Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023553
CDS Infomation

pacid=37460235 polypeptide=PGSC0003DMP400016065 locus=PGSC0003DMG400009123 ID=PGSC0003DMT400023553.v4.03 annot-version=v4.03
Sequence

ATGGCGATTATTTCTGATTTCGAGGAGCAAGATAGCAAACCAACATCATCATCGGCGGCG
GCGGTGTCAAAGCCCTTTAAGGCGGTGCTTGATCCTGCTAATCCTCTAGGGTTTCTTCAA
GCCGTGTTCGAGTTCGTCGGACGGGAATCTGATCTCTTCAAGAGTGATTCATTGATTAAT
GATGTCAATGCTGTTGTTCGTATGGTGAAAGACAAGCTGGTGACCGAGGAGCGCAAGAGG
AAAGTGGAAGCAGAAGCATCAAACTCAAAGGCGGCGGGAAAGAAGGTCAAGGAGGATGTT
CCAGTTGTTGCTGCAACTGCTGCTGCAAAGAAGGAAGAGGTTAAAGAGGCAAAAGGGAAA
GAAGTTATGAAGGAGGCTAAGGAGGAGGACAAGAATGGTTCTCAAGGTCCTGCAGCTCCT
AACAACAACAATGGCCTTGACCTTGAGAACTACTCATGGGGTCAATCACTACAGGAAGTA
AATGTTAATATTCCCGTACCTGCTGGAACAAAATCAAGGTTCATTGTTTGTGATATATCA
AGGAACCGTCTTAAAGTTGGACTAAAGGGCCAGCCTCCCATAATTGATGGAGAGCTATAT
CGACCTGTGAAAGTTGATGATTGCTTCTGGAGTTTAGAGGACCAAAAATCCATCTCTGTT
CTCCTAACCAAGAAGGACCAAATGGAATGGTGGAAATGCTGTGTGAAAGGTGAACCTGAA
ATTGATACGCAGAAAGCAGAACCTGAAAGCAGCAAGCTGTCAGATTTGGACCCCGAGACG
CGATCAACTGTGGAGAAGATGATGTTTGATCAGCGACAGAAATCCATGGGTCTTCCAACA
AGTGATGAGTCGCAGAAACAAGAAATTCTCAAGAAATTTATGGCAGAGCATCCTGAAATG
GACTTCTCAAAGGCGAAGATATCCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016065
PEP Infomation

pacid=37460235 transcript=PGSC0003DMT400023553 locus=PGSC0003DMG400009123 ID=PGSC0003DMT400023553.v4.03 annot-version=v4.03
Sequence

MAIISDFEEQDSKPTSSSAAAVSKPFKAVLDPANPLGFLQAVFEFVGRESDLFKSDSLIN
DVNAVVRMVKDKLVTEERKRKVEAEASNSKAAGKKVKEDVPVVAATAAAKKEEVKEAKGK
EVMKEAKEEDKNGSQGPAAPNNNNGLDLENYSWGQSLQEVNVNIPVPAGTKSRFIVCDIS
RNRLKVGLKGQPPIIDGELYRPVKVDDCFWSLEDQKSISVLLTKKDQMEWWKCCVKGEPE
IDTQKAEPESSKLSDLDPETRSTVEKMMFDQRQKSMGLPTSDESQKQEILKKFMAEHPEM
DFSKAKIS*

Transcript Sequence

Transcript ID

PGSC0003DMT400023553
Transcript Infomation

pacid=37460235 locus=PGSC0003DMG400009123 ID=PGSC0003DMT400023553.v4.03 annot-version=v4.03
Sequence

ATGGCGATTATTTCTGATTTCGAGGAGCAAGATAGCAAACCAACATCATCATCGGCGGCG
GCGGTGTCAAAGCCCTTTAAGGCGGTGCTTGATCCTGCTAATCCTCTAGGGTTTCTTCAA
GCCGTGTTCGAGTTCGTCGGACGGGAATCTGATCTCTTCAAGAGTGATTCATTGATTAAT
GATGTCAATGCTGTTGTTCGTATGGTGAAAGACAAGCTGGTGACCGAGGAGCGCAAGAGG
AAAGTGGAAGCAGAAGCATCAAACTCAAAGGCGGCGGGAAAGAAGGTCAAGGAGGATGTT
CCAGTTGTTGCTGCAACTGCTGCTGCAAAGAAGGAAGAGGTTAAAGAGGCAAAAGGGAAA
GAAGTTATGAAGGAGGCTAAGGAGGAGGACAAGAATGGTTCTCAAGGTCCTGCAGCTCCT
AACAACAACAATGGCCTTGACCTTGAGAACTACTCATGGGGTCAATCACTACAGGAAGTA
AATGTTAATATTCCCGTACCTGCTGGAACAAAATCAAGGTTCATTGTTTGTGATATATCA
AGGAACCGTCTTAAAGTTGGACTAAAGGGCCAGCCTCCCATAATTGATGGAGAGCTATAT
CGACCTGTGAAAGTTGATGATTGCTTCTGGAGTTTAGAGGACCAAAAATCCATCTCTGTT
CTCCTAACCAAGAAGGACCAAATGGAATGGTGGAAATGCTGTGTGAAAGGTGAACCTGAA
ATTGATACGCAGAAAGCAGAACCTGAAAGCAGCAAGCTGTCAGATTTGGACCCCGAGACG
CGATCAACTGTGGAGAAGATGATGTTTGATCAGCGACAGAAATCCATGGGTCTTCCAACA
AGTGATGAGTCGCAGAAACAAGAAATTCTCAAGAAATTTATGGCAGAGCATCCTGAAATG
GACTTCTCAAAGGCGAAGATATCCTGA