Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023542
CDS Infomation

pacid=37459438 polypeptide=PGSC0003DMP400016057 locus=PGSC0003DMG400009120 ID=PGSC0003DMT400023542.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTATCGGAGTATATTCAACTCCAAAAATGGAATATGTTGAAGGACGTTGCGTC
AGCTTTATTAATTCGTCGACTAGTCTTAAACTATGGCCTATGATTGGGAGAACGGACTTT
CCGATTCAGAGGAAAAGGTTGGAAGTGAATTGTTCATTGCCTAATACTATCTCTCCGTTA
GAATCGGAGGAGAATGCAGCAACCTTAAGTAGCAGTGATTCCCTAGAGGATGAGTTCAGT
CATGTAACGAAGTTCGAAATGTCAGATTTTAAGATACGGAATCGTGTCAGCATTGGCCTT
GGTGGCAGGGGAGATGAAATGGTGTTTGAAGCAATGGTGAATGATCCTCATAGTCCATTG
TATAAGACCAGAGTTGTACTTAGACAACTTATAAGTCCTCGAGCCAAGCGGAGAGGACAT
CGTGCAATAGAGGTGTTGAAGAGACTGGCACGTCGTAAGCTCATGTATCATTCGTACTCT
ATGCAAGTTCATGGGTATATCTGCTCATCCATGATAGAGGAGAAGAGTTCATTCACCCTA
GTCCATGGGCATCATGGAAGTGCTTCATTGAGACACTGGCTTCAACGATCTGACTGGCTT
CCAACTCTAGAAGCTACTCTTTCCCTAGATCAGGAGTCTGTTAGAAGGGTGGGGGATGAT
ACTATAGGAGGGCCAGCTATTTCTCGGCAACTGCGGCTAATCCGAATTTTAATGAGGGAT
CTCTTGATTGGAGTGAACTATGTGCACAGCCATGGCCTTGCGCATACAGAGTTGAGGCTT
GAAAATTTGCACATTAGCGCGGTGGATAAACATATTAAGGTAGGTATATTGGGAAATGCT
TCTGACTTTAATGAGGCTGATCCTGCGGATAACACATCATATGACAATATGGATAGGAGG
AGAATGATGATTGCATTTGACATGAGATGTGTTGGATTCATCATGGCAAAAATGGTTTTG
AGGGAACTCATGGACCCAACGATCTTTGCTAAGTTCAAAGCATTCCTCACCAAGGGAAAT
GATCTCTCCTGTTTGCGGGAGTTTCTTCTGCATGCTGTAAAAAGAAATTCTTTGGCCGGA
AACTTTGGTATACAAATACTCGATAGGAACTGGGGTGCAGGTTGGCATTTGCTTTCAGTA
CTCCTTGCACCTAAACCTTTGGACAGGATAAGTTGCTTAAATGCTCTGAGGCATCCCTTC
TTGTGTGGACCAAAATGGCGTGTGAACCCTTCTATTGATCTAATCAGATGGAGTCTTGGC
TCAACCACTGTTCGAATTGCAGAGGAATATATTTATGGGCAACAGCAGCGAAGTAGGCTT
GCTCATTTTGTCGAATTAATGGAGATGCTAAATCCTTATCCGAAGCCAAAGCATTGGCTG
GGATTGCTTCCTGGAAAGTGGCGCCTGTTATATTGTACCGGAAGACATATAGGGTTGACC
CTTCGACAGCCTTCTGTTAGAGTACTCATTCGGGAAGCATACCTAACGATATCTAAAGTG
TCAAAACCTAACACAACATTTTCAGTTGCCTCACACATTAGCTTCACTGTTATGGCTGGC
CGCGACTGGGCTCATGATAAGTCTGGTGTAGGGGGGAAATTGCAAGTTGATTCCTTTTTC
AGATTGAGAGCTGGGAGACGGTTATATCTTAAGGAGGAAACTATCAGCTCGAAGTTTCCG
TCAGCTACACCGGATGCTCAAGCTTCGGTCCTGAAAAGGTTATCTAGTAAAAAGTGGAGG
AAAGCGATTCCGATAAACAAAATCCCTTCCAGCCTTTCTGTAGCTAAACTTGTATCGGAT
GAAATCGATGTGATGATGAGTCTTAATGAACCACTGAGTGGAAACATGGAAGTTGCACAG
AAAGCAATTCAAGAAGTACGCACTCAAATACCTCCTGAAATGTTCGATCTATCAAAAATC
ATTTGCGGAACATATTTAGATTCAAGATTGCTTGTCCTTCGAAGTGTAAATGGATCTGCA
CTCTTTTTCCATAGATGTACAAATGACAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016057
PEP Infomation

pacid=37459438 transcript=PGSC0003DMT400023542 locus=PGSC0003DMG400009120 ID=PGSC0003DMT400023542.v4.03 annot-version=v4.03
Sequence

MAAIGVYSTPKMEYVEGRCVSFINSSTSLKLWPMIGRTDFPIQRKRLEVNCSLPNTISPL
ESEENAATLSSSDSLEDEFSHVTKFEMSDFKIRNRVSIGLGGRGDEMVFEAMVNDPHSPL
YKTRVVLRQLISPRAKRRGHRAIEVLKRLARRKLMYHSYSMQVHGYICSSMIEEKSSFTL
VHGHHGSASLRHWLQRSDWLPTLEATLSLDQESVRRVGDDTIGGPAISRQLRLIRILMRD
LLIGVNYVHSHGLAHTELRLENLHISAVDKHIKVGILGNASDFNEADPADNTSYDNMDRR
RMMIAFDMRCVGFIMAKMVLRELMDPTIFAKFKAFLTKGNDLSCLREFLLHAVKRNSLAG
NFGIQILDRNWGAGWHLLSVLLAPKPLDRISCLNALRHPFLCGPKWRVNPSIDLIRWSLG
STTVRIAEEYIYGQQQRSRLAHFVELMEMLNPYPKPKHWLGLLPGKWRLLYCTGRHIGLT
LRQPSVRVLIREAYLTISKVSKPNTTFSVASHISFTVMAGRDWAHDKSGVGGKLQVDSFF
RLRAGRRLYLKEETISSKFPSATPDAQASVLKRLSSKKWRKAIPINKIPSSLSVAKLVSD
EIDVMMSLNEPLSGNMEVAQKAIQEVRTQIPPEMFDLSKIICGTYLDSRLLVLRSVNGSA
LFFHRCTNDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400023542
Transcript Infomation

pacid=37459438 locus=PGSC0003DMG400009120 ID=PGSC0003DMT400023542.v4.03 annot-version=v4.03
Sequence

ATGGCGGCTATCGGAGTATATTCAACTCCAAAAATGGAATATGTTGAAGGACGTTGCGTC
AGCTTTATTAATTCGTCGACTAGTCTTAAACTATGGCCTATGATTGGGAGAACGGACTTT
CCGATTCAGAGGAAAAGGTTGGAAGTGAATTGTTCATTGCCTAATACTATCTCTCCGTTA
GAATCGGAGGAGAATGCAGCAACCTTAAGTAGCAGTGATTCCCTAGAGGATGAGTTCAGT
CATGTAACGAAGTTCGAAATGTCAGATTTTAAGATACGGAATCGTGTCAGCATTGGCCTT
GGTGGCAGGGGAGATGAAATGGTGTTTGAAGCAATGGTGAATGATCCTCATAGTCCATTG
TATAAGACCAGAGTTGTACTTAGACAACTTATAAGTCCTCGAGCCAAGCGGAGAGGACAT
CGTGCAATAGAGGTGTTGAAGAGACTGGCACGTCGTAAGCTCATGTATCATTCGTACTCT
ATGCAAGTTCATGGGTATATCTGCTCATCCATGATAGAGGAGAAGAGTTCATTCACCCTA
GTCCATGGGCATCATGGAAGTGCTTCATTGAGACACTGGCTTCAACGATCTGACTGGCTT
CCAACTCTAGAAGCTACTCTTTCCCTAGATCAGGAGTCTGTTAGAAGGGTGGGGGATGAT
ACTATAGGAGGGCCAGCTATTTCTCGGCAACTGCGGCTAATCCGAATTTTAATGAGGGAT
CTCTTGATTGGAGTGAACTATGTGCACAGCCATGGCCTTGCGCATACAGAGTTGAGGCTT
GAAAATTTGCACATTAGCGCGGTGGATAAACATATTAAGGTAGGTATATTGGGAAATGCT
TCTGACTTTAATGAGGCTGATCCTGCGGATAACACATCATATGACAATATGGATAGGAGG
AGAATGATGATTGCATTTGACATGAGATGTGTTGGATTCATCATGGCAAAAATGGTTTTG
AGGGAACTCATGGACCCAACGATCTTTGCTAAGTTCAAAGCATTCCTCACCAAGGGAAAT
GATCTCTCCTGTTTGCGGGAGTTTCTTCTGCATGCTGTAAAAAGAAATTCTTTGGCCGGA
AACTTTGGTATACAAATACTCGATAGGAACTGGGGTGCAGGTTGGCATTTGCTTTCAGTA
CTCCTTGCACCTAAACCTTTGGACAGGATAAGTTGCTTAAATGCTCTGAGGCATCCCTTC
TTGTGTGGACCAAAATGGCGTGTGAACCCTTCTATTGATCTAATCAGATGGAGTCTTGGC
TCAACCACTGTTCGAATTGCAGAGGAATATATTTATGGGCAACAGCAGCGAAGTAGGCTT
GCTCATTTTGTCGAATTAATGGAGATGCTAAATCCTTATCCGAAGCCAAAGCATTGGCTG
GGATTGCTTCCTGGAAAGTGGCGCCTGTTATATTGTACCGGAAGACATATAGGGTTGACC
CTTCGACAGCCTTCTGTTAGAGTACTCATTCGGGAAGCATACCTAACGATATCTAAAGTG
TCAAAACCTAACACAACATTTTCAGTTGCCTCACACATTAGCTTCACTGTTATGGCTGGC
CGCGACTGGGCTCATGATAAGTCTGGTGTAGGGGGGAAATTGCAAGTTGATTCCTTTTTC
AGATTGAGAGCTGGGAGACGGTTATATCTTAAGGAGGAAACTATCAGCTCGAAGTTTCCG
TCAGCTACACCGGATGCTCAAGCTTCGGTCCTGAAAAGGTTATCTAGTAAAAAGTGGAGG
AAAGCGATTCCGATAAACAAAATCCCTTCCAGCCTTTCTGTAGCTAAACTTGTATCGGAT
GAAATCGATGTGATGATGAGTCTTAATGAACCACTGAGTGGAAACATGGAAGTTGCACAG
AAAGCAATTCAAGAAGTACGCACTCAAATACCTCCTGAAATGTTCGATCTATCAAAAATC
ATTTGCGGAACATATTTAGATTCAAGATTGCTTGTCCTTCGAAGTGTAAATGGATCTGCA
CTCTTTTTCCATAGATGTACAAATGACAGCTGA