Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023577
CDS Infomation

pacid=37463577 polypeptide=PGSC0003DMP400016079 locus=PGSC0003DMG400009130 ID=PGSC0003DMT400023577.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTGTACTTAGATCGAAATCGTCGAGACATACGGCCTCTATGGCTATTGCCCAC
TTCAGATATTTTATCATCAATGATTTTCACGCGGGTCATTTACCCAATTTCCATTTGTGT
AATCGAACCAAATGGGATAATTTGGTCTCAAATTCTGGTCATAGTTCTTCTTTATTCAAG
TCTGTATCGTTTCGTAGTGAATTTGTTGACCGATGTTATGATAATTTGAAGAATTCACAG
AATTCAAGTAGGAAGAGTAAGGAGAAAATTAGTATGTCTAGTAACTATGGGGAACCTCCT
GAGATTTGGCAACCACCTGGTGAGGGGATTGTGGTTCGTCCTGGTGTGAAGTTTGTTCAG
GTGGGTGAAGGGGAAGGTCCTGGTTCGGGTTCTGGAGGTGGGTTTGGTTCTGGGTCAAAA
GATGGGTCTTGGGGTGGATCCAATTTGGGTACCCAATTTCCCACACCAAAGCAACTGTGT
AAAGGACTTGATAAGTTTGTAATTGGACAGGAGAGAGCTAAAAAGGTTCTGTCTGTCGCC
GTATATAATCATTACAAGAGAATATATAATGACTCTTCACATAAGTGGCCTGCAGGAAAT
GACAGTAGTGAAAAAACAGATGGAATAGAAAATGAGTCTGTGGAGCTTGAGAAGAGTAAC
ATCCTTTTAATGGGGCCAACAGGTTCAGGGAAAACTTTACTTGCCAAGACCTTAGCTCGA
TTGGTGAATGTTCCCTTTGTTATAGCAGATGCTACGACACTAACTCAGGCAGGATATGTT
GGGGAAGATGTGGAATCTATTCTATATAAGCTCCTCACTGTTGCTGACTACAATGTAGCA
GCTGCTCAGCAAGGCATAGTGTATATTGATGAAGTTGACAAGATCACGAAAAAGGCTGAA
AGCCTCAACATTAGTAGAGATGTTTCAGGAGAGGGCGTCCAGCAGGCATTGTTGAAGATG
CTTGAAGGAACAATTGTCAATGTGCCGGAGAAGGGAGCTCGGAAGCACCCTAGAGGGGAT
AATATTCAGATTGATACCAAAGACATTCTCTTTATATGTGGTGGAGCCTTCATTGACTTG
GAGAAAACAATCTCTGAAAGGCGCCAAGATTCTTCTATAGGATTTGGTGCACCAGTTCGC
ACAAACATGAGGACTGGTGGTGTTACAAGTGCTGCTGTGACGTCATCTTTATTGGAGACA
GTTGAAAGTAGTGATCTAATATCATATGGTCTGATACCTGAGTTTGTCGGTCGATTTCCC
ATCCTTGTTAGTCTGTCAGCTTTAACTGAGGATCAACTTGTGCAGGTTCTAACTGAGCCA
AAAAATGCGCTAGGGAAGCAGTACAAAAAGATGTTCCAAATGAACGGGGTAAAGTTGCAT
TTCGTTGAAGATGCACTAAGATTGATAGCTAGGAAAGCATTATCTAAAAATACTGGTGCT
CGTGGATTGCGATCCATATTGGAGAACATTTTGATGGATGCTATGTATGAGATTCCTGAT
GTCAGAACAGGCGATGATGTAATAGATGCCGTTGTAGTTGATGAGGAGTCTGTAGGAACT
GAGGGACGAGGATGTGGGGGTAAAATCCTTTATGGCAAAGGTGCATTTGACCAACACTTT
CCACAGAATAGATCAAAGGATTCTGAGTCAAACATGGAGGGGTCTGATGGAGACCATGAG
GCGGAACAGGAGCTTCCTTCCATTGTTGCTTTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016079
PEP Infomation

pacid=37463577 transcript=PGSC0003DMT400023577 locus=PGSC0003DMG400009130 ID=PGSC0003DMT400023577.v4.03 annot-version=v4.03
Sequence

MAAVLRSKSSRHTASMAIAHFRYFIINDFHAGHLPNFHLCNRTKWDNLVSNSGHSSSLFK
SVSFRSEFVDRCYDNLKNSQNSSRKSKEKISMSSNYGEPPEIWQPPGEGIVVRPGVKFVQ
VGEGEGPGSGSGGGFGSGSKDGSWGGSNLGTQFPTPKQLCKGLDKFVIGQERAKKVLSVA
VYNHYKRIYNDSSHKWPAGNDSSEKTDGIENESVELEKSNILLMGPTGSGKTLLAKTLAR
LVNVPFVIADATTLTQAGYVGEDVESILYKLLTVADYNVAAAQQGIVYIDEVDKITKKAE
SLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDL
EKTISERRQDSSIGFGAPVRTNMRTGGVTSAAVTSSLLETVESSDLISYGLIPEFVGRFP
ILVSLSALTEDQLVQVLTEPKNALGKQYKKMFQMNGVKLHFVEDALRLIARKALSKNTGA
RGLRSILENILMDAMYEIPDVRTGDDVIDAVVVDEESVGTEGRGCGGKILYGKGAFDQHF
PQNRSKDSESNMEGSDGDHEAEQELPSIVAL*

Transcript Sequence

Transcript ID

PGSC0003DMT400023577
Transcript Infomation

pacid=37463577 locus=PGSC0003DMG400009130 ID=PGSC0003DMT400023577.v4.03 annot-version=v4.03
Sequence

ATGGCAGCTGTACTTAGATCGAAATCGTCGAGACATACGGCCTCTATGGCTATTGCCCAC
TTCAGATATTTTATCATCAATGATTTTCACGCGGGTCATTTACCCAATTTCCATTTGTGT
AATCGAACCAAATGGGATAATTTGGTCTCAAATTCTGGTCATAGTTCTTCTTTATTCAAG
TCTGTATCGTTTCGTAGTGAATTTGTTGACCGATGTTATGATAATTTGAAGAATTCACAG
AATTCAAGTAGGAAGAGTAAGGAGAAAATTAGTATGTCTAGTAACTATGGGGAACCTCCT
GAGATTTGGCAACCACCTGGTGAGGGGATTGTGGTTCGTCCTGGTGTGAAGTTTGTTCAG
GTGGGTGAAGGGGAAGGTCCTGGTTCGGGTTCTGGAGGTGGGTTTGGTTCTGGGTCAAAA
GATGGGTCTTGGGGTGGATCCAATTTGGGTACCCAATTTCCCACACCAAAGCAACTGTGT
AAAGGACTTGATAAGTTTGTAATTGGACAGGAGAGAGCTAAAAAGGTTCTGTCTGTCGCC
GTATATAATCATTACAAGAGAATATATAATGACTCTTCACATAAGTGGCCTGCAGGAAAT
GACAGTAGTGAAAAAACAGATGGAATAGAAAATGAGTCTGTGGAGCTTGAGAAGAGTAAC
ATCCTTTTAATGGGGCCAACAGGTTCAGGGAAAACTTTACTTGCCAAGACCTTAGCTCGA
TTGGTGAATGTTCCCTTTGTTATAGCAGATGCTACGACACTAACTCAGGCAGGATATGTT
GGGGAAGATGTGGAATCTATTCTATATAAGCTCCTCACTGTTGCTGACTACAATGTAGCA
GCTGCTCAGCAAGGCATAGTGTATATTGATGAAGTTGACAAGATCACGAAAAAGGCTGAA
AGCCTCAACATTAGTAGAGATGTTTCAGGAGAGGGCGTCCAGCAGGCATTGTTGAAGATG
CTTGAAGGAACAATTGTCAATGTGCCGGAGAAGGGAGCTCGGAAGCACCCTAGAGGGGAT
AATATTCAGATTGATACCAAAGACATTCTCTTTATATGTGGTGGAGCCTTCATTGACTTG
GAGAAAACAATCTCTGAAAGGCGCCAAGATTCTTCTATAGGATTTGGTGCACCAGTTCGC
ACAAACATGAGGACTGGTGGTGTTACAAGTGCTGCTGTGACGTCATCTTTATTGGAGACA
GTTGAAAGTAGTGATCTAATATCATATGGTCTGATACCTGAGTTTGTCGGTCGATTTCCC
ATCCTTGTTAGTCTGTCAGCTTTAACTGAGGATCAACTTGTGCAGGTTCTAACTGAGCCA
AAAAATGCGCTAGGGAAGCAGTACAAAAAGATGTTCCAAATGAACGGGGTAAAGTTGCAT
TTCGTTGAAGATGCACTAAGATTGATAGCTAGGAAAGCATTATCTAAAAATACTGGTGCT
CGTGGATTGCGATCCATATTGGAGAACATTTTGATGGATGCTATGTATGAGATTCCTGAT
GTCAGAACAGGCGATGATGTAATAGATGCCGTTGTAGTTGATGAGGAGTCTGTAGGAACT
GAGGGACGAGGATGTGGGGGTAAAATCCTTTATGGCAAAGGTGCATTTGACCAACACTTT
CCACAGAATAGATCAAAGGATTCTGAGTCAAACATGGAGGGGTCTGATGGAGACCATGAG
GCGGAACAGGAGCTTCCTTCCATTGTTGCTTTGTAA