Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023675
CDS Infomation

pacid=37459096 polypeptide=PGSC0003DMP400016146 locus=PGSC0003DMG400009159 ID=PGSC0003DMT400023675.v4.03 annot-version=v4.03
Sequence

ATGGCGTCCACCCCTTCTCCTCACACTGCCGCCACAGCCCATCTCAATTCTCTCCTCTCT
TCTTCTTCTTCCGTCAATCACAACAAACCTTCAAATCTCTCTTTCCTCCATGCCTCCTCA
AATCCATCTTCCATCAAACTCCTTCACTCTGTTTCTGCGTCGTCGTCATTTCCACCATCA
ATTTCTTCTTCTTCTTCAACGACGTCGATTTGTAATGTCCTGAAAACTGTTGAATCTGCT
GACATCTCCCTCTCTAGAGATCTTCACGGCGTCGTTTCGACTTCCAAACCGACCATTCTC
GTATCCGAGAAGCTTGGAGAGGCGGGTTTAGATTTGCTGAGGAGTTTCGGCAACGTGGAT
TGTTCTTACGACTTGTCTCCTCAGGATCTCTGCACTAAGATCTCGCTGTGCGACGCGCTC
ATCGTCCGTAGTGGTACCAAGGTGACCCGTGAGGTGTTTGAGGCTGCTCAAGGAAGACTC
AAGGTCGTCGGGAGAGCTGGTGTTGGCATAGACAATGTGGATCTGCAAGCTGCAACTGAA
TTTGGTTGCCTCGTCGTTAACGCACCCACAGCTAATACTATTGCTGCAGCTGAGCATGGA
ATCGCTTTGCTCACCTCCATGGCCCGTAACGTTGCTCAGTCTGATGCCTCCATGAAAGCT
GGAAAATGGCTGCGCAGCAAGTACGTGGGTGTTTCTCTTGTTGGGAAAACCTTAGCTATT
ATGGGATTTGGTAAAGTTGGTTCCGAGGTTGCTAGACGTGCAAAAGGCCTCGGTATGCAT
GTTATTGCCCATGATCCTTATGCTCCAGCTGACAGAGCTCGTGCTATTGGAGTCGATTTG
GTTTCATTTGAGCAGGCCATATCTACTGCTGACTTCATCTCACTCCACATGCCTCTTACA
CCTGCTACGAACAAGGTATTCAATGATGACACATTTGCAAAGATGAAGAAAGGAGTTAGA
CTAATAAACGTTGCTCGAGGGGGTGTTATTGACGAGGATGCATTAGTTAGAGCTCTTGAC
AGTGGAATAGTTGCTCAGGCAGCACTTGATGTGTTCACTGTGGAGCCCCCTCCAAAAGAT
AGCAAACTAGTGCAGCATGAGAATGTTACTGTTACACCTCATCTTGGAGCTAGCACAAAA
GAAGCACAGGAAGGAGTTGCAATTGAAATAGCTGAGGCTGTTGTTGGTGCTCTAAATGGG
GAACTTTCTGCTACCGCTGTGAATGCTCCGATGGTCCCTCCTGAGGTTTTGTCCGAGTTG
GCTCCTTACGTTGTGCTTGCTGAGAAACTGGGTAGATTAGCAGTACAGCTAGTGACTGGT
GGAAGTGGGATTCAGAGTGTGAAAGTGGTTTACAAATCAGCTAGGGACCCTGACAGCTTG
GACACTAGACTTCTCCGAGCCATGGTAACAAAAGGCATTATTGAGCCTATATCTGATACA
ATCATCAACCTTGTAAATGCAGATTTCAGTGCAAAGCAGAAGGGTCTTCGCATTAGTGAA
GAAAGGATTATTGTTGATTCATCTCCAGAGTACCCTGTTGAGTCAATCCAGGTGCAGATT
AGCAATGTGCAATCAAGATTTGCAAGTGCGTTATCAGAGAATGGAAACATCAGCATTGAG
GGTAAAGTGAAGTATGGAGTTCCCCATCTTACACGTGTTGGACCATTTAGCGTTGATGTG
AGCTTGGAGGGTAACCTCATCCTTTGCAAACAAGTGGATCAACCTGGTATGATAGGGAAA
GTTGGGAACATACTTGGTGAGAGTAATGTGAATGTGAGTTTTATGAGTGTTGGGAGAACG
GTGAAGGGAAAGCAGGCAATTATGGCAATTGGAGTAGACGAAGAACCAGACAAGGATACT
CAGAAGAAGATTGGAGAGGTGTCTGCGGTTGAAGAATTTGTCTTCCTTAAACTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400016146
PEP Infomation

pacid=37459096 transcript=PGSC0003DMT400023675 locus=PGSC0003DMG400009159 ID=PGSC0003DMT400023675.v4.03 annot-version=v4.03
Sequence

MASTPSPHTAATAHLNSLLSSSSSVNHNKPSNLSFLHASSNPSSIKLLHSVSASSSFPPS
ISSSSSTTSICNVLKTVESADISLSRDLHGVVSTSKPTILVSEKLGEAGLDLLRSFGNVD
CSYDLSPQDLCTKISLCDALIVRSGTKVTREVFEAAQGRLKVVGRAGVGIDNVDLQAATE
FGCLVVNAPTANTIAAAEHGIALLTSMARNVAQSDASMKAGKWLRSKYVGVSLVGKTLAI
MGFGKVGSEVARRAKGLGMHVIAHDPYAPADRARAIGVDLVSFEQAISTADFISLHMPLT
PATNKVFNDDTFAKMKKGVRLINVARGGVIDEDALVRALDSGIVAQAALDVFTVEPPPKD
SKLVQHENVTVTPHLGASTKEAQEGVAIEIAEAVVGALNGELSATAVNAPMVPPEVLSEL
APYVVLAEKLGRLAVQLVTGGSGIQSVKVVYKSARDPDSLDTRLLRAMVTKGIIEPISDT
IINLVNADFSAKQKGLRISEERIIVDSSPEYPVESIQVQISNVQSRFASALSENGNISIE
GKVKYGVPHLTRVGPFSVDVSLEGNLILCKQVDQPGMIGKVGNILGESNVNVSFMSVGRT
VKGKQAIMAIGVDEEPDKDTQKKIGEVSAVEEFVFLKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400023675
Transcript Infomation

pacid=37459096 locus=PGSC0003DMG400009159 ID=PGSC0003DMT400023675.v4.03 annot-version=v4.03
Sequence

ATGGCGTCCACCCCTTCTCCTCACACTGCCGCCACAGCCCATCTCAATTCTCTCCTCTCT
TCTTCTTCTTCCGTCAATCACAACAAACCTTCAAATCTCTCTTTCCTCCATGCCTCCTCA
AATCCATCTTCCATCAAACTCCTTCACTCTGTTTCTGCGTCGTCGTCATTTCCACCATCA
ATTTCTTCTTCTTCTTCAACGACGTCGATTTGTAATGTCCTGAAAACTGTTGAATCTGCT
GACATCTCCCTCTCTAGAGATCTTCACGGCGTCGTTTCGACTTCCAAACCGACCATTCTC
GTATCCGAGAAGCTTGGAGAGGCGGGTTTAGATTTGCTGAGGAGTTTCGGCAACGTGGAT
TGTTCTTACGACTTGTCTCCTCAGGATCTCTGCACTAAGATCTCGCTGTGCGACGCGCTC
ATCGTCCGTAGTGGTACCAAGGTGACCCGTGAGGTGTTTGAGGCTGCTCAAGGAAGACTC
AAGGTCGTCGGGAGAGCTGGTGTTGGCATAGACAATGTGGATCTGCAAGCTGCAACTGAA
TTTGGTTGCCTCGTCGTTAACGCACCCACAGCTAATACTATTGCTGCAGCTGAGCATGGA
ATCGCTTTGCTCACCTCCATGGCCCGTAACGTTGCTCAGTCTGATGCCTCCATGAAAGCT
GGAAAATGGCTGCGCAGCAAGTACGTGGGTGTTTCTCTTGTTGGGAAAACCTTAGCTATT
ATGGGATTTGGTAAAGTTGGTTCCGAGGTTGCTAGACGTGCAAAAGGCCTCGGTATGCAT
GTTATTGCCCATGATCCTTATGCTCCAGCTGACAGAGCTCGTGCTATTGGAGTCGATTTG
GTTTCATTTGAGCAGGCCATATCTACTGCTGACTTCATCTCACTCCACATGCCTCTTACA
CCTGCTACGAACAAGGTATTCAATGATGACACATTTGCAAAGATGAAGAAAGGAGTTAGA
CTAATAAACGTTGCTCGAGGGGGTGTTATTGACGAGGATGCATTAGTTAGAGCTCTTGAC
AGTGGAATAGTTGCTCAGGCAGCACTTGATGTGTTCACTGTGGAGCCCCCTCCAAAAGAT
AGCAAACTAGTGCAGCATGAGAATGTTACTGTTACACCTCATCTTGGAGCTAGCACAAAA
GAAGCACAGGAAGGAGTTGCAATTGAAATAGCTGAGGCTGTTGTTGGTGCTCTAAATGGG
GAACTTTCTGCTACCGCTGTGAATGCTCCGATGGTCCCTCCTGAGGTTTTGTCCGAGTTG
GCTCCTTACGTTGTGCTTGCTGAGAAACTGGGTAGATTAGCAGTACAGCTAGTGACTGGT
GGAAGTGGGATTCAGAGTGTGAAAGTGGTTTACAAATCAGCTAGGGACCCTGACAGCTTG
GACACTAGACTTCTCCGAGCCATGGTAACAAAAGGCATTATTGAGCCTATATCTGATACA
ATCATCAACCTTGTAAATGCAGATTTCAGTGCAAAGCAGAAGGGTCTTCGCATTAGTGAA
GAAAGGATTATTGTTGATTCATCTCCAGAGTACCCTGTTGAGTCAATCCAGGTGCAGATT
AGCAATGTGCAATCAAGATTTGCAAGTGCGTTATCAGAGAATGGAAACATCAGCATTGAG
GGTAAAGTGAAGTATGGAGTTCCCCATCTTACACGTGTTGGACCATTTAGCGTTGATGTG
AGCTTGGAGGGTAACCTCATCCTTTGCAAACAAGTGGATCAACCTGGTATGATAGGGAAA
GTTGGGAACATACTTGGTGAGAGTAATGTGAATGTGAGTTTTATGAGTGTTGGGAGAACG
GTGAAGGGAAAGCAGGCAATTATGGCAATTGGAGTAGACGAAGAACCAGACAAGGATACT
CAGAAGAAGATTGGAGAGGTGTCTGCGGTTGAAGAATTTGTCTTCCTTAAACTATAG