Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023727
CDS Infomation

pacid=37459870 polypeptide=PGSC0003DMP400016183 locus=PGSC0003DMG400009178 ID=PGSC0003DMT400023727.v4.03 annot-version=v4.03
Sequence

ATGACACGTGTCAAAGATTTTTTCGCCGAAATGTTGGATTCCGGCAAACAAATTGATTTT
TCTAAAAGGAAGAAAAAAATCTACTTGGCCATTGTTGCCTCAGTCCTGCTCGTTGCAGCA
GTAATTGGAATAGTCGCCGGAGTTAAATCTCGTTCGAATAACTCCGACGATCATGCAGAC
ATAATGGCCATATCCTCTTCAGCTCATGCCATCGTAAAATCTGCGTGTAGCAACACTCTA
CACCCCGAACTGTGTTACTCTGCAATTGTAAATGTTACTGATTTCTCAAAAAAAGTAACA
AGCCAAAAAGATGTGATTGAATTGTCCTTGAATATCACTGTCAAGGCCGTTCGACGCAAC
TACTATGCAGTCAAGGAACTCATCAAAACTAGGAAAGGTTTAACCCCACGGGAAAAGGTT
GCGCTGCATGACTGCCTGGAGACGATGGACGAGACACTCGACGAGCTCCACACTGCTGTA
GCAGATCTGGAACTTTATCCCAACAAAAAATCATTGAAAGAACACGCTGAAGACCTGAAA
ACTCTAATAAGTTCCGCAATTACAAACCAGGAAACTTGCCTCGACGGTTTCTCTCACGAT
GAGGCCGATAAAAAGGTCCGCAAGGTTTTGCTGAAAGGCCAAAAGCACGTGGAAAAAATG
TGCAGCAATGCTTTAGCTATGATCTGTAACATGACCAATACCGACATTGCAAATGAGATG
AAATTATCGGGCAATAGGAAGTTAGTAGAGGATAGCGGCGAGTGGCCGGAGTGGTTGTCC
GCCGGCGACAGGAGATTGTTGCAGTCGTCGACGGTGACGCCGGATGTGGTTGTGGCGGCC
GACGGAAGCGGAGATTACAAAACGGTGTCGGAGGCGGTAGCGAAAGCGCCGGAGAAGAGT
AGCAAGAGGTATGTGATTAGGATAAAAGCAGGTGTTTACAGGGAAAATGTGGATGTGCCG
AAGAAGAAGACGAATATTATGTTTATGGGAGATGGCAGAAGCAATACAATAATTACCGCA
AGTAGGAATGTGCAAGATGGCAGCACTACCTTCCACTCTGCTACAGTTGCCGCGGTGGGG
GAAAAGTTCTTGGCCCGGGACATAACCTTCCAAAACACAGCAGGAGCCTCGAAGCATCAA
GCCGTGGCACTTCGCGTGGGGTCTGATTTGTCCGCATTTTATAAATGTGACATATTAGCT
TATCAGGACACCCTCTATGTCCACTCCAATCGTCAATTCTTTGTACAATGTTTAGTTGCT
GGTACCGTTGATTTTATTTTTGGAAATGGTGCTGCTGTTTTACAAGACTGTGATATTCAC
GCCAGGCGTCCTGGTTCGGGCCAAAAGAACATGGTTACTGCCCAAGGAAGAACTGACCCC
AACCAGAACACTGGTATTGTTATCCAGAAATGTAGAATTGGTGCAACGTCTGATTTGAGA
CCGGTGCAGAAGAGTTTCCCTACGTATCTAGGAAGGCCGTGGAAAGAGTATTCGAGGACT
GTGATCATGCAATCGTCGATTACTGACGTGATTCAGCCTGCTGGATGGCATGAATGGAAT
GGGAATTTTGCATTGAATACTCTGTTTTATGGTGAGTATGCAAATACAGGGGCAGGAGCA
GCGACCTCAGGAAGGGTTAAATGGAAAGGGCATAAGGTAATTACAAGTTCAACTGAGGCC
CAAGCTTATACTCCTGGCAGTTTCATTGCTGGAGGTAGTTGGTTGAGCTCCACTGGCTTC
CCTTTTTCTCTTGGTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016183
PEP Infomation

pacid=37459870 transcript=PGSC0003DMT400023727 locus=PGSC0003DMG400009178 ID=PGSC0003DMT400023727.v4.03 annot-version=v4.03
Sequence

MTRVKDFFAEMLDSGKQIDFSKRKKKIYLAIVASVLLVAAVIGIVAGVKSRSNNSDDHAD
IMAISSSAHAIVKSACSNTLHPELCYSAIVNVTDFSKKVTSQKDVIELSLNITVKAVRRN
YYAVKELIKTRKGLTPREKVALHDCLETMDETLDELHTAVADLELYPNKKSLKEHAEDLK
TLISSAITNQETCLDGFSHDEADKKVRKVLLKGQKHVEKMCSNALAMICNMTNTDIANEM
KLSGNRKLVEDSGEWPEWLSAGDRRLLQSSTVTPDVVVAADGSGDYKTVSEAVAKAPEKS
SKRYVIRIKAGVYRENVDVPKKKTNIMFMGDGRSNTIITASRNVQDGSTTFHSATVAAVG
EKFLARDITFQNTAGASKHQAVALRVGSDLSAFYKCDILAYQDTLYVHSNRQFFVQCLVA
GTVDFIFGNGAAVLQDCDIHARRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLR
PVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALNTLFYGEYANTGAGA
ATSGRVKWKGHKVITSSTEAQAYTPGSFIAGGSWLSSTGFPFSLGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400023727
Transcript Infomation

pacid=37459870 locus=PGSC0003DMG400009178 ID=PGSC0003DMT400023727.v4.03 annot-version=v4.03
Sequence

ATGACACGTGTCAAAGATTTTTTCGCCGAAATGTTGGATTCCGGCAAACAAATTGATTTT
TCTAAAAGGAAGAAAAAAATCTACTTGGCCATTGTTGCCTCAGTCCTGCTCGTTGCAGCA
GTAATTGGAATAGTCGCCGGAGTTAAATCTCGTTCGAATAACTCCGACGATCATGCAGAC
ATAATGGCCATATCCTCTTCAGCTCATGCCATCGTAAAATCTGCGTGTAGCAACACTCTA
CACCCCGAACTGTGTTACTCTGCAATTGTAAATGTTACTGATTTCTCAAAAAAAGTAACA
AGCCAAAAAGATGTGATTGAATTGTCCTTGAATATCACTGTCAAGGCCGTTCGACGCAAC
TACTATGCAGTCAAGGAACTCATCAAAACTAGGAAAGGTTTAACCCCACGGGAAAAGGTT
GCGCTGCATGACTGCCTGGAGACGATGGACGAGACACTCGACGAGCTCCACACTGCTGTA
GCAGATCTGGAACTTTATCCCAACAAAAAATCATTGAAAGAACACGCTGAAGACCTGAAA
ACTCTAATAAGTTCCGCAATTACAAACCAGGAAACTTGCCTCGACGGTTTCTCTCACGAT
GAGGCCGATAAAAAGGTCCGCAAGGTTTTGCTGAAAGGCCAAAAGCACGTGGAAAAAATG
TGCAGCAATGCTTTAGCTATGATCTGTAACATGACCAATACCGACATTGCAAATGAGATG
AAATTATCGGGCAATAGGAAGTTAGTAGAGGATAGCGGCGAGTGGCCGGAGTGGTTGTCC
GCCGGCGACAGGAGATTGTTGCAGTCGTCGACGGTGACGCCGGATGTGGTTGTGGCGGCC
GACGGAAGCGGAGATTACAAAACGGTGTCGGAGGCGGTAGCGAAAGCGCCGGAGAAGAGT
AGCAAGAGGTATGTGATTAGGATAAAAGCAGGTGTTTACAGGGAAAATGTGGATGTGCCG
AAGAAGAAGACGAATATTATGTTTATGGGAGATGGCAGAAGCAATACAATAATTACCGCA
AGTAGGAATGTGCAAGATGGCAGCACTACCTTCCACTCTGCTACAGTTGCCGCGGTGGGG
GAAAAGTTCTTGGCCCGGGACATAACCTTCCAAAACACAGCAGGAGCCTCGAAGCATCAA
GCCGTGGCACTTCGCGTGGGGTCTGATTTGTCCGCATTTTATAAATGTGACATATTAGCT
TATCAGGACACCCTCTATGTCCACTCCAATCGTCAATTCTTTGTACAATGTTTAGTTGCT
GGTACCGTTGATTTTATTTTTGGAAATGGTGCTGCTGTTTTACAAGACTGTGATATTCAC
GCCAGGCGTCCTGGTTCGGGCCAAAAGAACATGGTTACTGCCCAAGGAAGAACTGACCCC
AACCAGAACACTGGTATTGTTATCCAGAAATGTAGAATTGGTGCAACGTCTGATTTGAGA
CCGGTGCAGAAGAGTTTCCCTACGTATCTAGGAAGGCCGTGGAAAGAGTATTCGAGGACT
GTGATCATGCAATCGTCGATTACTGACGTGATTCAGCCTGCTGGATGGCATGAATGGAAT
GGGAATTTTGCATTGAATACTCTGTTTTATGGTGAGTATGCAAATACAGGGGCAGGAGCA
GCGACCTCAGGAAGGGTTAAATGGAAAGGGCATAAGGTAATTACAAGTTCAACTGAGGCC
CAAGCTTATACTCCTGGCAGTTTCATTGCTGGAGGTAGTTGGTTGAGCTCCACTGGCTTC
CCTTTTTCTCTTGGTCTTTGA