Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023514
CDS Infomation

pacid=37459883 polypeptide=PGSC0003DMP400016036 locus=PGSC0003DMG400009110 ID=PGSC0003DMT400023514.v4.03 annot-version=v4.03
Sequence

ATGGAGTGCAACAAAGATGAGGCCTTCAGAGCAAAAAAAATTGCAGAGCGGAAGTTTGAA
CAGAAGGATTATGCTGGTGCAAAGAAATTTGCCTTGAAAGCTCAGGTTTTGTATCCAGGG
CTTGACGATCTAACCCAGATGTTAACAACACTTGATGTTTACATCTCTGCCGAAAACAAA
ATAAGTGGGGAAGTGGATTGGTATGGGGTACTTGGTGTGAGCCCGTCAAGTGATGATGAA
ACAGTGAAGAAACAGTACAGGAAGCTAGCTCTTGTCCTCCACCCTGATAAAAATAAATCT
ATTGGTGCTGAAGGTGCATTTAAACTTCTCTCTGAGGCCTGGAGCTTGTTATCTGATAAA
TCCAAGAGGTTGGCATATAACCAGAGAAGGAGTTCAAAAGGATTTCAGCAGAAACAACAG
AAAGTTCCAGTGCCCTCAGGTGGTCCATCAGCACCTCCACGAAATGGATTTCATAATTTT
ACTAGTAGGACTTCAGGTTCAAAGACTCAGAAAAATGCTTCTCGGATGCCCTCTTCATCA
GTCAATGCTTCATCCAATCAAAGAAGTGATACTTTCTGGACCATTTGCCACCGATGCAAG
ATGCATTATGAGTATTTGAAGATATATCTTAACCACACTCTTCTTTGCCCCAACTGTCAT
GAAGCTTTTATGGCTACAGAAACATCCCCACCGTTCAATCATTCAAAATCATCCAATTCT
ACTAGTCAGTGGCAGCAGAATCTAGGGAATCGTGCACCTAATGGAAATCAGTTCCCCATA
GGAAAAAATGCTAGTGCTGGTAAAACAGCAGGATCAGCAGCAGCAAGTTCTAATACTGCG
AAATACTCAAACTTTCAGCAGGATCCATTTTCCAGAATGGGTGGTGTTGGTAGCTCGGAT
CCTTCCATTGCAGCAAAAGCAGCAAATGTTGTCCAGCAGGCACATGAGAGAATGAAGAGA
GAACGTGATGATTCACAGACTAGACAGACAGCTTTTAAACAGAGAAGGCTCGATGAGGAT
GGAATGCGTTTTGGATCCAATGCACCTCACTATGCTGAAAGGACTTATGGTTTTTCTTCT
AGCAAGTTTAATAGTACCAGGGAGCTGACACCACTTGAAAACCGGAATATGCTGATGGGG
AAAGCTCGGAAAGAGATACTTAAGAAGTTGAATGAATGGAGATTGCAGCCGCAAGATGCA
CAAAAATACAAGGTAAAAGAGGGCAAAAAAGAAAAACAGAGGACTGCTAATGTTCTTGGT
CATAATGTAAACGGGAATGTAGAGTTATCAGCTATGAAGGGAGTAAAGAAAGGTGTCAAT
GCTTCAGCTAATGATGCACATCAAGAGGATCCAGTGCCAGAATCAATGAATGTACCAGAT
CCTGATTTTCATAATTTCGACCAGGATAGGAGTGAAAGTTGTTTCGAAGACAATGAAGTC
TGGGCTTCATATGATGCTGATGATGGCATGCCCCGTTTCTATGCTCTGATAAACAAAGTC
CTCTCAAGGGAACCATTTAAAGTGAGGCACAGTTGGCTTAATTCAAAAACAAACAATGAA
TTTGGTCCAATGGAATGGGTAGCTTCAGGTTTCTACAAAACTTCTGGTGAATTTAGGATT
GGTAGATACGAAATGGGTAAGTCGGTGAATTCCTTCTCCCACAAGGTTCGGTGGTCAAAG
GGCCCTCGTGGAACTGTTCTAATATATCCCCAAAAGGGGGATGTTTGGGCCCTCTACAGA
AATTGGTCTGCTGACTGGAATCAGAATACACCTGATGATGTTATACACAAGTATGACATG
GTCCTAGTTCTTGACGACTACAATGAGGAGCAAGGAATTTCAGTAGCTCCTCTCATCAAA
GTTGCTGGTTTTAAGACGGTCTTTCGTCCAGACTTGAATTCAGAGAAGGTGATGAGAATA
ACCAGAGAAGAGATGTTTCGTTTCTCTCATCAGGTCCCAAGCCACTTGCTTACAGGTGAA
GAAGGTCAAAATGCTCCAAAGGGTTGCCAGGAGCTTGATCCAGCTGCTACTCCATTGGAG
CTTCTTCAGACACTAACAGAAACTAATGAGATGCCAGCCATGCAGAACGACAAAGAGGCC
AATGGAGGTTCATCACAGAATGTTCAGGAAACCAAAACTAGTGAGACTGCTGATCATACT
CTCAAATCCAGGGAAGGCGGGATGGTAGAAAGTGAAGGAGCTCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400016036
PEP Infomation

pacid=37459883 transcript=PGSC0003DMT400023514 locus=PGSC0003DMG400009110 ID=PGSC0003DMT400023514.v4.03 annot-version=v4.03
Sequence

MECNKDEAFRAKKIAERKFEQKDYAGAKKFALKAQVLYPGLDDLTQMLTTLDVYISAENK
ISGEVDWYGVLGVSPSSDDETVKKQYRKLALVLHPDKNKSIGAEGAFKLLSEAWSLLSDK
SKRLAYNQRRSSKGFQQKQQKVPVPSGGPSAPPRNGFHNFTSRTSGSKTQKNASRMPSSS
VNASSNQRSDTFWTICHRCKMHYEYLKIYLNHTLLCPNCHEAFMATETSPPFNHSKSSNS
TSQWQQNLGNRAPNGNQFPIGKNASAGKTAGSAAASSNTAKYSNFQQDPFSRMGGVGSSD
PSIAAKAANVVQQAHERMKRERDDSQTRQTAFKQRRLDEDGMRFGSNAPHYAERTYGFSS
SKFNSTRELTPLENRNMLMGKARKEILKKLNEWRLQPQDAQKYKVKEGKKEKQRTANVLG
HNVNGNVELSAMKGVKKGVNASANDAHQEDPVPESMNVPDPDFHNFDQDRSESCFEDNEV
WASYDADDGMPRFYALINKVLSREPFKVRHSWLNSKTNNEFGPMEWVASGFYKTSGEFRI
GRYEMGKSVNSFSHKVRWSKGPRGTVLIYPQKGDVWALYRNWSADWNQNTPDDVIHKYDM
VLVLDDYNEEQGISVAPLIKVAGFKTVFRPDLNSEKVMRITREEMFRFSHQVPSHLLTGE
EGQNAPKGCQELDPAATPLELLQTLTETNEMPAMQNDKEANGGSSQNVQETKTSETADHT
LKSREGGMVESEGAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400023514
Transcript Infomation

pacid=37459883 locus=PGSC0003DMG400009110 ID=PGSC0003DMT400023514.v4.03 annot-version=v4.03
Sequence

ATGGAGTGCAACAAAGATGAGGCCTTCAGAGCAAAAAAAATTGCAGAGCGGAAGTTTGAA
CAGAAGGATTATGCTGGTGCAAAGAAATTTGCCTTGAAAGCTCAGGTTTTGTATCCAGGG
CTTGACGATCTAACCCAGATGTTAACAACACTTGATGTTTACATCTCTGCCGAAAACAAA
ATAAGTGGGGAAGTGGATTGGTATGGGGTACTTGGTGTGAGCCCGTCAAGTGATGATGAA
ACAGTGAAGAAACAGTACAGGAAGCTAGCTCTTGTCCTCCACCCTGATAAAAATAAATCT
ATTGGTGCTGAAGGTGCATTTAAACTTCTCTCTGAGGCCTGGAGCTTGTTATCTGATAAA
TCCAAGAGGTTGGCATATAACCAGAGAAGGAGTTCAAAAGGATTTCAGCAGAAACAACAG
AAAGTTCCAGTGCCCTCAGGTGGTCCATCAGCACCTCCACGAAATGGATTTCATAATTTT
ACTAGTAGGACTTCAGGTTCAAAGACTCAGAAAAATGCTTCTCGGATGCCCTCTTCATCA
GTCAATGCTTCATCCAATCAAAGAAGTGATACTTTCTGGACCATTTGCCACCGATGCAAG
ATGCATTATGAGTATTTGAAGATATATCTTAACCACACTCTTCTTTGCCCCAACTGTCAT
GAAGCTTTTATGGCTACAGAAACATCCCCACCGTTCAATCATTCAAAATCATCCAATTCT
ACTAGTCAGTGGCAGCAGAATCTAGGGAATCGTGCACCTAATGGAAATCAGTTCCCCATA
GGAAAAAATGCTAGTGCTGGTAAAACAGCAGGATCAGCAGCAGCAAGTTCTAATACTGCG
AAATACTCAAACTTTCAGCAGGATCCATTTTCCAGAATGGGTGGTGTTGGTAGCTCGGAT
CCTTCCATTGCAGCAAAAGCAGCAAATGTTGTCCAGCAGGCACATGAGAGAATGAAGAGA
GAACGTGATGATTCACAGACTAGACAGACAGCTTTTAAACAGAGAAGGCTCGATGAGGAT
GGAATGCGTTTTGGATCCAATGCACCTCACTATGCTGAAAGGACTTATGGTTTTTCTTCT
AGCAAGTTTAATAGTACCAGGGAGCTGACACCACTTGAAAACCGGAATATGCTGATGGGG
AAAGCTCGGAAAGAGATACTTAAGAAGTTGAATGAATGGAGATTGCAGCCGCAAGATGCA
CAAAAATACAAGGTAAAAGAGGGCAAAAAAGAAAAACAGAGGACTGCTAATGTTCTTGGT
CATAATGTAAACGGGAATGTAGAGTTATCAGCTATGAAGGGAGTAAAGAAAGGTGTCAAT
GCTTCAGCTAATGATGCACATCAAGAGGATCCAGTGCCAGAATCAATGAATGTACCAGAT
CCTGATTTTCATAATTTCGACCAGGATAGGAGTGAAAGTTGTTTCGAAGACAATGAAGTC
TGGGCTTCATATGATGCTGATGATGGCATGCCCCGTTTCTATGCTCTGATAAACAAAGTC
CTCTCAAGGGAACCATTTAAAGTGAGGCACAGTTGGCTTAATTCAAAAACAAACAATGAA
TTTGGTCCAATGGAATGGGTAGCTTCAGGTTTCTACAAAACTTCTGGTGAATTTAGGATT
GGTAGATACGAAATGGGTAAGTCGGTGAATTCCTTCTCCCACAAGGTTCGGTGGTCAAAG
GGCCCTCGTGGAACTGTTCTAATATATCCCCAAAAGGGGGATGTTTGGGCCCTCTACAGA
AATTGGTCTGCTGACTGGAATCAGAATACACCTGATGATGTTATACACAAGTATGACATG
GTCCTAGTTCTTGACGACTACAATGAGGAGCAAGGAATTTCAGTAGCTCCTCTCATCAAA
GTTGCTGGTTTTAAGACGGTCTTTCGTCCAGACTTGAATTCAGAGAAGGTGATGAGAATA
ACCAGAGAAGAGATGTTTCGTTTCTCTCATCAGGTCCCAAGCCACTTGCTTACAGGTGAA
GAAGGTCAAAATGCTCCAAAGGGTTGCCAGGAGCTTGATCCAGCTGCTACTCCATTGGAG
CTTCTTCAGACACTAACAGAAACTAATGAGATGCCAGCCATGCAGAACGACAAAGAGGCC
AATGGAGGTTCATCACAGAATGTTCAGGAAACCAAAACTAGTGAGACTGCTGATCATACT
CTCAAATCCAGGGAAGGCGGGATGGTAGAAAGTGAAGGAGCTCCATGA