Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023485
CDS Infomation

pacid=37459030 polypeptide=PGSC0003DMP400016012 locus=PGSC0003DMG400009094 ID=PGSC0003DMT400023485.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCGGCTTCGTTCTTCTCTAAAAACTTCAGCCGAAGAATTCCTTTCTTCAACA
GCAAAACTAGGGTTTAAATCCATTAAACCATCTCTCAAAACCCTAATTCACACTCTCAGT
CCTTCTTCAGATCTCACCACTACGCTTCCTCTCGCCCTCCACCACTCCATTTCACAATCC
ATCAGGAAATACAAAACCCTAACTGATTCCGACTCAACCGATGTCGTTTTATCTCCTCAA
ACACCGCCGACGAAGAGGGTCCGTAGATCTGCCCGGAACAAGAAGAGTGAAGAAGAAAAG
GATGATGCAAAACAATTAATCGTTGAGGGTATTCGTATATATGTTTATATTTCGTTTCTC
TGTGTTTCTCATCCGAGAAAGGCGTTTAGGGATTCTGATTTATTGCCGGCGGTTAGGGCG
TTACATGATTGTTTGATTTTATTTGAGTCTGATTCTGTTTTGTTATCTGAAATTGCTAAT
TTATGTGAGGAGTGGTGGAAGGACGGTTTGTATGGGAAAGAAACTCTAATTTCTCAGGCA
TTGCCGTTTCTGTTGTCGAGAGCTTTGACATTGAAGAAGAAAGTGGATGTGCATAGGGTT
TATATGTTAAGAGAGGCATTTACGTTGTTGGATTTTGAGGATGAGAGTATTGAGGATTTG
AAGCATTTGATTATGCGTTGTGTGATTTCTCCTCTGTTTTTGAAGACAGAGGATGGGAGG
AAATTTATTGCATTTACATTTGGTTTGAGCGTGCAGCTTCTGAAAGAGGCATTGGCTATG
CTTAAATCACAGATTCCATTCGGGCGTAAGTCTATCTTGGAGGCATTTGGGGAGATTGTT
TTTCGGGCATGGAAGGTATCCGAAGGGCTGTCTAAGGATGAGATTGAGAATAGCTTCTTG
CAGGGGATGATAGATAGCTGTGTACATGCAAGTTCAGCGGTACTTGCTGTGTCCATTAGA
AGGGTTTTAGGGGGTTTTATTAATCAGAGAACCACAGAGGGGGTTGAGAAGCTCATTTTT
CGTCTTGCTGAGCCTGTTGTTTTCCGCTCCTTGCAGGTTGCAAACTCAAATGTCCGACAA
AATTCATTGCACTTATTTCTAGATCTATTCCCTCTTGAAGATCCTGATGCGACAAAAGAG
GCGAAAGACACACTCCTTGATAAACAGTTCTTTCTTCTGGATAAATTACTTGTGGATGAG
TGTCCTGATGTGCGGGTTGTAGCAGTTGAAGGTTGTTGCCGCATTCTTCGTTTGTTTTGG
GAAGTTATCCCTTCACCAACAATCACAAAAACTCTAACCAAAATCTTTGAACATATGATA
CATGACTCATGCCCTGAGGTCAGGTTGTCAACAGTAAATGCTGTGATATACCTTCTTGGA
AACCCCCATTCTCACGAGATCCTCAAAGTACTATTACCAAGAATGGGTCATTTGATTCAT
GATATTTCTCCTCCAGTTCGTGCTGCAGTTGTAGATCTCCTTCTCACTTTAACAGATTTA
AGAAAATTTCAGTTTCACAAGGTTGTGCATATAGACCTGTTGTTGTCTACACTTGCAAAT
GATCAACCAATGATTGGTCAGAAAATCACTAAGCTTCTCCTTCCTTCATACTTCCCCTCA
AAAGTAAACCTGAAAGAAGCATGCAATCGCTGTGTCACACTTATAAAAAGGTCTCCTTTG
GCTGGTGCAAGGTTCTGTGAATTTGCCGTATCAGAAGGAACCTCGCTGCAGTCATGGATG
GAACTCTTGAAAAACCTCATCAGTTTGATTGTATCATCTTGCAAATTGGAGGCGGAGCAG
ATTGATGGTTCAATTATTGCAGCTTCCCACCTTTGTATCTATCTTGTACATGATGGGTCT
TATCAGACTAAACTTAAAGAGGAATTGTCTGGTGAAAGACTGAAGCACTTGTTTGCTGCT
GCAACCTCAGCATGTGCCCAGGCCTCTGTCTGTAACATTATTTCAAGTGTCTGTCCAGAT
GCAGTGGATGGCCTTTTCAATGACTGCATGACCTTGGTAACTAATTGTGGAGATTTATCC
AATTCTTTAGAAAAGCAAGCTGAGGTGAGGTCTGTCCACAAAATGATGCTATCTTGCAAT
TGGTTGGATGAGATGTTTGAAAATCTAGCTAGGCATCTGCAAAGAACAGCCTCCCAGTGC
CACGAGATATTTGGGACAGAACTGGTAAACTTTAGTGTTCCATCAACTAAACGGGTAAAG
AGTAAGTCCTCCGTCAAGCTCTCCTCTAAATCAAAGAATCTGAGGGAGAAAAAGATGTCC
AATAAGGTTAAATGTAGCTTCAAGGAAGAGTACGAAATCGCTGTAGGAGTGGCTTGGCAG
ATTAAGGACCTCCTTTTGTCTGAAAATACAAGGACTGCTATTCTACGGAGTGGAAGCTTA
GAAACTATACTCCTTTCTTTGAAGGCCATCTCTGAAGTTAGCATTTTACAATGTACACAA
CGTGAATATATGAGTGTGTCCCCAATTTTGGCATACACAGCTCTTGCTCTTCACAGATCT
TTGCAGGACAACAACTTAGGTGGAGACAAAAATGTCAACAAGAGGAAGCGTAGAATGGAA
TCTGCAAATGAAACATCAGAGGAAACTGCATTGGAAATGACAATTCATCATCTTCTTCGC
TGCACAAATAAGCTAATCAGAGTACCATCTAGTGAAATATCTGACCTCACCAGTAATGGA
TCTGATCTTACTAAACAACAGAGGATATTAAATGTGGTCAAGATGCTAACCGCAGTGCTG
AAGTTCATTGCTGATGCTCATACAATGGATCTTGTACATAAAAGCCAGGAGGAATGCCTA
TCCTTTACTCTGCAAAACATAAAATTTATTATCTCAAATTTGAGGAGAAGTTCTGATGAG
GAGCTGCAATTTACAGAAGACATGTTGAAAGAGATATATCTCTGTCTGAAGAGTTCCTTC
ACATATGTAGCCAAGTTGATGAATGTAGTGCTCAAGAATTTCTCTGAGGTATCACAACCT
TTATGGGGAGCTTTTGACATTGCCAATGAATTGTTAAACCTTTATGTTTCCATTGAAGAG
CACTTGGGCTATGGATATGCAGTTCGTCTTTTTCCTGCAGTCAAACCATGGGTTCCTGAT
TTAATTCTGGCATTAGGATCTTTAGACCTGATGAAGAAGATTCCAGGAGGCAGAACTAGT
TCCTTTAATCCAAAAGATGATCTTCCATTGTGGGTATCCACATTAGCCAGGACTGAGCTG
GCTGAACAGCAAGATACAAATTCTGATGAGGAGCCTGATAGAATTTCTAAGACGGGGGAC
TTCAAAACATTCAAGAAACTTGTGAATTTAATGGTTCAGCTGTTGAGAGCTAACTATAAT
GTGCTGGATGCAGTTGGGCTGACTATATTGAATAATGTGCTGGTTGGGCTGAAAAGAAAG
AGTTTTGATTTTGTGTTTGGGCTCCTGCATTTTGTGTGTGTTAAGCTAGTCAGACATGAT
GAAAGAGAGTGGAAGGAACTTACATTAATGTTGACATCCCTCCAGCAGATCTACCCTCAA
CTGGAGTTAGAAGAAGACTCATGTAATGATGAGGATGCAAGACAGGAGTTGCATAGTGCA
AGAGCATTGGTTGAACCTGTTTGGAAATGTTATTTATGTGACGATGCGAGGAATTCTTTT
GAAGAAGAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400016012
PEP Infomation

pacid=37459030 transcript=PGSC0003DMT400023485 locus=PGSC0003DMG400009094 ID=PGSC0003DMT400023485.v4.03 annot-version=v4.03
Sequence

MEKRLRSSLKTSAEEFLSSTAKLGFKSIKPSLKTLIHTLSPSSDLTTTLPLALHHSISQS
IRKYKTLTDSDSTDVVLSPQTPPTKRVRRSARNKKSEEEKDDAKQLIVEGIRIYVYISFL
CVSHPRKAFRDSDLLPAVRALHDCLILFESDSVLLSEIANLCEEWWKDGLYGKETLISQA
LPFLLSRALTLKKKVDVHRVYMLREAFTLLDFEDESIEDLKHLIMRCVISPLFLKTEDGR
KFIAFTFGLSVQLLKEALAMLKSQIPFGRKSILEAFGEIVFRAWKVSEGLSKDEIENSFL
QGMIDSCVHASSAVLAVSIRRVLGGFINQRTTEGVEKLIFRLAEPVVFRSLQVANSNVRQ
NSLHLFLDLFPLEDPDATKEAKDTLLDKQFFLLDKLLVDECPDVRVVAVEGCCRILRLFW
EVIPSPTITKTLTKIFEHMIHDSCPEVRLSTVNAVIYLLGNPHSHEILKVLLPRMGHLIH
DISPPVRAAVVDLLLTLTDLRKFQFHKVVHIDLLLSTLANDQPMIGQKITKLLLPSYFPS
KVNLKEACNRCVTLIKRSPLAGARFCEFAVSEGTSLQSWMELLKNLISLIVSSCKLEAEQ
IDGSIIAASHLCIYLVHDGSYQTKLKEELSGERLKHLFAAATSACAQASVCNIISSVCPD
AVDGLFNDCMTLVTNCGDLSNSLEKQAEVRSVHKMMLSCNWLDEMFENLARHLQRTASQC
HEIFGTELVNFSVPSTKRVKSKSSVKLSSKSKNLREKKMSNKVKCSFKEEYEIAVGVAWQ
IKDLLLSENTRTAILRSGSLETILLSLKAISEVSILQCTQREYMSVSPILAYTALALHRS
LQDNNLGGDKNVNKRKRRMESANETSEETALEMTIHHLLRCTNKLIRVPSSEISDLTSNG
SDLTKQQRILNVVKMLTAVLKFIADAHTMDLVHKSQEECLSFTLQNIKFIISNLRRSSDE
ELQFTEDMLKEIYLCLKSSFTYVAKLMNVVLKNFSEVSQPLWGAFDIANELLNLYVSIEE
HLGYGYAVRLFPAVKPWVPDLILALGSLDLMKKIPGGRTSSFNPKDDLPLWVSTLARTEL
AEQQDTNSDEEPDRISKTGDFKTFKKLVNLMVQLLRANYNVLDAVGLTILNNVLVGLKRK
SFDFVFGLLHFVCVKLVRHDEREWKELTLMLTSLQQIYPQLELEEDSCNDEDARQELHSA
RALVEPVWKCYLCDDARNSFEEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400023485
Transcript Infomation

pacid=37459030 locus=PGSC0003DMG400009094 ID=PGSC0003DMT400023485.v4.03 annot-version=v4.03
Sequence

ATGGAGAAGCGGCTTCGTTCTTCTCTAAAAACTTCAGCCGAAGAATTCCTTTCTTCAACA
GCAAAACTAGGGTTTAAATCCATTAAACCATCTCTCAAAACCCTAATTCACACTCTCAGT
CCTTCTTCAGATCTCACCACTACGCTTCCTCTCGCCCTCCACCACTCCATTTCACAATCC
ATCAGGAAATACAAAACCCTAACTGATTCCGACTCAACCGATGTCGTTTTATCTCCTCAA
ACACCGCCGACGAAGAGGGTCCGTAGATCTGCCCGGAACAAGAAGAGTGAAGAAGAAAAG
GATGATGCAAAACAATTAATCGTTGAGGGTATTCGTATATATGTTTATATTTCGTTTCTC
TGTGTTTCTCATCCGAGAAAGGCGTTTAGGGATTCTGATTTATTGCCGGCGGTTAGGGCG
TTACATGATTGTTTGATTTTATTTGAGTCTGATTCTGTTTTGTTATCTGAAATTGCTAAT
TTATGTGAGGAGTGGTGGAAGGACGGTTTGTATGGGAAAGAAACTCTAATTTCTCAGGCA
TTGCCGTTTCTGTTGTCGAGAGCTTTGACATTGAAGAAGAAAGTGGATGTGCATAGGGTT
TATATGTTAAGAGAGGCATTTACGTTGTTGGATTTTGAGGATGAGAGTATTGAGGATTTG
AAGCATTTGATTATGCGTTGTGTGATTTCTCCTCTGTTTTTGAAGACAGAGGATGGGAGG
AAATTTATTGCATTTACATTTGGTTTGAGCGTGCAGCTTCTGAAAGAGGCATTGGCTATG
CTTAAATCACAGATTCCATTCGGGCGTAAGTCTATCTTGGAGGCATTTGGGGAGATTGTT
TTTCGGGCATGGAAGGTATCCGAAGGGCTGTCTAAGGATGAGATTGAGAATAGCTTCTTG
CAGGGGATGATAGATAGCTGTGTACATGCAAGTTCAGCGGTACTTGCTGTGTCCATTAGA
AGGGTTTTAGGGGGTTTTATTAATCAGAGAACCACAGAGGGGGTTGAGAAGCTCATTTTT
CGTCTTGCTGAGCCTGTTGTTTTCCGCTCCTTGCAGGTTGCAAACTCAAATGTCCGACAA
AATTCATTGCACTTATTTCTAGATCTATTCCCTCTTGAAGATCCTGATGCGACAAAAGAG
GCGAAAGACACACTCCTTGATAAACAGTTCTTTCTTCTGGATAAATTACTTGTGGATGAG
TGTCCTGATGTGCGGGTTGTAGCAGTTGAAGGTTGTTGCCGCATTCTTCGTTTGTTTTGG
GAAGTTATCCCTTCACCAACAATCACAAAAACTCTAACCAAAATCTTTGAACATATGATA
CATGACTCATGCCCTGAGGTCAGGTTGTCAACAGTAAATGCTGTGATATACCTTCTTGGA
AACCCCCATTCTCACGAGATCCTCAAAGTACTATTACCAAGAATGGGTCATTTGATTCAT
GATATTTCTCCTCCAGTTCGTGCTGCAGTTGTAGATCTCCTTCTCACTTTAACAGATTTA
AGAAAATTTCAGTTTCACAAGGTTGTGCATATAGACCTGTTGTTGTCTACACTTGCAAAT
GATCAACCAATGATTGGTCAGAAAATCACTAAGCTTCTCCTTCCTTCATACTTCCCCTCA
AAAGTAAACCTGAAAGAAGCATGCAATCGCTGTGTCACACTTATAAAAAGGTCTCCTTTG
GCTGGTGCAAGGTTCTGTGAATTTGCCGTATCAGAAGGAACCTCGCTGCAGTCATGGATG
GAACTCTTGAAAAACCTCATCAGTTTGATTGTATCATCTTGCAAATTGGAGGCGGAGCAG
ATTGATGGTTCAATTATTGCAGCTTCCCACCTTTGTATCTATCTTGTACATGATGGGTCT
TATCAGACTAAACTTAAAGAGGAATTGTCTGGTGAAAGACTGAAGCACTTGTTTGCTGCT
GCAACCTCAGCATGTGCCCAGGCCTCTGTCTGTAACATTATTTCAAGTGTCTGTCCAGAT
GCAGTGGATGGCCTTTTCAATGACTGCATGACCTTGGTAACTAATTGTGGAGATTTATCC
AATTCTTTAGAAAAGCAAGCTGAGGTGAGGTCTGTCCACAAAATGATGCTATCTTGCAAT
TGGTTGGATGAGATGTTTGAAAATCTAGCTAGGCATCTGCAAAGAACAGCCTCCCAGTGC
CACGAGATATTTGGGACAGAACTGGTAAACTTTAGTGTTCCATCAACTAAACGGGTAAAG
AGTAAGTCCTCCGTCAAGCTCTCCTCTAAATCAAAGAATCTGAGGGAGAAAAAGATGTCC
AATAAGGTTAAATGTAGCTTCAAGGAAGAGTACGAAATCGCTGTAGGAGTGGCTTGGCAG
ATTAAGGACCTCCTTTTGTCTGAAAATACAAGGACTGCTATTCTACGGAGTGGAAGCTTA
GAAACTATACTCCTTTCTTTGAAGGCCATCTCTGAAGTTAGCATTTTACAATGTACACAA
CGTGAATATATGAGTGTGTCCCCAATTTTGGCATACACAGCTCTTGCTCTTCACAGATCT
TTGCAGGACAACAACTTAGGTGGAGACAAAAATGTCAACAAGAGGAAGCGTAGAATGGAA
TCTGCAAATGAAACATCAGAGGAAACTGCATTGGAAATGACAATTCATCATCTTCTTCGC
TGCACAAATAAGCTAATCAGAGTACCATCTAGTGAAATATCTGACCTCACCAGTAATGGA
TCTGATCTTACTAAACAACAGAGGATATTAAATGTGGTCAAGATGCTAACCGCAGTGCTG
AAGTTCATTGCTGATGCTCATACAATGGATCTTGTACATAAAAGCCAGGAGGAATGCCTA
TCCTTTACTCTGCAAAACATAAAATTTATTATCTCAAATTTGAGGAGAAGTTCTGATGAG
GAGCTGCAATTTACAGAAGACATGTTGAAAGAGATATATCTCTGTCTGAAGAGTTCCTTC
ACATATGTAGCCAAGTTGATGAATGTAGTGCTCAAGAATTTCTCTGAGGTATCACAACCT
TTATGGGGAGCTTTTGACATTGCCAATGAATTGTTAAACCTTTATGTTTCCATTGAAGAG
CACTTGGGCTATGGATATGCAGTTCGTCTTTTTCCTGCAGTCAAACCATGGGTTCCTGAT
TTAATTCTGGCATTAGGATCTTTAGACCTGATGAAGAAGATTCCAGGAGGCAGAACTAGT
TCCTTTAATCCAAAAGATGATCTTCCATTGTGGGTATCCACATTAGCCAGGACTGAGCTG
GCTGAACAGCAAGATACAAATTCTGATGAGGAGCCTGATAGAATTTCTAAGACGGGGGAC
TTCAAAACATTCAAGAAACTTGTGAATTTAATGGTTCAGCTGTTGAGAGCTAACTATAAT
GTGCTGGATGCAGTTGGGCTGACTATATTGAATAATGTGCTGGTTGGGCTGAAAAGAAAG
AGTTTTGATTTTGTGTTTGGGCTCCTGCATTTTGTGTGTGTTAAGCTAGTCAGACATGAT
GAAAGAGAGTGGAAGGAACTTACATTAATGTTGACATCCCTCCAGCAGATCTACCCTCAA
CTGGAGTTAGAAGAAGACTCATGTAATGATGAGGATGCAAGACAGGAGTTGCATAGTGCA
AGAGCATTGGTTGAACCTGTTTGGAAATGTTATTTATGTGACGATGCGAGGAATTCTTTT
GAAGAAGAGTAG