Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023459
CDS Infomation

pacid=37460406 polypeptide=PGSC0003DMP400015994 locus=PGSC0003DMG400009082 ID=PGSC0003DMT400023459.v4.03 annot-version=v4.03
Sequence

ATGGAAACTCACATGTCTCATCATCAGTATGAAAGACGACCCATATACAAGTCCAAAGCT
CCTGCTTCCAAATGGTTTAAGGAATGGGTCCCACAAGATGTTGTTGCAACTGGTGGGAAG
TGCTACGTCTTAAAGTGGGTGAATGAGGCCACATTAAAAGCTCTGAAGGAGAAGCCAAAA
GAGGCAGGAGTACCTGTGTCAGAACCAGAGCCAACTACTGAAGTTCTTTTTCTTTGTAGC
TATGAAGGTTGTGGAAAGACATTTATTGATGCTGGGGCCTTGAGGAAGCATTCTCACATC
CATGGGGAGAGGCAGTATGTATGTCACTATGAGGGTTGTGGAAAGAAATTTTTGGATAGT
TCCAAGCTAAAACGACACTTTCTTATTCACACCGGAGAAAGAGACTATGTATGTCCACAT
GAAGGCTGTGGTAAGGCATTCTCACTGGATTTTAACTTAAGATCACACATGAAAACACAC
TCCCAGGAGAACTATCATATCTGCCCGTATCCAGAATGTGGAAAGCGATATGCACATGAG
TACAAACTTAAAAATCATATTTCATCTACTCACCAGAAGAACAACACACCAGATGCACAT
GCACATGCACATGCACCAAAGTATACTCCGCCTGTGGAGAAGCCAGTGAAGACTCCGAAA
TCTTCTTCAGCAGCTTATGGCTCATCATCATCTGACCGCCCTTACAGCTGTCCATATGAA
GGTTGTGACAAATCTTACATCCATGAATACAAGCTGAATCTTCATTTAAGGAACATGCAC
CCAGGTCATTTCCCAGAGGAGAACGCGAGAAATGTTCAATCCACTGCTGACAATGAGATG
GACGAAGGCAGTGATCAGGATGCATATGCTGCAAGACGTGGAAACGGAAGAATTCAGAAA
CAGAGCAGACCAAAACCAAGCTTAAAGCAACCACCTTTAAAAGTTGCACGCAAAAGCTCA
TCTAGTGCTGCTCAAGTCAATCTAAGTATATCGAAGAAACCTTGGCCGATTAAAGAAGAG
AACTTCAATGAAGAAGATAGTGAAGAAACAGAAGAGGAGCGGGATGATGTTGGGGATGGA
TGGAGGTATGGTGAAAACGATGACGACGATGAAGAGACTGAAGAAGATGACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015994
PEP Infomation

pacid=37460406 transcript=PGSC0003DMT400023459 locus=PGSC0003DMG400009082 ID=PGSC0003DMT400023459.v4.03 annot-version=v4.03
Sequence

METHMSHHQYERRPIYKSKAPASKWFKEWVPQDVVATGGKCYVLKWVNEATLKALKEKPK
EAGVPVSEPEPTTEVLFLCSYEGCGKTFIDAGALRKHSHIHGERQYVCHYEGCGKKFLDS
SKLKRHFLIHTGERDYVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPECGKRYAHE
YKLKNHISSTHQKNNTPDAHAHAHAPKYTPPVEKPVKTPKSSSAAYGSSSSDRPYSCPYE
GCDKSYIHEYKLNLHLRNMHPGHFPEENARNVQSTADNEMDEGSDQDAYAARRGNGRIQK
QSRPKPSLKQPPLKVARKSSSSAAQVNLSISKKPWPIKEENFNEEDSEETEEERDDVGDG
WRYGENDDDDEETEEDD*

Transcript Sequence

Transcript ID

PGSC0003DMT400023459
Transcript Infomation

pacid=37460406 locus=PGSC0003DMG400009082 ID=PGSC0003DMT400023459.v4.03 annot-version=v4.03
Sequence

ATGGAAACTCACATGTCTCATCATCAGTATGAAAGACGACCCATATACAAGTCCAAAGCT
CCTGCTTCCAAATGGTTTAAGGAATGGGTCCCACAAGATGTTGTTGCAACTGGTGGGAAG
TGCTACGTCTTAAAGTGGGTGAATGAGGCCACATTAAAAGCTCTGAAGGAGAAGCCAAAA
GAGGCAGGAGTACCTGTGTCAGAACCAGAGCCAACTACTGAAGTTCTTTTTCTTTGTAGC
TATGAAGGTTGTGGAAAGACATTTATTGATGCTGGGGCCTTGAGGAAGCATTCTCACATC
CATGGGGAGAGGCAGTATGTATGTCACTATGAGGGTTGTGGAAAGAAATTTTTGGATAGT
TCCAAGCTAAAACGACACTTTCTTATTCACACCGGAGAAAGAGACTATGTATGTCCACAT
GAAGGCTGTGGTAAGGCATTCTCACTGGATTTTAACTTAAGATCACACATGAAAACACAC
TCCCAGGAGAACTATCATATCTGCCCGTATCCAGAATGTGGAAAGCGATATGCACATGAG
TACAAACTTAAAAATCATATTTCATCTACTCACCAGAAGAACAACACACCAGATGCACAT
GCACATGCACATGCACCAAAGTATACTCCGCCTGTGGAGAAGCCAGTGAAGACTCCGAAA
TCTTCTTCAGCAGCTTATGGCTCATCATCATCTGACCGCCCTTACAGCTGTCCATATGAA
GGTTGTGACAAATCTTACATCCATGAATACAAGCTGAATCTTCATTTAAGGAACATGCAC
CCAGGTCATTTCCCAGAGGAGAACGCGAGAAATGTTCAATCCACTGCTGACAATGAGATG
GACGAAGGCAGTGATCAGGATGCATATGCTGCAAGACGTGGAAACGGAAGAATTCAGAAA
CAGAGCAGACCAAAACCAAGCTTAAAGCAACCACCTTTAAAAGTTGCACGCAAAAGCTCA
TCTAGTGCTGCTCAAGTCAATCTAAGTATATCGAAGAAACCTTGGCCGATTAAAGAAGAG
AACTTCAATGAAGAAGATAGTGAAGAAACAGAAGAGGAGCGGGATGATGTTGGGGATGGA
TGGAGGTATGGTGAAAACGATGACGACGATGAAGAGACTGAAGAAGATGACTAG