Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023497
CDS Infomation

pacid=37463786 polypeptide=PGSC0003DMP400016023 locus=PGSC0003DMG400009101 ID=PGSC0003DMT400023497.v4.03 annot-version=v4.03
Sequence

ATGGATGGTGACCAAAGTTTATCTGATTTATTTGAAGATTCTGAATGTGATATCTTCAGT
ATTTTAGAGGCTTTAGAAGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTAGTAGTAGTATT
AATTCGGAATTTTATAATAATACCAACAACCAGACTACAACCACAACCACGACCACAACC
TCTGATGAAATTACGGGTTTGGTGTCTGAAGAAGGGAGGAAGAGGAAGTTAGTTTCTCAA
AAATCTACGGGTTCGAGTGCAACTTTACAAGAAGAGGAAACTCATGAAGCAGATACACCA
AGTAGCAAGAGGCAAAATTTAGCAGCGGTTATAAGTGGTGGGATAGAAAATAAGATTTCT
CATATAACAGTTGAAAGGAACCGCCGCAAACAAATGAATGACCATCTATCTGTGCTACGC
ACTTTGATGCCTTGTTTTTATGCTAAGCGAGGTGATCAAGCATCAATAATTGGTGGGGTT
GTTGATTACATAAACGAGCTACAACAAGTTCTCCAATCCTTAGAAGCCAAGAAGCAACGC
AAAGTTTATAGTGAAGTTTTAAGTCCAAGAGTACTACCACCACAACTAGTCCCAATTAGT
CCAAGACTAATAACACCTTCACCATTAAGTCCAAGAAAACCACCACTTAGTCCCAGAATG
AACTTACCAATTAGCCCAAGAACCCCACAACCCACAAGTCCATATAAGCCTAATAATATT
AATAATAAAGCTAACAAGCCACTTGAACCATCTCCTACTACTTCATCAAATTCTTCCATT
GATAGTCATGTCAATAATGAGCTGGCTGCTAATTCAAAGTCAGCCATTGCTGACGTGGAA
GTGAAATTCTCCGGCGCGAATGTCATATTGAAGACCGTGTCTCCACGTATTCCTGGCCAG
GCTGTGAAGATCATTGCTGCTTTAGAACAACTCGCACTTGAAATACTCCATGTTAGCATC
AGTACTATTGATGGTACCATGCTCAACTCCTTCACCATTAAGATTGGAATTGAATGCCAA
CTTAGTGCTGAAGAACTGGCTCATCAGATTCAGCAGACATTCTGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400016023
PEP Infomation

pacid=37463786 transcript=PGSC0003DMT400023497 locus=PGSC0003DMG400009101 ID=PGSC0003DMT400023497.v4.03 annot-version=v4.03
Sequence

MDGDQSLSDLFEDSECDIFSILEALEGGGGGGGGGGSSSINSEFYNNTNNQTTTTTTTTT
SDEITGLVSEEGRKRKLVSQKSTGSSATLQEEETHEADTPSSKRQNLAAVISGGIENKIS
HITVERNRRKQMNDHLSVLRTLMPCFYAKRGDQASIIGGVVDYINELQQVLQSLEAKKQR
KVYSEVLSPRVLPPQLVPISPRLITPSPLSPRKPPLSPRMNLPISPRTPQPTSPYKPNNI
NNKANKPLEPSPTTSSNSSIDSHVNNELAANSKSAIADVEVKFSGANVILKTVSPRIPGQ
AVKIIAALEQLALEILHVSISTIDGTMLNSFTIKIGIECQLSAEELAHQIQQTFC*

Transcript Sequence

Transcript ID

PGSC0003DMT400023497
Transcript Infomation

pacid=37463786 locus=PGSC0003DMG400009101 ID=PGSC0003DMT400023497.v4.03 annot-version=v4.03
Sequence

ATGGATGGTGACCAAAGTTTATCTGATTTATTTGAAGATTCTGAATGTGATATCTTCAGT
ATTTTAGAGGCTTTAGAAGGCGGTGGAGGTGGAGGTGGAGGTGGAGGTAGTAGTAGTATT
AATTCGGAATTTTATAATAATACCAACAACCAGACTACAACCACAACCACGACCACAACC
TCTGATGAAATTACGGGTTTGGTGTCTGAAGAAGGGAGGAAGAGGAAGTTAGTTTCTCAA
AAATCTACGGGTTCGAGTGCAACTTTACAAGAAGAGGAAACTCATGAAGCAGATACACCA
AGTAGCAAGAGGCAAAATTTAGCAGCGGTTATAAGTGGTGGGATAGAAAATAAGATTTCT
CATATAACAGTTGAAAGGAACCGCCGCAAACAAATGAATGACCATCTATCTGTGCTACGC
ACTTTGATGCCTTGTTTTTATGCTAAGCGAGGTGATCAAGCATCAATAATTGGTGGGGTT
GTTGATTACATAAACGAGCTACAACAAGTTCTCCAATCCTTAGAAGCCAAGAAGCAACGC
AAAGTTTATAGTGAAGTTTTAAGTCCAAGAGTACTACCACCACAACTAGTCCCAATTAGT
CCAAGACTAATAACACCTTCACCATTAAGTCCAAGAAAACCACCACTTAGTCCCAGAATG
AACTTACCAATTAGCCCAAGAACCCCACAACCCACAAGTCCATATAAGCCTAATAATATT
AATAATAAAGCTAACAAGCCACTTGAACCATCTCCTACTACTTCATCAAATTCTTCCATT
GATAGTCATGTCAATAATGAGCTGGCTGCTAATTCAAAGTCAGCCATTGCTGACGTGGAA
GTGAAATTCTCCGGCGCGAATGTCATATTGAAGACCGTGTCTCCACGTATTCCTGGCCAG
GCTGTGAAGATCATTGCTGCTTTAGAACAACTCGCACTTGAAATACTCCATGTTAGCATC
AGTACTATTGATGGTACCATGCTCAACTCCTTCACCATTAAGATTGGAATTGAATGCCAA
CTTAGTGCTGAAGAACTGGCTCATCAGATTCAGCAGACATTCTGCTAA