Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023399
CDS Infomation

pacid=37458993 polypeptide=PGSC0003DMP400015950 locus=PGSC0003DMG400009061 ID=PGSC0003DMT400023399.v4.03 annot-version=v4.03
Sequence

ATGTCAGCTTCACCTGCAAGGCCTTGTGCTCCAGTTATTAAACAATGTAAGCTACCAATT
TTCGCTCGCAGTGATGTTTGGACAACTCCAGTTGGAAATAGTTTCCAAGGGAGGCGAAAG
CTGTTATCATTAAGGGTTAATTTTTCGAAGAGATTGTCAATTAGGTGCGGTGTTTATGGG
GAAACGGAAAGTGCAGCTGGTTTTTCCGACGAGAGCAGTGCAATAAAAGATGACTTATTC
GTTGGGTATTTTCGAGAAGCTTGGCCTTATTTTCTTGCGCATAGAGGAAGCACTTTCGTT
GTTTTAATCTCAGCTGAAATTGTTGATAGTCCTCATTTGGATCATCTTCTCATGGATATC
TCGCTCCTTCATGGCCTGGGAATCAAGTTTGTTCTTGTACCTGGAACTCATGTCCAAATT
GATAGGTTTCTGGCTGAAAGAGGAAGTGAGCCCAAGTATGTAGGCCGCTACAGAGTAACA
GACCCTGATTCACTGATGGCTGCAATGGATGCAGCTGGGAGAATTCGTCTTATGATAGAG
GCAAAGTTGTCTCCTGGGCCATCATTGACTGGTGTCCGCCGGCATGGAGAAAATAGTCGC
TGGCATGATGGTGTTAGTGTTGCTAGTGGTAATTTTCTAGCAATGAAGAGAAGAGGAGTT
GTAGAAGGAATTGATTATGCAGCGACTGGTGAAGTAAAGAAGATAGACGTTTCTCGCATT
CGTGAGAGACTTGATCAGGATAGCATTGTGTTGTTAAGCAATCTTGGATATTCCAGCTCT
GGAGAAGTTTTGAACTGCAACACATATGAAGTTGCTACAGCTTGTGCCTTGGCTCTAGGA
GCAGAGAAACTGATTTGTATTATAGATGGTCCAATTCTGGATGAGTCTGGCCGTCTTATT
CGTTTCTTGACTCTTCAAGCTGCTGACATGCTGGTTCGCAAACGAGCAGAACAAAGTGAG
GCAGCAGCTAATTATGTAAAAGCTGTCAGTCAAGTGGACTTCAATTGTTTAGATCACAAT
GGTTCTAATGGATCAATCTCTTCCTACAATATGAATGGGTTTAGCCAAAAATACAGTGTT
TTTCAGAATGGTGTTGGTTTTGACAATGGGAATGGGCTTTGGTCTAGTGAGCAGGGTTTT
GCCATTGGGGGACAAGAGAGGTTAAGTCGACTAAATGGTTATCTTTCAGAGTTAGCTGCA
GCTGCTTTTGTGTGCAGAGGAGGTGTTCAAAGAGTTCACCTGCTGGATGGTACTATTGGT
GGAGTTTTACTAAAGGAATTGTTCCAAAGAGATGGAGTTGGGACAATGGTAGCTAGTGAT
CTTTACGAAGGAACACGAATGGCTAGGCTGTCAGATATTCCCGAGATCAAACAATTATTA
CAACCTCTAGAAGAGTCTGGAACATTGATCAAAAGGAGCGAGGAAGAGCTGGTGGAGGCA
CTGCATTCATTCATTGTTGTGGAGAGAGAAGGCCACATTATAGCTTGTGCTGCTCTCTTT
CCTTACTTTGAAGAAAAATGTGGAGAGGTTGCTGCTATTGCCGTTTCTCCTGATTGTCGT
GGCCAAGGACAAGGAGACAAATTACTTGACTACATTGAGAAGAAGGCATCCTCCCTTGGA
TTGCAAATGTTGTTTCTGCTTACAACTCGCACAGCTGATTGGTTTGTGAGGCGCGGCTTT
TCTGAATGTTCCATCGACCGCATACCAGCTCAAAAAAGGAAAAAGATCAATCTATCTCGT
AGGTCGAAGTATTACATGAAGAAGCTGCTACCTGATAGAAGTGGTATACGCTTTGACAAC
CCCTTTTCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400015950
PEP Infomation

pacid=37458993 transcript=PGSC0003DMT400023399 locus=PGSC0003DMG400009061 ID=PGSC0003DMT400023399.v4.03 annot-version=v4.03
Sequence

MSASPARPCAPVIKQCKLPIFARSDVWTTPVGNSFQGRRKLLSLRVNFSKRLSIRCGVYG
ETESAAGFSDESSAIKDDLFVGYFREAWPYFLAHRGSTFVVLISAEIVDSPHLDHLLMDI
SLLHGLGIKFVLVPGTHVQIDRFLAERGSEPKYVGRYRVTDPDSLMAAMDAAGRIRLMIE
AKLSPGPSLTGVRRHGENSRWHDGVSVASGNFLAMKRRGVVEGIDYAATGEVKKIDVSRI
RERLDQDSIVLLSNLGYSSSGEVLNCNTYEVATACALALGAEKLICIIDGPILDESGRLI
RFLTLQAADMLVRKRAEQSEAAANYVKAVSQVDFNCLDHNGSNGSISSYNMNGFSQKYSV
FQNGVGFDNGNGLWSSEQGFAIGGQERLSRLNGYLSELAAAAFVCRGGVQRVHLLDGTIG
GVLLKELFQRDGVGTMVASDLYEGTRMARLSDIPEIKQLLQPLEESGTLIKRSEEELVEA
LHSFIVVEREGHIIACAALFPYFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSLG
LQMLFLLTTRTADWFVRRGFSECSIDRIPAQKRKKINLSRRSKYYMKKLLPDRSGIRFDN
PFS*

Transcript Sequence

Transcript ID

PGSC0003DMT400023399
Transcript Infomation

pacid=37458993 locus=PGSC0003DMG400009061 ID=PGSC0003DMT400023399.v4.03 annot-version=v4.03
Sequence

ATGTCAGCTTCACCTGCAAGGCCTTGTGCTCCAGTTATTAAACAATGTAAGCTACCAATT
TTCGCTCGCAGTGATGTTTGGACAACTCCAGTTGGAAATAGTTTCCAAGGGAGGCGAAAG
CTGTTATCATTAAGGGTTAATTTTTCGAAGAGATTGTCAATTAGGTGCGGTGTTTATGGG
GAAACGGAAAGTGCAGCTGGTTTTTCCGACGAGAGCAGTGCAATAAAAGATGACTTATTC
GTTGGGTATTTTCGAGAAGCTTGGCCTTATTTTCTTGCGCATAGAGGAAGCACTTTCGTT
GTTTTAATCTCAGCTGAAATTGTTGATAGTCCTCATTTGGATCATCTTCTCATGGATATC
TCGCTCCTTCATGGCCTGGGAATCAAGTTTGTTCTTGTACCTGGAACTCATGTCCAAATT
GATAGGTTTCTGGCTGAAAGAGGAAGTGAGCCCAAGTATGTAGGCCGCTACAGAGTAACA
GACCCTGATTCACTGATGGCTGCAATGGATGCAGCTGGGAGAATTCGTCTTATGATAGAG
GCAAAGTTGTCTCCTGGGCCATCATTGACTGGTGTCCGCCGGCATGGAGAAAATAGTCGC
TGGCATGATGGTGTTAGTGTTGCTAGTGGTAATTTTCTAGCAATGAAGAGAAGAGGAGTT
GTAGAAGGAATTGATTATGCAGCGACTGGTGAAGTAAAGAAGATAGACGTTTCTCGCATT
CGTGAGAGACTTGATCAGGATAGCATTGTGTTGTTAAGCAATCTTGGATATTCCAGCTCT
GGAGAAGTTTTGAACTGCAACACATATGAAGTTGCTACAGCTTGTGCCTTGGCTCTAGGA
GCAGAGAAACTGATTTGTATTATAGATGGTCCAATTCTGGATGAGTCTGGCCGTCTTATT
CGTTTCTTGACTCTTCAAGCTGCTGACATGCTGGTTCGCAAACGAGCAGAACAAAGTGAG
GCAGCAGCTAATTATGTAAAAGCTGTCAGTCAAGTGGACTTCAATTGTTTAGATCACAAT
GGTTCTAATGGATCAATCTCTTCCTACAATATGAATGGGTTTAGCCAAAAATACAGTGTT
TTTCAGAATGGTGTTGGTTTTGACAATGGGAATGGGCTTTGGTCTAGTGAGCAGGGTTTT
GCCATTGGGGGACAAGAGAGGTTAAGTCGACTAAATGGTTATCTTTCAGAGTTAGCTGCA
GCTGCTTTTGTGTGCAGAGGAGGTGTTCAAAGAGTTCACCTGCTGGATGGTACTATTGGT
GGAGTTTTACTAAAGGAATTGTTCCAAAGAGATGGAGTTGGGACAATGGTAGCTAGTGAT
CTTTACGAAGGAACACGAATGGCTAGGCTGTCAGATATTCCCGAGATCAAACAATTATTA
CAACCTCTAGAAGAGTCTGGAACATTGATCAAAAGGAGCGAGGAAGAGCTGGTGGAGGCA
CTGCATTCATTCATTGTTGTGGAGAGAGAAGGCCACATTATAGCTTGTGCTGCTCTCTTT
CCTTACTTTGAAGAAAAATGTGGAGAGGTTGCTGCTATTGCCGTTTCTCCTGATTGTCGT
GGCCAAGGACAAGGAGACAAATTACTTGACTACATTGAGAAGAAGGCATCCTCCCTTGGA
TTGCAAATGTTGTTTCTGCTTACAACTCGCACAGCTGATTGGTTTGTGAGGCGCGGCTTT
TCTGAATGTTCCATCGACCGCATACCAGCTCAAAAAAGGAAAAAGATCAATCTATCTCGT
AGGTCGAAGTATTACATGAAGAAGCTGCTACCTGATAGAAGTGGTATACGCTTTGACAAC
CCCTTTTCATAA