Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023641
CDS Infomation

pacid=37463805 polypeptide=PGSC0003DMP400016120 locus=PGSC0003DMG400009149 ID=PGSC0003DMT400023641.v4.03 annot-version=v4.03
Sequence

ATGTTGCAGGCTATCCTGGAATTTGCTCCTGAAACATTGTACAATGAGTTGTTAACGAAA
GTTTTCAGGAAGTCATTGTTTCGAATGTCATCTCATCACTGTGCAAACTTCGTCGTGCAG
GCTTTAGCATCTCATGCCAAAAGTCAGGATCATATGGACTTGATCTGGGAGGAGCTTGGG
ACAAAGTTTCGCGATCTTTTTGAAATGGGAAAGTCTGGAGTTGTTGTTTCTGTCCTTGCT
GCAACTCAAAGACTCCACAGCCATGAACATGAGTGTTGTCAGGCCATTGCTGCTGCTGTA
TGCACAGGGGATGAGTTTCCCAAGTGTATTGTCCCCCGAATATTATTTCTTGAAAATTTC
TTTAGCTTAAGAGACAAATCGAACTGGAGTTGGCCACATGGAACAAAGATTCATGTAGTT
GGATCTTTGATTCTGCAGTCGATATTTAGACTTCCCAGTGAACTAATACAGGTGTATGTT
ACTAGTATCACGTCTTTAGAAGAACATCATGTTCTTGAGGCATCGAAAGATCCTAGTGGT
TCACGGGTCATTGAATCTTTTCTAAACTCGAATATATCGGGAAAGCAAAAGAGGAAGTTA
GTTGCCAAGCTTCGGGGACATTTTGGTGAACTCTCAGTGCATCCATTTGGTTCATTTACT
GTTGAAAAGTGCTTCACTGCTAGTAACTTGAATCTGAGAGAGACAATAGTATCGGAAATG
TTACCTCTCCAACCAGAGCTATCCAAGTCTAAGCAGGGACCTTACCTACTGAGGAAACTC
GATATTGATGGATTTGCAAGGCAACCCGACCAGTGGAAGTCGAGACAAGCTTCACAACAA
TCTGCTCTGAAAGAATTTTATGCTACATTTGGACCAAAGGAAACCAAATCATTTGAAAAG
GAGAGCTTTCTTGCTGATACTGTTTCCAAATCAAAGCCAGGAAAGTTAAAAGACATTAGG
AAAGAAATTGAGACAACTTTGGCTTCTGCCAAAACTTCAAATACCCCCTTCTTGGCTCAT
CAGGTTTCAAAAAAAGTGAAAAGGTCTAAAGACGAGAAGAAAAGGCATAGGAAAGATGGC
GAGTCAGAATCTAAAAGAAAGAAGATCAAAGTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016120
PEP Infomation

pacid=37463805 transcript=PGSC0003DMT400023641 locus=PGSC0003DMG400009149 ID=PGSC0003DMT400023641.v4.03 annot-version=v4.03
Sequence

MLQAILEFAPETLYNELLTKVFRKSLFRMSSHHCANFVVQALASHAKSQDHMDLIWEELG
TKFRDLFEMGKSGVVVSVLAATQRLHSHEHECCQAIAAAVCTGDEFPKCIVPRILFLENF
FSLRDKSNWSWPHGTKIHVVGSLILQSIFRLPSELIQVYVTSITSLEEHHVLEASKDPSG
SRVIESFLNSNISGKQKRKLVAKLRGHFGELSVHPFGSFTVEKCFTASNLNLRETIVSEM
LPLQPELSKSKQGPYLLRKLDIDGFARQPDQWKSRQASQQSALKEFYATFGPKETKSFEK
ESFLADTVSKSKPGKLKDIRKEIETTLASAKTSNTPFLAHQVSKKVKRSKDEKKRHRKDG
ESESKRKKIKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400023641
Transcript Infomation

pacid=37463805 locus=PGSC0003DMG400009149 ID=PGSC0003DMT400023641.v4.03 annot-version=v4.03
Sequence

ATGTTGCAGGCTATCCTGGAATTTGCTCCTGAAACATTGTACAATGAGTTGTTAACGAAA
GTTTTCAGGAAGTCATTGTTTCGAATGTCATCTCATCACTGTGCAAACTTCGTCGTGCAG
GCTTTAGCATCTCATGCCAAAAGTCAGGATCATATGGACTTGATCTGGGAGGAGCTTGGG
ACAAAGTTTCGCGATCTTTTTGAAATGGGAAAGTCTGGAGTTGTTGTTTCTGTCCTTGCT
GCAACTCAAAGACTCCACAGCCATGAACATGAGTGTTGTCAGGCCATTGCTGCTGCTGTA
TGCACAGGGGATGAGTTTCCCAAGTGTATTGTCCCCCGAATATTATTTCTTGAAAATTTC
TTTAGCTTAAGAGACAAATCGAACTGGAGTTGGCCACATGGAACAAAGATTCATGTAGTT
GGATCTTTGATTCTGCAGTCGATATTTAGACTTCCCAGTGAACTAATACAGGTGTATGTT
ACTAGTATCACGTCTTTAGAAGAACATCATGTTCTTGAGGCATCGAAAGATCCTAGTGGT
TCACGGGTCATTGAATCTTTTCTAAACTCGAATATATCGGGAAAGCAAAAGAGGAAGTTA
GTTGCCAAGCTTCGGGGACATTTTGGTGAACTCTCAGTGCATCCATTTGGTTCATTTACT
GTTGAAAAGTGCTTCACTGCTAGTAACTTGAATCTGAGAGAGACAATAGTATCGGAAATG
TTACCTCTCCAACCAGAGCTATCCAAGTCTAAGCAGGGACCTTACCTACTGAGGAAACTC
GATATTGATGGATTTGCAAGGCAACCCGACCAGTGGAAGTCGAGACAAGCTTCACAACAA
TCTGCTCTGAAAGAATTTTATGCTACATTTGGACCAAAGGAAACCAAATCATTTGAAAAG
GAGAGCTTTCTTGCTGATACTGTTTCCAAATCAAAGCCAGGAAAGTTAAAAGACATTAGG
AAAGAAATTGAGACAACTTTGGCTTCTGCCAAAACTTCAAATACCCCCTTCTTGGCTCAT
CAGGTTTCAAAAAAAGTGAAAAGGTCTAAAGACGAGAAGAAAAGGCATAGGAAAGATGGC
GAGTCAGAATCTAAAAGAAAGAAGATCAAAGTTTAA