Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023725
CDS Infomation

pacid=37461294 polypeptide=PGSC0003DMP400016181 locus=PGSC0003DMG400009177 ID=PGSC0003DMT400023725.v4.03 annot-version=v4.03
Sequence

ATGGATACAATCAAATCTTTCAAAGGCTATGGCAAAGTGGATGAGTTGGAAGAACAAGCT
TTCAGGAAGAAAACCCGTAAGCGTCTCATTATCTTAATTGTCTCTGCCATTCTTCTCCTT
ATTGCAGTTGTAGGCATAGTTGTTGGAACTGTTGTTCACAAAAACAACGATTCGAAACAA
ACCTCTTCTACTGCTCAATCCCTGGAAGTTCTCTGTAGCTTAACTGAGTACAAAGATTCG
TGCTTATCAAGCTTATCATCCTCAAATATCACTGATCCAGAAACGCTGTTTGTACTTTCT
TTGAAAATCGCCATGGATGCGGTCAAGAATATGTCTTCTGGACCGCAGAATTGGGGGAAA
TTGACTAAAGAACCCAAAGTACAAAGGGCATTGAAAGTCTGCGAGACTGTATTCGACGAT
GCAATTGATAAACTTAACGACTCTGTTTCATCGGTGCAAGTGAACGGAGGCGCAAAACTG
CTTTCAGGACCCAAAATCGATGATCTCAGAACTTGGTTGAGCTCGACGCTTACAGATCAG
GAGACTTGCTTGGACGCACTCGAAGAAATGAATGCCACATTCGTGAACGACGCTAAGCTG
TTAATGAAAAATTCGACTGAATTTACCAGCAACAGTTTAGCTATTGTGGCTAACATTTTT
GGGATTCTAGGTAAATTCAATATTCCGATTCACCGGAAATTGTTGAACATTGGGGAATTC
CCGGAATGGGTAGCAGCGGCTGACCGGAGACTTATGCAGGAGGTTAGTCCGAAACCGGAC
GTGACAGTGGCAAGTGATGGTTCCGGAAATGTTACGACTATTGGAGAAGCAGTGAAAATG
GTGCCGAAAAAGAGTAAAACGATATTCGTGATATATGTGAAGGAAGGTGAATATGTTGAG
ACAGTGAGAATGGATAAGTCTCTTTGGAATGTCATGATGTACGGCGATGGCAAAACTAAG
ACCATTATTTCCGGCAGCTTGAACTTCATCGATGGAACTCCCACTTTTGAGACGGCCACA
TTTGCTGTTGCTGGTAGAGGCTTCATTGCCAGAGACATAACATTCAAGAACACCGCTGGG
GCCGCAAAGCACCAGGCAGTGGCCATGCGTTCAGGGTCCGATCAATCTGTATTTTATCGA
TGCTCCTTTGATGCCTTCCAGGACACCCTCTATGCTCACTCCAACCGTCAATTTTACCGC
GAATGTGACATTACAGGTACAATCGATTTCATGTTTGGTAACGCTGCGGTTGTTTTCCAA
AGTTGTAAAATCCAGCCCAGACAACCATTACCCAATCAGTTTGTGACCATTACGGCCCAA
GGCAAAAAAGACCCAAATCAGAATACAGGCATGTCTATTCAAAAGTGTGATCTTTCACCA
TTGGATGATCTGAAAGCTCTAACATACTTGGGCAGGCCCTGGAAGGACTACTCTACAACA
GTAATCATGGAGTCCACTATTGGTGCATTCTTGAATCCTCTTGGTTGGATTGAATGGGTC
AGTGGTGTGGAGCCAGCCAACACCATTTTCTATGCTGAGTATGCCAACACCGGCCCAGGT
GCATCTGTGACCCATAGGGTCACATGGGCCGGTTATAAGTCCAGCATTACCTCAGACCAG
GCGGCCCAATACACCGTACCGTCTCTCATACAAGGCGATACTTGGTTACCACAGACAGCA
GTTGTCTTTGATTCTACCTTGCAAACATAA

Peptide Sequence

PEP ID

PGSC0003DMP400016181
PEP Infomation

pacid=37461294 transcript=PGSC0003DMT400023725 locus=PGSC0003DMG400009177 ID=PGSC0003DMT400023725.v4.03 annot-version=v4.03
Sequence

MDTIKSFKGYGKVDELEEQAFRKKTRKRLIILIVSAILLLIAVVGIVVGTVVHKNNDSKQ
TSSTAQSLEVLCSLTEYKDSCLSSLSSSNITDPETLFVLSLKIAMDAVKNMSSGPQNWGK
LTKEPKVQRALKVCETVFDDAIDKLNDSVSSVQVNGGAKLLSGPKIDDLRTWLSSTLTDQ
ETCLDALEEMNATFVNDAKLLMKNSTEFTSNSLAIVANIFGILGKFNIPIHRKLLNIGEF
PEWVAAADRRLMQEVSPKPDVTVASDGSGNVTTIGEAVKMVPKKSKTIFVIYVKEGEYVE
TVRMDKSLWNVMMYGDGKTKTIISGSLNFIDGTPTFETATFAVAGRGFIARDITFKNTAG
AAKHQAVAMRSGSDQSVFYRCSFDAFQDTLYAHSNRQFYRECDITGTIDFMFGNAAVVFQ
SCKIQPRQPLPNQFVTITAQGKKDPNQNTGMSIQKCDLSPLDDLKALTYLGRPWKDYSTT
VIMESTIGAFLNPLGWIEWVSGVEPANTIFYAEYANTGPGASVTHRVTWAGYKSSITSDQ
AAQYTVPSLIQGDTWLPQTAVVFDSTLQT*

Transcript Sequence

Transcript ID

PGSC0003DMT400023725
Transcript Infomation

pacid=37461294 locus=PGSC0003DMG400009177 ID=PGSC0003DMT400023725.v4.03 annot-version=v4.03
Sequence

ATGGATACAATCAAATCTTTCAAAGGCTATGGCAAAGTGGATGAGTTGGAAGAACAAGCT
TTCAGGAAGAAAACCCGTAAGCGTCTCATTATCTTAATTGTCTCTGCCATTCTTCTCCTT
ATTGCAGTTGTAGGCATAGTTGTTGGAACTGTTGTTCACAAAAACAACGATTCGAAACAA
ACCTCTTCTACTGCTCAATCCCTGGAAGTTCTCTGTAGCTTAACTGAGTACAAAGATTCG
TGCTTATCAAGCTTATCATCCTCAAATATCACTGATCCAGAAACGCTGTTTGTACTTTCT
TTGAAAATCGCCATGGATGCGGTCAAGAATATGTCTTCTGGACCGCAGAATTGGGGGAAA
TTGACTAAAGAACCCAAAGTACAAAGGGCATTGAAAGTCTGCGAGACTGTATTCGACGAT
GCAATTGATAAACTTAACGACTCTGTTTCATCGGTGCAAGTGAACGGAGGCGCAAAACTG
CTTTCAGGACCCAAAATCGATGATCTCAGAACTTGGTTGAGCTCGACGCTTACAGATCAG
GAGACTTGCTTGGACGCACTCGAAGAAATGAATGCCACATTCGTGAACGACGCTAAGCTG
TTAATGAAAAATTCGACTGAATTTACCAGCAACAGTTTAGCTATTGTGGCTAACATTTTT
GGGATTCTAGGTAAATTCAATATTCCGATTCACCGGAAATTGTTGAACATTGGGGAATTC
CCGGAATGGGTAGCAGCGGCTGACCGGAGACTTATGCAGGAGGTTAGTCCGAAACCGGAC
GTGACAGTGGCAAGTGATGGTTCCGGAAATGTTACGACTATTGGAGAAGCAGTGAAAATG
GTGCCGAAAAAGAGTAAAACGATATTCGTGATATATGTGAAGGAAGGTGAATATGTTGAG
ACAGTGAGAATGGATAAGTCTCTTTGGAATGTCATGATGTACGGCGATGGCAAAACTAAG
ACCATTATTTCCGGCAGCTTGAACTTCATCGATGGAACTCCCACTTTTGAGACGGCCACA
TTTGCTGTTGCTGGTAGAGGCTTCATTGCCAGAGACATAACATTCAAGAACACCGCTGGG
GCCGCAAAGCACCAGGCAGTGGCCATGCGTTCAGGGTCCGATCAATCTGTATTTTATCGA
TGCTCCTTTGATGCCTTCCAGGACACCCTCTATGCTCACTCCAACCGTCAATTTTACCGC
GAATGTGACATTACAGGTACAATCGATTTCATGTTTGGTAACGCTGCGGTTGTTTTCCAA
AGTTGTAAAATCCAGCCCAGACAACCATTACCCAATCAGTTTGTGACCATTACGGCCCAA
GGCAAAAAAGACCCAAATCAGAATACAGGCATGTCTATTCAAAAGTGTGATCTTTCACCA
TTGGATGATCTGAAAGCTCTAACATACTTGGGCAGGCCCTGGAAGGACTACTCTACAACA
GTAATCATGGAGTCCACTATTGGTGCATTCTTGAATCCTCTTGGTTGGATTGAATGGGTC
AGTGGTGTGGAGCCAGCCAACACCATTTTCTATGCTGAGTATGCCAACACCGGCCCAGGT
GCATCTGTGACCCATAGGGTCACATGGGCCGGTTATAAGTCCAGCATTACCTCAGACCAG
GCGGCCCAATACACCGTACCGTCTCTCATACAAGGCGATACTTGGTTACCACAGACAGCA
GTTGTCTTTGATTCTACCTTGCAAACATAA