Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023614
CDS Infomation

pacid=37462086 polypeptide=PGSC0003DMP400016098 locus=PGSC0003DMG400009142 ID=PGSC0003DMT400023614.v4.03 annot-version=v4.03
Sequence

ATGTGTGGTGGTTCTATAATCTCCGATTACATAGACCCTAATCGGACTTCTCGCCGGCTC
ACAGCCGAGTTGCTATGGGGTCGTTTCGATCTCAGTAAGAAGCAAAAAAATCCCAACAAC
TATCACTCTAAGCATTTGCGATCTGAAGTTGTTGATGACTTTGAGGCCGATTTTCAGGAC
TTCAAAGAGTTATCTGATGATGAGGATGTTGAAGTCGATGTCAAGCCATTTGCCTTCTCT
GCTTCCAAACAGTCTACTGGTTCCAAATCTTCGAAAACTGTTGATTCAGACAAGGATGCT
GCTGATAAATCTTCTAAGAGAAAGAGGAAGAATCAGTATAGGGGGATCAGACAGAGACCT
TGGGGCAAGTGGGCAGCTGAAATACGTGACCCAAGGAAAGGGGTTCGGGTCTGGCTGGGA
ACCTTCAATACTGCAGAAGAAGCTGCCAGAGCTTATGATATTGAGGCTAGGAAGATCAGA
GGCAAGAAAGCCAAGGTAAATTTTCCCGATGAAGCTCCAGCACCTGCATCAAGACACACT
GTTAAGGTGAATCCTCAGAAGGTCCTTCCTGAGGAGAGCCTGGATTCACTTCAATCCGAC
TCAGCAATCATGAACAGCGACCATTATGATTCTTTCGGATTTTTTGAAGAGAAACCCATG
ACAAAGCAGTATGGATATGAGAATGGGAGCAGTGCTTCTGCAGATACGGGATTTGGCTCA
TTCGTCCCTTCAGTTGGTGGTGATATCTACTTCAACTCTGATGTAGGAAGCAACTCTTTT
GAGTGCTCTGATTTTGGTTGGGGAGAGCCATGCTCCAGGACTCCGGAGATATCATCTGTT
CTGTCAGCTGCTGTTGATAGTAATGAAGCTCAATTTGTTGAAGATGCCAATCCCCAGAAA
AAGCTGAAATCATGCACCAACAATCCCGTAGCTGATGATGGAAACACCGTTAACATGCTA
TCTGAAGAGCTTCCTGCTTTTGCACCCCAGATGAATTTCTTTCATCTCCAATATATGGAG
GGAAATTGGGATGCATCAGTTGGTAACTTCCTCAACACAAGTGCAACTCAAAATGGTGAA
AATGCTATGGACCTGTGGTCCTTTGATGATGTTCCTTCTTTAATGGGAGGTATCTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016098
PEP Infomation

pacid=37462086 transcript=PGSC0003DMT400023614 locus=PGSC0003DMG400009142 ID=PGSC0003DMT400023614.v4.03 annot-version=v4.03
Sequence

MCGGSIISDYIDPNRTSRRLTAELLWGRFDLSKKQKNPNNYHSKHLRSEVVDDFEADFQD
FKELSDDEDVEVDVKPFAFSASKQSTGSKSSKTVDSDKDAADKSSKRKRKNQYRGIRQRP
WGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDIEARKIRGKKAKVNFPDEAPAPASRHT
VKVNPQKVLPEESLDSLQSDSAIMNSDHYDSFGFFEEKPMTKQYGYENGSSASADTGFGS
FVPSVGGDIYFNSDVGSNSFECSDFGWGEPCSRTPEISSVLSAAVDSNEAQFVEDANPQK
KLKSCTNNPVADDGNTVNMLSEELPAFAPQMNFFHLQYMEGNWDASVGNFLNTSATQNGE
NAMDLWSFDDVPSLMGGIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400023614
Transcript Infomation

pacid=37462086 locus=PGSC0003DMG400009142 ID=PGSC0003DMT400023614.v4.03 annot-version=v4.03
Sequence

ATGTGTGGTGGTTCTATAATCTCCGATTACATAGACCCTAATCGGACTTCTCGCCGGCTC
ACAGCCGAGTTGCTATGGGGTCGTTTCGATCTCAGTAAGAAGCAAAAAAATCCCAACAAC
TATCACTCTAAGCATTTGCGATCTGAAGTTGTTGATGACTTTGAGGCCGATTTTCAGGAC
TTCAAAGAGTTATCTGATGATGAGGATGTTGAAGTCGATGTCAAGCCATTTGCCTTCTCT
GCTTCCAAACAGTCTACTGGTTCCAAATCTTCGAAAACTGTTGATTCAGACAAGGATGCT
GCTGATAAATCTTCTAAGAGAAAGAGGAAGAATCAGTATAGGGGGATCAGACAGAGACCT
TGGGGCAAGTGGGCAGCTGAAATACGTGACCCAAGGAAAGGGGTTCGGGTCTGGCTGGGA
ACCTTCAATACTGCAGAAGAAGCTGCCAGAGCTTATGATATTGAGGCTAGGAAGATCAGA
GGCAAGAAAGCCAAGGTAAATTTTCCCGATGAAGCTCCAGCACCTGCATCAAGACACACT
GTTAAGGTGAATCCTCAGAAGGTCCTTCCTGAGGAGAGCCTGGATTCACTTCAATCCGAC
TCAGCAATCATGAACAGCGACCATTATGATTCTTTCGGATTTTTTGAAGAGAAACCCATG
ACAAAGCAGTATGGATATGAGAATGGGAGCAGTGCTTCTGCAGATACGGGATTTGGCTCA
TTCGTCCCTTCAGTTGGTGGTGATATCTACTTCAACTCTGATGTAGGAAGCAACTCTTTT
GAGTGCTCTGATTTTGGTTGGGGAGAGCCATGCTCCAGGACTCCGGAGATATCATCTGTT
CTGTCAGCTGCTGTTGATAGTAATGAAGCTCAATTTGTTGAAGATGCCAATCCCCAGAAA
AAGCTGAAATCATGCACCAACAATCCCGTAGCTGATGATGGAAACACCGTTAACATGCTA
TCTGAAGAGCTTCCTGCTTTTGCACCCCAGATGAATTTCTTTCATCTCCAATATATGGAG
GGAAATTGGGATGCATCAGTTGGTAACTTCCTCAACACAAGTGCAACTCAAAATGGTGAA
AATGCTATGGACCTGTGGTCCTTTGATGATGTTCCTTCTTTAATGGGAGGTATCTTTTAA