Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023662
CDS Infomation

pacid=37460915 polypeptide=PGSC0003DMP400016136 locus=PGSC0003DMG400009155 ID=PGSC0003DMT400023662.v4.03 annot-version=v4.03
Sequence

ATGGCCACTTCTAAAAATGGAGGTGAATGGACTGGGGATTCGCGGTTTTTCATTGTGAAT
TACCAAACTGGAGGAATTTTGGACCTCATGCGCTTCGTCCAATCAGGTAACAGTGATAAA
TTTCTTCACTATTCCGACGGCGTTACCGGTGTGCCACGTGGTGGTGGCCATCCTGATCAT
AGATGGGTTATATTTGTATCCATTATAGTGCGGAAAATAATCGCCATTTTCGGTAAACCC
ATGGAGTGGTTTGGGTATCTCCTCGAGTTCATCCTCAACCTTCTCTCTCTCAATGGCAAC
TTTTTTGGCCTTTTCTACAATATCTTGCATGGAAACGTGGTGATGCCACAGAGAGGGTCA
GAAATGTTTATAAGTGCTATTGGGCATTTAGATGGGCGTATAGACTTATACAAGAGTGAG
ACGTTAACCAAGGAAATTGGAGAGCCTGATTTCTGGCAGAAAAATATTCAACTTGGAATA
GGACACAGAGTCCTTATGGACCTCTGTATGATGGCTTCAAAGTTGGCCTACGAGAATGCA
AAGGTTGTTCAGAATGTCGTAAATATTCACTGGAAGATGCATTTTGTGGATTTCTACAAT
TGTTGGAATGATTTCGAGAAAGAGATGTCCACCCAGGTTTTTATATTGTGCGATAAGCCA
AAAGATGCAAACTTGATAGTCATCAGCTTCAGGGGCACGGAGCCTTTTGATGCTGATGAC
TGGATCACTGATTTTGACTATTCTTGGTATGAGATTCCAAAACTTGGCAAAGTACACATG
GGTTTCTTGGAAGCCTTAGGTTTAGGGAGCAGAGCTAAAGCCTCTACTTTTCATGAACAA
CTGTTCATGAATAATCAGAAATTCACCAAGTTAGAGAATGATGCAACTATTGCTCCTTCA
GAAAGTTCTGAATCTTCTACCATGTTCAGTGATTCTGATGCACACAGTGTGTCAGACCAG
TCGCCTGAATCAGATAGGCCTACTGATACCGGCTCAAAGAAGTTCAAACTAGATATGCCA
GAGAGGACGGCATACTATGTTGTCAGAAGTAAACTCAAAAGGTTACTCAATGAGCACAAG
AATGCAAAGTTTGTTGTTACAGGCCATAGCCTTGGTGGAGCATTAGCTATATTATTCCCG
ACAATCCTAGTGCTGCATGAGGAGATGAATGTCATGGAACGATTATTGGGAATATATACA
TATGGGCAGCCAAGGGTTGGGAACAGACAGTTAGGGAGGTTCATGGAAGCCCATTTGGAA
CATCCAGTCCCAAAGTACTTCAGAGTTGTTTATTCCAATGATCTTGTGCCAAGATTACCT
TATGATAATAAAACATTCCTGTTTAAACACTTTGGGATTTGCAAGTACTACAACAGCTTA
TACGTTGAGCAGAATGTCGATGAAGAGCCAAACAGAAACTATTTTGGGCTGCGATTTCTG
ATACCATTGTATCTGAATGCTGGATGGGAGCTCATCAGAAGCTTTACAATGGGTCACATA
TATGGAGCCGAGTATGAGGAGTGCTGGGAATCAGTTGTGCTTCGCGTGCTAGGACTTTTC
CTTCCTGGTATTTCTGCCCACAGCCCAGTTGATTATGTGAACTCCGTCAGACTTGGAACA
GAGAGAAGTACCCAAATGTCGTCTTTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016136
PEP Infomation

pacid=37460915 transcript=PGSC0003DMT400023662 locus=PGSC0003DMG400009155 ID=PGSC0003DMT400023662.v4.03 annot-version=v4.03
Sequence

MATSKNGGEWTGDSRFFIVNYQTGGILDLMRFVQSGNSDKFLHYSDGVTGVPRGGGHPDH
RWVIFVSIIVRKIIAIFGKPMEWFGYLLEFILNLLSLNGNFFGLFYNILHGNVVMPQRGS
EMFISAIGHLDGRIDLYKSETLTKEIGEPDFWQKNIQLGIGHRVLMDLCMMASKLAYENA
KVVQNVVNIHWKMHFVDFYNCWNDFEKEMSTQVFILCDKPKDANLIVISFRGTEPFDADD
WITDFDYSWYEIPKLGKVHMGFLEALGLGSRAKASTFHEQLFMNNQKFTKLENDATIAPS
ESSESSTMFSDSDAHSVSDQSPESDRPTDTGSKKFKLDMPERTAYYVVRSKLKRLLNEHK
NAKFVVTGHSLGGALAILFPTILVLHEEMNVMERLLGIYTYGQPRVGNRQLGRFMEAHLE
HPVPKYFRVVYSNDLVPRLPYDNKTFLFKHFGICKYYNSLYVEQNVDEEPNRNYFGLRFL
IPLYLNAGWELIRSFTMGHIYGAEYEECWESVVLRVLGLFLPGISAHSPVDYVNSVRLGT
ERSTQMSSF*

Transcript Sequence

Transcript ID

PGSC0003DMT400023662
Transcript Infomation

pacid=37460915 locus=PGSC0003DMG400009155 ID=PGSC0003DMT400023662.v4.03 annot-version=v4.03
Sequence

ATGGCCACTTCTAAAAATGGAGGTGAATGGACTGGGGATTCGCGGTTTTTCATTGTGAAT
TACCAAACTGGAGGAATTTTGGACCTCATGCGCTTCGTCCAATCAGGTAACAGTGATAAA
TTTCTTCACTATTCCGACGGCGTTACCGGTGTGCCACGTGGTGGTGGCCATCCTGATCAT
AGATGGGTTATATTTGTATCCATTATAGTGCGGAAAATAATCGCCATTTTCGGTAAACCC
ATGGAGTGGTTTGGGTATCTCCTCGAGTTCATCCTCAACCTTCTCTCTCTCAATGGCAAC
TTTTTTGGCCTTTTCTACAATATCTTGCATGGAAACGTGGTGATGCCACAGAGAGGGTCA
GAAATGTTTATAAGTGCTATTGGGCATTTAGATGGGCGTATAGACTTATACAAGAGTGAG
ACGTTAACCAAGGAAATTGGAGAGCCTGATTTCTGGCAGAAAAATATTCAACTTGGAATA
GGACACAGAGTCCTTATGGACCTCTGTATGATGGCTTCAAAGTTGGCCTACGAGAATGCA
AAGGTTGTTCAGAATGTCGTAAATATTCACTGGAAGATGCATTTTGTGGATTTCTACAAT
TGTTGGAATGATTTCGAGAAAGAGATGTCCACCCAGGTTTTTATATTGTGCGATAAGCCA
AAAGATGCAAACTTGATAGTCATCAGCTTCAGGGGCACGGAGCCTTTTGATGCTGATGAC
TGGATCACTGATTTTGACTATTCTTGGTATGAGATTCCAAAACTTGGCAAAGTACACATG
GGTTTCTTGGAAGCCTTAGGTTTAGGGAGCAGAGCTAAAGCCTCTACTTTTCATGAACAA
CTGTTCATGAATAATCAGAAATTCACCAAGTTAGAGAATGATGCAACTATTGCTCCTTCA
GAAAGTTCTGAATCTTCTACCATGTTCAGTGATTCTGATGCACACAGTGTGTCAGACCAG
TCGCCTGAATCAGATAGGCCTACTGATACCGGCTCAAAGAAGTTCAAACTAGATATGCCA
GAGAGGACGGCATACTATGTTGTCAGAAGTAAACTCAAAAGGTTACTCAATGAGCACAAG
AATGCAAAGTTTGTTGTTACAGGCCATAGCCTTGGTGGAGCATTAGCTATATTATTCCCG
ACAATCCTAGTGCTGCATGAGGAGATGAATGTCATGGAACGATTATTGGGAATATATACA
TATGGGCAGCCAAGGGTTGGGAACAGACAGTTAGGGAGGTTCATGGAAGCCCATTTGGAA
CATCCAGTCCCAAAGTACTTCAGAGTTGTTTATTCCAATGATCTTGTGCCAAGATTACCT
TATGATAATAAAACATTCCTGTTTAAACACTTTGGGATTTGCAAGTACTACAACAGCTTA
TACGTTGAGCAGAATGTCGATGAAGAGCCAAACAGAAACTATTTTGGGCTGCGATTTCTG
ATACCATTGTATCTGAATGCTGGATGGGAGCTCATCAGAAGCTTTACAATGGGTCACATA
TATGGAGCCGAGTATGAGGAGTGCTGGGAATCAGTTGTGCTTCGCGTGCTAGGACTTTTC
CTTCCTGGTATTTCTGCCCACAGCCCAGTTGATTATGTGAACTCCGTCAGACTTGGAACA
GAGAGAAGTACCCAAATGTCGTCTTTTTAG