTGGAGTGGTTATGTTG
GAACTTCTTACCGGACGAAAACCTTTTGATAGCGCAAGAACAAGATCTGAACAATCTCTA
GTTAGATGGGCAACACCTCAGCTGCACGATATTGATGCCCTAGCTAAGATGGTTGATCCA
GCACTCGAGGGGCTCTATCCTGTTAAATCTCTATCACGCTTTGCTGATGTAATAGCTCTC
TGTGTCCAGCCTGAGCCCGAGTTCAGGCCACCTATGTCGGAAGTGGTTGAAGCATTAGTT
CGGCTAGTGCAACGAGCAAACATGAGCAAGAGGACATTTGGTGCTGATCAGGGTACTTCA
AGGGGTGAAACAGATGGCCCGGACTATGAACCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400016186
PEP Infomation

pacid=37460874 transcript=PGSC0003DMT400023732 locus=PGSC0003DMG400009180 ID=PGSC0003DMT400023732.v4.03 annot-version=v4.03
Sequence

MRLLLLLPILIGIFLYCANYAIADTDPNDASALRVLYSSLNSPGQLTKWNANGGDPCGES
WTGITCSGNRVTEIKISGLGLSGSLGYQLASLTSVTNFDISNNNLGNQLPYQLPPNVQRL
NLAANGFNGALPYSVSQMTSLRYLNVSHNQIQGQVTVAFDSLSSLNTLDFSFNAMTGDLP
QSFKALTSMNKMYLQNNQFTGTIDILANLPLDDLNVENNRFTGWVPDHLKGITKSNGNSW
NSGSAPPPPPGTPPASRPHHKSGGNNSPTDGASSGDGGGKSGIRGGAIAGIVISVLVVGA
IVAFFVIKKRLKRSSTDIERHDNQPFAPLAPPQEVHELKTNEASSAPIVKVFEAPAVVNL
RPPPIERHKSFDEVDIAAKPIVPPKKVNTAKIDARQYSIADLQMATDSFNVDNLIGEGSF
GRVYRAQFDDGKVLAVKKINSSALQNPEDFLDIVSEISRLHHPNVTELVGYCSEHGQHLL
VYEFHKNGSLHDFLHLLDEESKPLTWNSRVKIALGTARALEYLHEVCSPSLVHKNIKSAN
IVLDAELNPHLSDCGLASLIADADQALNHNTGSGYGAPEVAMSGLCTIKSDVYSFGVVML
ELLTGRKPFDSARTRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIAL
CVQPEPEFRPPMSEVVEALVRLVQRANMSKRTFGADQGTSRGETDGPDYEP*

Transcript Sequence

Transcript ID

PGSC0003DMT400023732
Transcript Infomation

pacid=37460874 locus=PGSC0003DMG400009180 ID=PGSC0003DMT400023732.v4.03 annot-version=v4.03
Sequence

ATGAGGTTGCTGCTGCTGCTGCCGATACTCATCGGCATTTTTCTGTATTGTGCTAATTAT
GCCATTGCCGACACAGATCCAAATGACGCATCTGCTCTGAGAGTTCTGTATAGCAGCCTA
AATTCACCTGGACAGCTAACAAAATGGAATGCCAATGGTGGTGATCCTTGTGGAGAGTCC
TGGACAGGTATTACTTGCTCGGGCAATAGAGTTACTGAAATCAAGATATCAGGTCTTGGA
CTCTCTGGTTCACTGGGCTACCAATTAGCAAGTCTTACATCGGTGACTAATTTTGACATA
AGTAATAACAATTTGGGAAACCAGTTACCTTATCAGCTTCCTCCAAATGTGCAAAGATTA
AACCTTGCTGCTAATGGTTTTAATGGTGCCCTTCCATATTCCGTTTCGCAGATGACTTCC
CTCCGATACTTAAATGTCAGTCATAATCAAATTCAAGGACAAGTGACTGTCGCGTTCGAC
TCTCTGTCTTCTCTCAATACATTGGATTTCTCATTCAATGCTATGACGGGTGATCTTCCT
CAAAGCTTCAAGGCACTGACTAGTATGAATAAAATGTATTTGCAGAACAACCAGTTTACA
GGAACTATTGATATCTTAGCCAATCTTCCTCTTGATGATTTGAATGTTGAGAACAACCGT
TTTACTGGCTGGGTTCCTGATCACTTGAAAGGGATCACGAAATCAAATGGTAACTCATGG
AACTCAGGATCTGCACCCCCTCCTCCACCTGGCACACCCCCTGCAAGCAGGCCGCACCAC
AAATCTGGAGGCAATAATAGCCCTACTGATGGTGCAAGCAGTGGTGATGGTGGTGGTAAA
TCGGGGATAAGGGGTGGAGCCATTGCAGGCATAGTGATATCTGTTCTAGTTGTTGGGGCA
ATTGTAGCATTCTTTGTTATCAAGAAGAGATTGAAGCGGTCATCGACGGACATTGAGAGA
CATGATAATCAGCCATTTGCTCCTCTTGCTCCCCCCCAGGAAGTACATGAATTGAAAACT
AATGAAGCTTCCTCTGCGCCAATAGTGAAAGTATTTGAAGCTCCTGCAGTAGTAAATCTA
AGACCTCCACCTATTGAACGCCACAAGTCATTTGACGAAGTTGACATAGCAGCAAAACCA
ATTGTCCCACCCAAGAAAGTTAATACAGCTAAAATAGATGCAAGACAATATTCAATCGCA
GACCTACAGATGGCGACTGATAGCTTCAATGTTGATAACCTTATTGGCGAGGGATCATTT
GGGCGTGTTTATAGGGCTCAGTTTGATGATGGAAAGGTTCTTGCAGTCAAGAAAATCAAC
TCTTCTGCACTCCAGAATCCTGAAGATTTTCTCGATATTGTTTCTGAGATATCACGGTTG
CACCATCCAAATGTTACTGAGCTGGTTGGATATTGTTCAGAGCACGGGCAGCATCTGCTG
GTTTATGAATTCCACAAAAATGGTTCTCTGCATGATTTCCTGCATCTGTTAGATGAGGAA
AGCAAGCCTCTAACATGGAATAGCCGAGTTAAGATTGCACTAGGCACAGCAAGAGCACTA
GAGTATCTGCACGAAGTTTGTTCACCATCTTTGGTTCACAAGAATATCAAGTCTGCAAAT
ATTGTACTTGATGCAGAACTCAATCCTCATCTATCAGACTGTGGATTGGCAAGTCTAATT
GCTGATGCAGATCAGGCATTGAACCATAATACAGGATCGGGATATGGTGCCCCCGAAGTT
GCTATGTCCGGTCTCTGTACCATAAAAAGTGATGTGTACAGCTTTGGAGTGGTTATGTTG
GAACTTCTTACCGGACGAAAACCTTTTGATAGCGCAAGAACAAGATCTGAACAATCTCTA
GTTAGATGGGCAACACCTCAGCTGCACGATATTGATGCCCTAGCTAAGATGGTTGATCCA
GCACTCGAGGGGCTCTATCCTGTTAAATCTCTATCACGCTTTGCTGATGTAATAGCTCTC
TGTGTCCAGCCTGAGCCCGAGTTCAGGCCACCTATGTCGGAAGTGGTTGAAGCATTAGTT
CGGCTAGTGCAACGAGCAAACATGAGCAAGAGGACATTTGGTGCTGATCAGGGTACTTCA
AGGGGTGAAACAGATGGCCCGGACTATGAACCATAG