Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023505
CDS Infomation

pacid=37459611 polypeptide=PGSC0003DMP400016029 locus=PGSC0003DMG400009105 ID=PGSC0003DMT400023505.v4.03 annot-version=v4.03
Sequence

ATGACCACTCTTCAAGCTTCTCTTCTCTTCAAGCCTTTACCTCCTCTTTTCCATTTTTCT
TCCTCAAAACATGTTCGGTCCATTTCTTTCTCCAACCCTTTATCCCGTCTTCGTTTATCT
ACAACTGCATCTACTCCTTTCAAGACTCGATTTTGCCGCCACAATTTACTGCTTCATTGT
ACATTGAATCCTGAACAAGTCGATTCCTCATCGGAATTTACCTTATCTAATAATGACAAT
TCTATTCCGGAGATTGAACCCCTAGAATTCAATGAACCATCTGTTGTTGAGATTGGTTTC
GTTCAAAATTCTTCCATTGACTCGAATGGTGGAGTTGTGAATAATGTTTCTGATAATGAA
GCCGGTCATGTGGAATCATCTGAGGTTTTGGTGGACAATGATGAACTGAAGAAAAAACTG
CCTATACTGGTTTTTTTGATGGGGGTATTTGCAAAGGTGAAGAAAGGGTTTGAGAATATT
TTGCTGTCGGATTGGTTTAGCTGGTGGCCGTTTTGGCAGCAAGAGAAACGTCTGGAGAGA
TTGATAGCGGATGCCGATGCAAATCCGAACGATGCTGCTATGCAGAGTGCTTTGCTTGCT
GAACTCAACAAGCACAGCCCTGAGTCTGTCATTCGGCGCTTTGAGCAGAGAGCTCATGCT
GTAGACAGTAGAGGAGTTGCAGAATATATGCGAGCTCTTGTGGCTACAAATGCTATTGCT
GAATATCTACCTGATGAGCAATCTGGAAAGCCTTCCAGTCTTCCTTCACTGTTGCAAGAG
TTGAAGCAACGGGCATCAGGGAACATGGATGAACCCTTTTTAAATCCTGGCATTTCCGAG
AAGCAGCCATTACATGTTGTGATGGTTGATCCTAAAGTTTCAAACAGATCATCACGTTTC
GCGCAAGAGTTTCTCTCAACTATCATATTCACTATTGCCATTGGCTTGGTCTGGATAATG
GGTGCTACTGCACTTCAGAAATATATTGGTGGCTTAGGTGGGATAGGAGCTTCAGGTGTT
GGTTCAAGCTCATCCTATGCCCCGAAAGAATTGAATAAAGAAATAATGCCTGAGAAGAAT
GTCAAAACGTTTAAGGATGTCAAAGGTTGTGATGATGCTAAGCAAGAGCTTGAGGAGGTT
GTTGAGTACCTAAAAAATCCTTCTAAGTTCACTCGGCTTGGAGGAAAGTTGCCGAAGGGA
ATTCTTTTGACTGGAGCACCTGGAACAGGAAAAACTCTCCTTGCCAAGGCTATCGCTGGA
GAAGCAGGGGTGCCTTTCTTTTATAAGGCAGGCTCTGAATTTGAAGAAATGTTTGTAGGA
GTTGGTGCTCGGCGTGTGAGATCTTTGTTTCAAGCTGCTAAGAAGAAGGCTCCATGCATC
ATATTTATTGATGAAATTGATGCTGTTGGATCAACTCGAAAGCAGTGGGAAGGGCACACT
AAGAAAACACTGCATCAATTACTTGTTGAGATGGATGGTTTTGAGCAAAATGAGGGCATA
ATATTGATGGCTGCGACAAACTTGCCTGATATTCTTGATCCTGCCTTGACAAGACCCGGT
AGATTTGATAGGCATATTGTGGTTCCCAATCCAGATGTGCGGGGTCGTCAAGAGATCTTA
GAGCTTTATTTGCAAGACAAACCAGTTAGTGATGATGTCAATGTGAATGCGATTGCTCGT
GGAACACCAGGATTCAATGGAGCAGATTTGGCAAATCTGGTGAATATTGCTGCCATTAAG
GCTGCTGTTGAAGGTGCTGAGAAGCTAAATGCATCACAGTTGGAGTTTGCAAAAGATAGA
ATAATAATGGGAACAGAACGCAAAACCATGTTCCTTTCAGAAGACTCAAAAAAGCTAACT
GCATATCACGAGAGTGGCCATGCAATTGTTGCCTTGAATACTGAAGGCGCACATCCAATA
CATAAAGCTACAATCATGCCACGTGGGTCTGCTTTGGGAATGGTTACACAGCTTCCTTCA
AATGATGAGACATCAATCAGCAAAAAGCAGTTGTTAGCACGGCTTGATGTTTGTATGGGA
GGAAGAGTAGCCGAGGAGCTGGTCTTTGGTCCAGACAATGTAACTACTGGGGCTAGTAGT
GACCTACACACAGCTACAGAACTTGCTCAATACATGGTATCATCCTGTGGGATGAGTGAT
GCAATTGGACCTGTTCACATCAAAGAGCGGCCAAGTGCTGAAATGCAATCACGTATGGAT
GCTGAGGTGGTCAAACTTCTAAGAGAAGCATATGATCGCGTAAAGGCCCTCCTAAAGAAG
CATGAAAAGGCTCTACACACTCTGGCAACTGCCCTTCTAGAGTGCGAAACATTGACTTCA
GAAGATATAAGGCGGATTCTTCTCCCTTTCTCTGAAGACCGGCTCTCTGAACAACAGCAG
CAGCAGCAGCCTCAGGACGAAGAAACTCTCGCATTGGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016029
PEP Infomation

pacid=37459611 transcript=PGSC0003DMT400023505 locus=PGSC0003DMG400009105 ID=PGSC0003DMT400023505.v4.03 annot-version=v4.03
Sequence

MTTLQASLLFKPLPPLFHFSSSKHVRSISFSNPLSRLRLSTTASTPFKTRFCRHNLLLHC
TLNPEQVDSSSEFTLSNNDNSIPEIEPLEFNEPSVVEIGFVQNSSIDSNGGVVNNVSDNE
AGHVESSEVLVDNDELKKKLPILVFLMGVFAKVKKGFENILLSDWFSWWPFWQQEKRLER
LIADADANPNDAAMQSALLAELNKHSPESVIRRFEQRAHAVDSRGVAEYMRALVATNAIA
EYLPDEQSGKPSSLPSLLQELKQRASGNMDEPFLNPGISEKQPLHVVMVDPKVSNRSSRF
AQEFLSTIIFTIAIGLVWIMGATALQKYIGGLGGIGASGVGSSSSYAPKELNKEIMPEKN
VKTFKDVKGCDDAKQELEEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAG
EAGVPFFYKAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHT
KKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEIL
ELYLQDKPVSDDVNVNAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLNASQLEFAKDR
IIMGTERKTMFLSEDSKKLTAYHESGHAIVALNTEGAHPIHKATIMPRGSALGMVTQLPS
NDETSISKKQLLARLDVCMGGRVAEELVFGPDNVTTGASSDLHTATELAQYMVSSCGMSD
AIGPVHIKERPSAEMQSRMDAEVVKLLREAYDRVKALLKKHEKALHTLATALLECETLTS
EDIRRILLPFSEDRLSEQQQQQQPQDEETLALV*

Transcript Sequence

Transcript ID

PGSC0003DMT400023505
Transcript Infomation

pacid=37459611 locus=PGSC0003DMG400009105 ID=PGSC0003DMT400023505.v4.03 annot-version=v4.03
Sequence

ATGACCACTCTTCAAGCTTCTCTTCTCTTCAAGCCTTTACCTCCTCTTTTCCATTTTTCT
TCCTCAAAACATGTTCGGTCCATTTCTTTCTCCAACCCTTTATCCCGTCTTCGTTTATCT
ACAACTGCATCTACTCCTTTCAAGACTCGATTTTGCCGCCACAATTTACTGCTTCATTGT
ACATTGAATCCTGAACAAGTCGATTCCTCATCGGAATTTACCTTATCTAATAATGACAAT
TCTATTCCGGAGATTGAACCCCTAGAATTCAATGAACCATCTGTTGTTGAGATTGGTTTC
GTTCAAAATTCTTCCATTGACTCGAATGGTGGAGTTGTGAATAATGTTTCTGATAATGAA
GCCGGTCATGTGGAATCATCTGAGGTTTTGGTGGACAATGATGAACTGAAGAAAAAACTG
CCTATACTGGTTTTTTTGATGGGGGTATTTGCAAAGGTGAAGAAAGGGTTTGAGAATATT
TTGCTGTCGGATTGGTTTAGCTGGTGGCCGTTTTGGCAGCAAGAGAAACGTCTGGAGAGA
TTGATAGCGGATGCCGATGCAAATCCGAACGATGCTGCTATGCAGAGTGCTTTGCTTGCT
GAACTCAACAAGCACAGCCCTGAGTCTGTCATTCGGCGCTTTGAGCAGAGAGCTCATGCT
GTAGACAGTAGAGGAGTTGCAGAATATATGCGAGCTCTTGTGGCTACAAATGCTATTGCT
GAATATCTACCTGATGAGCAATCTGGAAAGCCTTCCAGTCTTCCTTCACTGTTGCAAGAG
TTGAAGCAACGGGCATCAGGGAACATGGATGAACCCTTTTTAAATCCTGGCATTTCCGAG
AAGCAGCCATTACATGTTGTGATGGTTGATCCTAAAGTTTCAAACAGATCATCACGTTTC
GCGCAAGAGTTTCTCTCAACTATCATATTCACTATTGCCATTGGCTTGGTCTGGATAATG
GGTGCTACTGCACTTCAGAAATATATTGGTGGCTTAGGTGGGATAGGAGCTTCAGGTGTT
GGTTCAAGCTCATCCTATGCCCCGAAAGAATTGAATAAAGAAATAATGCCTGAGAAGAAT
GTCAAAACGTTTAAGGATGTCAAAGGTTGTGATGATGCTAAGCAAGAGCTTGAGGAGGTT
GTTGAGTACCTAAAAAATCCTTCTAAGTTCACTCGGCTTGGAGGAAAGTTGCCGAAGGGA
ATTCTTTTGACTGGAGCACCTGGAACAGGAAAAACTCTCCTTGCCAAGGCTATCGCTGGA
GAAGCAGGGGTGCCTTTCTTTTATAAGGCAGGCTCTGAATTTGAAGAAATGTTTGTAGGA
GTTGGTGCTCGGCGTGTGAGATCTTTGTTTCAAGCTGCTAAGAAGAAGGCTCCATGCATC
ATATTTATTGATGAAATTGATGCTGTTGGATCAACTCGAAAGCAGTGGGAAGGGCACACT
AAGAAAACACTGCATCAATTACTTGTTGAGATGGATGGTTTTGAGCAAAATGAGGGCATA
ATATTGATGGCTGCGACAAACTTGCCTGATATTCTTGATCCTGCCTTGACAAGACCCGGT
AGATTTGATAGGCATATTGTGGTTCCCAATCCAGATGTGCGGGGTCGTCAAGAGATCTTA
GAGCTTTATTTGCAAGACAAACCAGTTAGTGATGATGTCAATGTGAATGCGATTGCTCGT
GGAACACCAGGATTCAATGGAGCAGATTTGGCAAATCTGGTGAATATTGCTGCCATTAAG
GCTGCTGTTGAAGGTGCTGAGAAGCTAAATGCATCACAGTTGGAGTTTGCAAAAGATAGA
ATAATAATGGGAACAGAACGCAAAACCATGTTCCTTTCAGAAGACTCAAAAAAGCTAACT
GCATATCACGAGAGTGGCCATGCAATTGTTGCCTTGAATACTGAAGGCGCACATCCAATA
CATAAAGCTACAATCATGCCACGTGGGTCTGCTTTGGGAATGGTTACACAGCTTCCTTCA
AATGATGAGACATCAATCAGCAAAAAGCAGTTGTTAGCACGGCTTGATGTTTGTATGGGA
GGAAGAGTAGCCGAGGAGCTGGTCTTTGGTCCAGACAATGTAACTACTGGGGCTAGTAGT
GACCTACACACAGCTACAGAACTTGCTCAATACATGGTATCATCCTGTGGGATGAGTGAT
GCAATTGGACCTGTTCACATCAAAGAGCGGCCAAGTGCTGAAATGCAATCACGTATGGAT
GCTGAGGTGGTCAAACTTCTAAGAGAAGCATATGATCGCGTAAAGGCCCTCCTAAAGAAG
CATGAAAAGGCTCTACACACTCTGGCAACTGCCCTTCTAGAGTGCGAAACATTGACTTCA
GAAGATATAAGGCGGATTCTTCTCCCTTTCTCTGAAGACCGGCTCTCTGAACAACAGCAG
CAGCAGCAGCCTCAGGACGAAGAAACTCTCGCATTGGTTTAG