Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023490
CDS Infomation

pacid=37461907 polypeptide=PGSC0003DMP400016017 locus=PGSC0003DMG400009096 ID=PGSC0003DMT400023490.v4.03 annot-version=v4.03
Sequence

ATGGTTCGAGAAAAAGACGTCTGTTGGGAATATGCTGAGAAGTTAGACGGGAATAAAGTG
AGGTGTAAATTCTGTCTTAGAATTTTAAATGGTGGCATTAGTAGGTTAAAACACCACTTA
TCAAGACTTCCCAGTAAAGGTGTGAATCCATGTACTAAGGTCAGGGATGATGTTACTGAC
AGGGTAAGGGATATAATAGGATCAAAGGAACCTCCTAGTACTAAAAAGCATAAGCTCATT
GAGACAAAAGCTCTTGCAAATATCTCTCCGGAAAAACTGCTTTTATCTGTGGAACCAATA
ACTCCAATTGCAAGAATTTTTCCACCAATTGGGCAGGCTATTTCTTCATCTGGAAATAAC
CAAGAAAATGCTGAGAGGAGTATTGCATTGTTCTTTTTTGAGAACAAAATTGACTTTGGT
GTAGCAAGATCTTCCTCTTACCATCAAATGATTGAGGCAGTAGGGAAGTGTGGCAGTGGG
TTTATAGGTCCTTCTCCTGAAACTCTGAAAGCAACATGGTTGGAGAGAATCAAGTCTGAA
GTAAGTTTACAGTCAAAAGATGTTGAGAAAGAGTGGGCTATGACAGGTTGCACTTTAATT
GCAGAAACATGGACGGACAACAAAATGAAAGCTTTGATCAACTTCTTGGTTTCATCGCCC
TCCAGGACTTTTTTCTACAAATCTGTAGATGCATCTTCATATTTTAAGAATCTGAAATGC
CTCTCTGAGTTGTTTGATTCAATCATTCAAGATTTTGGACCAGAGAATGTTGTACAGGTA
ATTGTGGATAATACACTTCACTGCACTGGTATAGTGAACCATATCTTGCAGAACTATGGG
AATGTTTTTGTGTCCCCTTGTGCTTCACAGTGTATAAATGCAATTTTAGACGAGTTTTCA
AAATTAGATTGGGTAAATAGATGCATTTTACAGGCACAATCAATCTCGAAGTTTATATAC
AACAATTCTCCATTGCTTGATCTCATGAAAAAGTTCACTGGAGGACAAGAGATCATTAAG
ACTGGTATCACGAAGTCTGTGTCAAACTTTCTCTCCTTGCAATGTCTATTGAAGCATAGG
TCAAGATTGAAAGTTATTTTTAACAGTCCAGAGCTTGCTGCCAATTCTGCTTATACAAAC
AAATCGCAAAGTGTTAATTGTATCGCAATTCTGGATGACAATGACTTTTGGAGGACAGCT
GAAGAGTGTGTTGCTGTTTCTGAACCCTTTCTCAAAGTTATGAGAGAAGTTTCTGGAGGA
AAGCCAGCTGTGGGCACTATATATGAACTACTGACCAGAGCAAAGGAATCTATAAGGACA
TACTATATTATGGATGAAATAAAGTGCAAGACATTTTTAGATATAGTGGATAAGAACTGG
AAGAACAACCTCCACTCTCCTCTGCATTCAGCAGCTGCCTTTTTGAATCCTGGCATCCAA
TATAACCGAGAAGTCAAGTTTCTTGGGTCAATAAAAGAAGATTTTTTCAGAGTGCTGGAG
AAGCTGCTACCAACTCCCGAACTGAGGCGAGATATCACTACTCAAATCCTTTTATATACA
CGTGCATCTGGGATGTTTGGTTGTAATCTGGCGAAGGAAGCAATTGATACTGTTCCTCCA
GGTATCTGGTGGGAACAGTATGGTGATGCTGCTCCTACATTACAAAGAGTTGCTATTAAA
ATACTTAGCCAGGTGTGCAGTACGTTCACTTTTGAGCGACATTGGAGCACATTTCAGCAA
ATCCATTCTGAGAAGCGCAATAAGATTGATAAGGAAACACTTTTAGACCTTGTTTACATA
AATTATAATCTGAAGCTAGCACGGTATTTGGTTTCTAAACCTCCTGAGGAAGATCCTCTC
CAACTTGATGACATAGATATGACATCTGAGTGGGTGGAAGAGGCAGAAAATCCTAGTCCA
ACTCAGTGGCTTGATAGATTTGGTTCAGGTCTGGATGGGAATGACTTGAACACACGACAA
TTTACTGCTGCAATATTTGGTCCCGGTGACAACATATTTGGTTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400016017
PEP Infomation

pacid=37461907 transcript=PGSC0003DMT400023490 locus=PGSC0003DMG400009096 ID=PGSC0003DMT400023490.v4.03 annot-version=v4.03
Sequence

MVREKDVCWEYAEKLDGNKVRCKFCLRILNGGISRLKHHLSRLPSKGVNPCTKVRDDVTD
RVRDIIGSKEPPSTKKHKLIETKALANISPEKLLLSVEPITPIARIFPPIGQAISSSGNN
QENAERSIALFFFENKIDFGVARSSSYHQMIEAVGKCGSGFIGPSPETLKATWLERIKSE
VSLQSKDVEKEWAMTGCTLIAETWTDNKMKALINFLVSSPSRTFFYKSVDASSYFKNLKC
LSELFDSIIQDFGPENVVQVIVDNTLHCTGIVNHILQNYGNVFVSPCASQCINAILDEFS
KLDWVNRCILQAQSISKFIYNNSPLLDLMKKFTGGQEIIKTGITKSVSNFLSLQCLLKHR
SRLKVIFNSPELAANSAYTNKSQSVNCIAILDDNDFWRTAEECVAVSEPFLKVMREVSGG
KPAVGTIYELLTRAKESIRTYYIMDEIKCKTFLDIVDKNWKNNLHSPLHSAAAFLNPGIQ
YNREVKFLGSIKEDFFRVLEKLLPTPELRRDITTQILLYTRASGMFGCNLAKEAIDTVPP
GIWWEQYGDAAPTLQRVAIKILSQVCSTFTFERHWSTFQQIHSEKRNKIDKETLLDLVYI
NYNLKLARYLVSKPPEEDPLQLDDIDMTSEWVEEAENPSPTQWLDRFGSGLDGNDLNTRQ
FTAAIFGPGDNIFGL*

Transcript Sequence

Transcript ID

PGSC0003DMT400023490
Transcript Infomation

pacid=37461907 locus=PGSC0003DMG400009096 ID=PGSC0003DMT400023490.v4.03 annot-version=v4.03
Sequence

ATGGTTCGAGAAAAAGACGTCTGTTGGGAATATGCTGAGAAGTTAGACGGGAATAAAGTG
AGGTGTAAATTCTGTCTTAGAATTTTAAATGGTGGCATTAGTAGGTTAAAACACCACTTA
TCAAGACTTCCCAGTAAAGGTGTGAATCCATGTACTAAGGTCAGGGATGATGTTACTGAC
AGGGTAAGGGATATAATAGGATCAAAGGAACCTCCTAGTACTAAAAAGCATAAGCTCATT
GAGACAAAAGCTCTTGCAAATATCTCTCCGGAAAAACTGCTTTTATCTGTGGAACCAATA
ACTCCAATTGCAAGAATTTTTCCACCAATTGGGCAGGCTATTTCTTCATCTGGAAATAAC
CAAGAAAATGCTGAGAGGAGTATTGCATTGTTCTTTTTTGAGAACAAAATTGACTTTGGT
GTAGCAAGATCTTCCTCTTACCATCAAATGATTGAGGCAGTAGGGAAGTGTGGCAGTGGG
TTTATAGGTCCTTCTCCTGAAACTCTGAAAGCAACATGGTTGGAGAGAATCAAGTCTGAA
GTAAGTTTACAGTCAAAAGATGTTGAGAAAGAGTGGGCTATGACAGGTTGCACTTTAATT
GCAGAAACATGGACGGACAACAAAATGAAAGCTTTGATCAACTTCTTGGTTTCATCGCCC
TCCAGGACTTTTTTCTACAAATCTGTAGATGCATCTTCATATTTTAAGAATCTGAAATGC
CTCTCTGAGTTGTTTGATTCAATCATTCAAGATTTTGGACCAGAGAATGTTGTACAGGTA
ATTGTGGATAATACACTTCACTGCACTGGTATAGTGAACCATATCTTGCAGAACTATGGG
AATGTTTTTGTGTCCCCTTGTGCTTCACAGTGTATAAATGCAATTTTAGACGAGTTTTCA
AAATTAGATTGGGTAAATAGATGCATTTTACAGGCACAATCAATCTCGAAGTTTATATAC
AACAATTCTCCATTGCTTGATCTCATGAAAAAGTTCACTGGAGGACAAGAGATCATTAAG
ACTGGTATCACGAAGTCTGTGTCAAACTTTCTCTCCTTGCAATGTCTATTGAAGCATAGG
TCAAGATTGAAAGTTATTTTTAACAGTCCAGAGCTTGCTGCCAATTCTGCTTATACAAAC
AAATCGCAAAGTGTTAATTGTATCGCAATTCTGGATGACAATGACTTTTGGAGGACAGCT
GAAGAGTGTGTTGCTGTTTCTGAACCCTTTCTCAAAGTTATGAGAGAAGTTTCTGGAGGA
AAGCCAGCTGTGGGCACTATATATGAACTACTGACCAGAGCAAAGGAATCTATAAGGACA
TACTATATTATGGATGAAATAAAGTGCAAGACATTTTTAGATATAGTGGATAAGAACTGG
AAGAACAACCTCCACTCTCCTCTGCATTCAGCAGCTGCCTTTTTGAATCCTGGCATCCAA
TATAACCGAGAAGTCAAGTTTCTTGGGTCAATAAAAGAAGATTTTTTCAGAGTGCTGGAG
AAGCTGCTACCAACTCCCGAACTGAGGCGAGATATCACTACTCAAATCCTTTTATATACA
CGTGCATCTGGGATGTTTGGTTGTAATCTGGCGAAGGAAGCAATTGATACTGTTCCTCCA
GGTATCTGGTGGGAACAGTATGGTGATGCTGCTCCTACATTACAAAGAGTTGCTATTAAA
ATACTTAGCCAGGTGTGCAGTACGTTCACTTTTGAGCGACATTGGAGCACATTTCAGCAA
ATCCATTCTGAGAAGCGCAATAAGATTGATAAGGAAACACTTTTAGACCTTGTTTACATA
AATTATAATCTGAAGCTAGCACGGTATTTGGTTTCTAAACCTCCTGAGGAAGATCCTCTC
CAACTTGATGACATAGATATGACATCTGAGTGGGTGGAAGAGGCAGAAAATCCTAGTCCA
ACTCAGTGGCTTGATAGATTTGGTTCAGGTCTGGATGGGAATGACTTGAACACACGACAA
TTTACTGCTGCAATATTTGGTCCCGGTGACAACATATTTGGTTTGTGA