Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023575
CDS Infomation

pacid=37461697 polypeptide=PGSC0003DMP400016077 locus=PGSC0003DMG400009129 ID=PGSC0003DMT400023575.v4.03 annot-version=v4.03
Sequence

ATGGAAATGGAGAACATTGAGTGTGTTTCGTCAACTGATGGTATTGAAGATGAAGAGATC
CAGTTATCTCATAATCATCAATTTTCTTCTGCAAAACCTCATAATATTCTTCTTCCCGGA
CTTGCCCCTACTAGTGTACATGAATTGCTTGAATGCCCCGTTTGCACCAATTCTATGTAT
CCACCAATTCATCAGTGTCACAATGGGCACACACTTTGTTCTACCTGCAAAACAAGGGTG
CACAATCGATGTCCTACATGTAGACAAGAGCTTGGTGATATAAGGTGCTTAGCACTGGAG
AAGGTTGCAGAGTCACTTGAACTGCCTTGCAAATATTTTTCTTTGGGATGCCCAGAAATA
TTCCCATATTACAGTAAGCTCAAGCATGAGGCACTGTGCAATTTTAGACCATACAATTGC
CCATATGCTGGATCAGAATGTTCAGTGACTGGCGACATCCCTTATTTGGTTTCACATTTA
AGAGATGATCACAAAGTGGATATGCACACGGGATGCACATTCAACCATCGCTACGTGAAA
TCAAATCCTCGAGAAGTAGAAAATGCCACATGGATGCTGACGGTCTTCCATTGTTTTGGA
CAGTATTTCTGTCTCCACTTTGAGGCCTTCCAGCTTGGTATGGCCCCTGTTTATATGGCC
TTTCTACGATTTATGGGTGATGAATCTGAGGCACGCAATTACAGTTATAGTCTCGAAGTA
GGAGGAAATGGTAGAAAGCTCATATGGGAGGGAACACCAAGAAGTGTTCGAGATAGCCAC
CGCAAGGTCAGGGACAGTCATGATGGTCTAATAATCCAACGTAACATGGCACTTTTCTTT
TCTGGAGGGGATCGAAAGGAGCTAAAACTTCGAGTTACTGGAAGGATATGGAAAGAACAG
CAAAATCCAGAAGGTGGAGTGTGCATACCAAATCTGTGTAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016077
PEP Infomation

pacid=37461697 transcript=PGSC0003DMT400023575 locus=PGSC0003DMG400009129 ID=PGSC0003DMT400023575.v4.03 annot-version=v4.03
Sequence

MEMENIECVSSTDGIEDEEIQLSHNHQFSSAKPHNILLPGLAPTSVHELLECPVCTNSMY
PPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYFSLGCPEI
FPYYSKLKHEALCNFRPYNCPYAGSECSVTGDIPYLVSHLRDDHKVDMHTGCTFNHRYVK
SNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDESEARNYSYSLEV
GGNGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQ
QNPEGGVCIPNLCS*

Transcript Sequence

Transcript ID

PGSC0003DMT400023575
Transcript Infomation

pacid=37461697 locus=PGSC0003DMG400009129 ID=PGSC0003DMT400023575.v4.03 annot-version=v4.03
Sequence

ATGGAAATGGAGAACATTGAGTGTGTTTCGTCAACTGATGGTATTGAAGATGAAGAGATC
CAGTTATCTCATAATCATCAATTTTCTTCTGCAAAACCTCATAATATTCTTCTTCCCGGA
CTTGCCCCTACTAGTGTACATGAATTGCTTGAATGCCCCGTTTGCACCAATTCTATGTAT
CCACCAATTCATCAGTGTCACAATGGGCACACACTTTGTTCTACCTGCAAAACAAGGGTG
CACAATCGATGTCCTACATGTAGACAAGAGCTTGGTGATATAAGGTGCTTAGCACTGGAG
AAGGTTGCAGAGTCACTTGAACTGCCTTGCAAATATTTTTCTTTGGGATGCCCAGAAATA
TTCCCATATTACAGTAAGCTCAAGCATGAGGCACTGTGCAATTTTAGACCATACAATTGC
CCATATGCTGGATCAGAATGTTCAGTGACTGGCGACATCCCTTATTTGGTTTCACATTTA
AGAGATGATCACAAAGTGGATATGCACACGGGATGCACATTCAACCATCGCTACGTGAAA
TCAAATCCTCGAGAAGTAGAAAATGCCACATGGATGCTGACGGTCTTCCATTGTTTTGGA
CAGTATTTCTGTCTCCACTTTGAGGCCTTCCAGCTTGGTATGGCCCCTGTTTATATGGCC
TTTCTACGATTTATGGGTGATGAATCTGAGGCACGCAATTACAGTTATAGTCTCGAAGTA
GGAGGAAATGGTAGAAAGCTCATATGGGAGGGAACACCAAGAAGTGTTCGAGATAGCCAC
CGCAAGGTCAGGGACAGTCATGATGGTCTAATAATCCAACGTAACATGGCACTTTTCTTT
TCTGGAGGGGATCGAAAGGAGCTAAAACTTCGAGTTACTGGAAGGATATGGAAAGAACAG
CAAAATCCAGAAGGTGGAGTGTGCATACCAAATCTGTGTAGCTAA