Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023617
CDS Infomation

pacid=37460812 polypeptide=PGSC0003DMP400016101 locus=PGSC0003DMG400009144 ID=PGSC0003DMT400023617.v4.03 annot-version=v4.03
Sequence

ATGGGTTCAGAAAGTCATCAACAATCTGAAAACAATGAACACGAACATTCCAGACCTTTG
TATCTACAAAAATTTCGCCTATACGAAACTACCTCGAACTTCTATATGGTTGGAAGAGAT
AAAACTAGAACTTATTGGAAAGTTTTGAAGATAGATAGATTAGAGCCTACAGAGCTAATT
ATGTATGAAGATTCTGCCACATATTCAGAGATTGAATGTATTGATCTACTTAAAAGAATA
CACGAAGGGAACAAGTCAACTGGAGGGCTTAAATTCGTCTCAACTTGTTATGGAATTGTT
GGTTTTGTAAAGTTTCTGGGACCTTATCACATGCTTGTTATTACGAAAAGAAGGAAGATT
GGAGTAATATGTGGTCATGCGGTTTATGCCATTACAAAGAGCGAGATGTTCCCAATTCCC
AATTCTACTGTGCTATCCAAAATGCCTTATTCTAAGAATGAGAACAGATACAAGAAGCTC
CTGCACACAGTGGATCTCACAAGAGACTTCTTTTTCAGCTACTCCTATCATATTATGATT
AGCCTTCAAAAGAATTTGAGTAATTGTCAGTCTGGACTCACGCTTTACGACACAATGTTT
GTATGGAATGAGTTTTTAACCCGAGGAATTCGCCATCAGCTCAAAAATACTCTTTGGACT
GTCGCTTTAGTATATGGATTCTTTAAACAGGTTACACTTCCTCTTTCTGGTAGGGACTTC
ATATTGACCCTAATTGCTAGACGATCTCGTCATTATGCTGGTACCAGATATTTGAAAAGA
GGTGTAAATGAGAAGGGTCGCGTAGCAAATGATGTCGAAACAGAACAAATTGTGCTTGAA
GATGTGCCTGCTGGGTGCCCGCTACAAATAAGTGCTGTTGTGCAGAATCGGGGTTCAATA
CCTCTTTTTTGGTCTCAAGAGACTTCACGTTTGAATATTAAGCCTGACATCATACTCTCT
AGGAAGGACTTGAATTTTGAAGCCACCAAACGTCACTTTGAGAATCTTGTGAAGAGATAT
GGAAATCCAATTATAATATTGAATTTGATTAAGACTCGTGAGAAGCGGCCAAGAGAAACA
ATTCTTCGTGCAGCATTTGCTAATGCTATTGAGTTTATAAATAAAGATCTTTCTGTGGAA
AACCACTTGAGATTTCTTCACTGGGACCTAAATAAACACTCAAGAAGCAAAGCTACAAAT
GTCCTGACACTCCTGGGCAAGGTGGCTGCTAATGCATTGGAGTTAACAGGCTTCCTTCAC
TGTCAACTTATTCCTGCCTCCAAGACTGGGAAATTGCTAAAATTCTCGCCCATTGACAAT
ACTGAAGATCAAGCTGGACAAGACTCCTGTGAAGTGAGAGCTGAACCGAATTCCCCTAGT
GGAGATTACCATGTCAACCTTTCAACACAACAGAGAGGGGTGTTACGAACTAATTGCATA
GACTGTTTGGATCGCACAAATGTTGCACAATATGCCTATGGGCTGGTTGCCCTGGGCCAT
CAGCTTCATGCCTTGGGCTTTATAGATGTGGAGAGTATTGATTTAGATTCCCCGTTAGCA
GATAATCTAATGAAACTCTATGAAGAAATGGGCGACATACTTGCATTACAATATGGAGGG
TCTGCTGCACATAACAAGATATTTTCAGAGAGACGAGGCCAATGGAAAGCAGCAACTCAG
TCTCAAGAGCTTTTTAGAACGCTTCAGCGCTATTACAGTAATGCCTACATGGATGCTGAG
AAACAAGATGCCATTAATGTGTTTTTGGGACATTTCCGGCCTCAAGAAGGTAAGCCAGCT
CTCTGGGAATTGGATTCAGACCAGCACTATAGTGTTGGGGGGCATGCATCAAGTTTAGCC
ATGGAGAGTTCTAGGTCATTTATTAAAAGGTCGCTGTCAGAAGGAAACTTGATCTGCGGA
AGCAGCTCTCCTGTCAAAGAAACTGACACAGAGCAGACCGATGACTCTGACCAACCTTTG
CCTGAGAGTGCAAAAGGTGGTAGTAAGGGTCTTTCCGAGTCCACCCCAGAAATATCTACT
TGTGAAACTGATATGTCGTTTGCCAGGTACACACCCTCAATGTCTGGTAGACAGCTTTTC
CTAGATATGCAATTAGAGCAGCGTCTCGGGAGTGGAAGTGTTAGATTGCGTGATCGTGTT
GATTCAATTGATTTTTCAAATTTCCTAGATGTTGAGTGGCTCTCTTCGTCCGGAAATTCA
TGTGAAGAAGAAGCATTCGAGAGATCTGCAATCATAGGTTCACCATGTTGTGTCCTCTCA
TCTGACTGTGTAACAGTTGAATCTAAAGCTGAAACAAGCTCTTCAGTATTTGAGTCTTCA
ATCTTGAAGCGTCAGGAGCAGACTAGTAGAGAGCTCAATTTTGATGCCAAAGGAAGTAGT
AAACATATTGCTGAATTTTCTGAGAAGTTTGTGCATTGGGTTAACAACGGAGATATGCTT
TTCCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016101
PEP Infomation

pacid=37460812 transcript=PGSC0003DMT400023617 locus=PGSC0003DMG400009144 ID=PGSC0003DMT400023617.v4.03 annot-version=v4.03
Sequence

MGSESHQQSENNEHEHSRPLYLQKFRLYETTSNFYMVGRDKTRTYWKVLKIDRLEPTELI
MYEDSATYSEIECIDLLKRIHEGNKSTGGLKFVSTCYGIVGFVKFLGPYHMLVITKRRKI
GVICGHAVYAITKSEMFPIPNSTVLSKMPYSKNENRYKKLLHTVDLTRDFFFSYSYHIMI
SLQKNLSNCQSGLTLYDTMFVWNEFLTRGIRHQLKNTLWTVALVYGFFKQVTLPLSGRDF
ILTLIARRSRHYAGTRYLKRGVNEKGRVANDVETEQIVLEDVPAGCPLQISAVVQNRGSI
PLFWSQETSRLNIKPDIILSRKDLNFEATKRHFENLVKRYGNPIIILNLIKTREKRPRET
ILRAAFANAIEFINKDLSVENHLRFLHWDLNKHSRSKATNVLTLLGKVAANALELTGFLH
CQLIPASKTGKLLKFSPIDNTEDQAGQDSCEVRAEPNSPSGDYHVNLSTQQRGVLRTNCI
DCLDRTNVAQYAYGLVALGHQLHALGFIDVESIDLDSPLADNLMKLYEEMGDILALQYGG
SAAHNKIFSERRGQWKAATQSQELFRTLQRYYSNAYMDAEKQDAINVFLGHFRPQEGKPA
LWELDSDQHYSVGGHASSLAMESSRSFIKRSLSEGNLICGSSSPVKETDTEQTDDSDQPL
PESAKGGSKGLSESTPEISTCETDMSFARYTPSMSGRQLFLDMQLEQRLGSGSVRLRDRV
DSIDFSNFLDVEWLSSSGNSCEEEAFERSAIIGSPCCVLSSDCVTVESKAETSSSVFESS
ILKRQEQTSRELNFDAKGSSKHIAEFSEKFVHWVNNGDMLFP*

Transcript Sequence

Transcript ID

PGSC0003DMT400023617
Transcript Infomation

pacid=37460812 locus=PGSC0003DMG400009144 ID=PGSC0003DMT400023617.v4.03 annot-version=v4.03
Sequence

ATGGGTTCAGAAAGTCATCAACAATCTGAAAACAATGAACACGAACATTCCAGACCTTTG
TATCTACAAAAATTTCGCCTATACGAAACTACCTCGAACTTCTATATGGTTGGAAGAGAT
AAAACTAGAACTTATTGGAAAGTTTTGAAGATAGATAGATTAGAGCCTACAGAGCTAATT
ATGTATGAAGATTCTGCCACATATTCAGAGATTGAATGTATTGATCTACTTAAAAGAATA
CACGAAGGGAACAAGTCAACTGGAGGGCTTAAATTCGTCTCAACTTGTTATGGAATTGTT
GGTTTTGTAAAGTTTCTGGGACCTTATCACATGCTTGTTATTACGAAAAGAAGGAAGATT
GGAGTAATATGTGGTCATGCGGTTTATGCCATTACAAAGAGCGAGATGTTCCCAATTCCC
AATTCTACTGTGCTATCCAAAATGCCTTATTCTAAGAATGAGAACAGATACAAGAAGCTC
CTGCACACAGTGGATCTCACAAGAGACTTCTTTTTCAGCTACTCCTATCATATTATGATT
AGCCTTCAAAAGAATTTGAGTAATTGTCAGTCTGGACTCACGCTTTACGACACAATGTTT
GTATGGAATGAGTTTTTAACCCGAGGAATTCGCCATCAGCTCAAAAATACTCTTTGGACT
GTCGCTTTAGTATATGGATTCTTTAAACAGGTTACACTTCCTCTTTCTGGTAGGGACTTC
ATATTGACCCTAATTGCTAGACGATCTCGTCATTATGCTGGTACCAGATATTTGAAAAGA
GGTGTAAATGAGAAGGGTCGCGTAGCAAATGATGTCGAAACAGAACAAATTGTGCTTGAA
GATGTGCCTGCTGGGTGCCCGCTACAAATAAGTGCTGTTGTGCAGAATCGGGGTTCAATA
CCTCTTTTTTGGTCTCAAGAGACTTCACGTTTGAATATTAAGCCTGACATCATACTCTCT
AGGAAGGACTTGAATTTTGAAGCCACCAAACGTCACTTTGAGAATCTTGTGAAGAGATAT
GGAAATCCAATTATAATATTGAATTTGATTAAGACTCGTGAGAAGCGGCCAAGAGAAACA
ATTCTTCGTGCAGCATTTGCTAATGCTATTGAGTTTATAAATAAAGATCTTTCTGTGGAA
AACCACTTGAGATTTCTTCACTGGGACCTAAATAAACACTCAAGAAGCAAAGCTACAAAT
GTCCTGACACTCCTGGGCAAGGTGGCTGCTAATGCATTGGAGTTAACAGGCTTCCTTCAC
TGTCAACTTATTCCTGCCTCCAAGACTGGGAAATTGCTAAAATTCTCGCCCATTGACAAT
ACTGAAGATCAAGCTGGACAAGACTCCTGTGAAGTGAGAGCTGAACCGAATTCCCCTAGT
GGAGATTACCATGTCAACCTTTCAACACAACAGAGAGGGGTGTTACGAACTAATTGCATA
GACTGTTTGGATCGCACAAATGTTGCACAATATGCCTATGGGCTGGTTGCCCTGGGCCAT
CAGCTTCATGCCTTGGGCTTTATAGATGTGGAGAGTATTGATTTAGATTCCCCGTTAGCA
GATAATCTAATGAAACTCTATGAAGAAATGGGCGACATACTTGCATTACAATATGGAGGG
TCTGCTGCACATAACAAGATATTTTCAGAGAGACGAGGCCAATGGAAAGCAGCAACTCAG
TCTCAAGAGCTTTTTAGAACGCTTCAGCGCTATTACAGTAATGCCTACATGGATGCTGAG
AAACAAGATGCCATTAATGTGTTTTTGGGACATTTCCGGCCTCAAGAAGGTAAGCCAGCT
CTCTGGGAATTGGATTCAGACCAGCACTATAGTGTTGGGGGGCATGCATCAAGTTTAGCC
ATGGAGAGTTCTAGGTCATTTATTAAAAGGTCGCTGTCAGAAGGAAACTTGATCTGCGGA
AGCAGCTCTCCTGTCAAAGAAACTGACACAGAGCAGACCGATGACTCTGACCAACCTTTG
CCTGAGAGTGCAAAAGGTGGTAGTAAGGGTCTTTCCGAGTCCACCCCAGAAATATCTACT
TGTGAAACTGATATGTCGTTTGCCAGGTACACACCCTCAATGTCTGGTAGACAGCTTTTC
CTAGATATGCAATTAGAGCAGCGTCTCGGGAGTGGAAGTGTTAGATTGCGTGATCGTGTT
GATTCAATTGATTTTTCAAATTTCCTAGATGTTGAGTGGCTCTCTTCGTCCGGAAATTCA
TGTGAAGAAGAAGCATTCGAGAGATCTGCAATCATAGGTTCACCATGTTGTGTCCTCTCA
TCTGACTGTGTAACAGTTGAATCTAAAGCTGAAACAAGCTCTTCAGTATTTGAGTCTTCA
ATCTTGAAGCGTCAGGAGCAGACTAGTAGAGAGCTCAATTTTGATGCCAAAGGAAGTAGT
AAACATATTGCTGAATTTTCTGAGAAGTTTGTGCATTGGGTTAACAACGGAGATATGCTT
TTCCCTTGA