Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023374
CDS Infomation

pacid=37441278 polypeptide=PGSC0003DMP400015933 locus=PGSC0003DMG400009052 ID=PGSC0003DMT400023374.v4.03 annot-version=v4.03
Sequence

ATGAGCAAGTTTGGTTTGAAGGTTGAGGAAGGAAAAGAAGGGAAAAATGGAGAGCCATCT
ATTGGTCCTGTTTATAGAAATCCAATAGCTAAAAATGGTTTTCCATCAGCTGATCCTGAT
TTGTCTACAGCTTGGCAACTCTTCAGATCAGCTGTTGAAAAATATCCAGGAAACAGAATG
CTGGGATGGCGTGATTTTAAGGATGGAAAGTGGGGTTCTTATAATTGGAAAACCTACAAA
GAAGCTTATGAAGAGACTTTGCAGACAGGTTCTGCATTACGGGCTCACGGAATTGAACCT
GGTGCTCGAATTGGAATTTATGGAGCCAATTGTCCTCAGTGGATAGTAGCAATGGAGGCT
TGCAGTGCCCACAGCTTGATATGTGTTCCTCTCTATGATACCCTCGGATCCGGCGCTGTA
GATTTTATTATTGAACATGCTGAGATCGATATCGTTTTTGTTCAAGATAAGAAAGTGAAA
GAACTTCTAAATGAAGAGTGCACACACGCTAAACGCCTGAAATTGATCGTGTGTTTCACT
TCGCTACAGCAGGAAGAGAAGGATAAGGCAGTTTCTATGGATATCAAGCCATACTCTTGG
AATGAATTTCTCAACATGGGTAAAGAGAATCCATCAGAGCCTTCTCCGCCGCAGCCATTA
GACATATGTACAATCATGTATACTAGTGGAACTAGCGGAGAACCTAAAGGTGTAATATTG
ACTCATGAAAATATGACAGCATCTGTAACAGGAGTTGATCATTTTATGGAAGAATTTGAA
GACAAGATGACAGTGGATGATGTGTACATATCTTTCCTACCACTTGCTCATATACTTGAT
CGGATGATTGAAGAATTCTTCTTTCATAGGGGTGCTTCTGTTGGCTACTTCCATGGGAAT
ATCAATGAGATACAAGAAGACATGATGGAGTTGAAGCCAACCTTTTTGGCTGGAGTACCT
CGAGTTTATGAAAAAGTGCATGAAGGTGTACTGAAAGCACTTGAAGAACTCAATCCCTTC
AGGAGGCACATGTTCCATGTGCTATATAACCTCAAGCTTAAATGGATGAATCTTGGGTAC
AAACAGAAGTATGCTTCACGGCTGGCTGATCTACTAGCTTTTAGAAAGGTTAAGAATAGG
CTAGGTGGCAGGATTCGCCTCATAGTCTCTGGTGGTGCTCCTTTAAGCAGTGAGGTGGAA
GAGTTCTTACGGGTTACCTCCTGTGGATTTGTCCTACAAGGTTACGGTTTGACAGAGACT
TGTGGTTTGGCCACCATTGGGCATCCAGATGAAATGTGCATGCTTGGAACTGTTGGTCCA
CCATTTGTCTTCACAGAAGTTCGTCTCGAGGAAGTTCCTGAAATGGGATATGATCCCCTA
GCAGACCCTCCCCGGGGAGAGATATGCGTGAGAGGGAGGACCACTTTTGCTGGATACTAC
AAAAATCCAGAGTTGACAAAAGAGGCTATCAAAGATGGATGGTTTCATACAGGTGACATC
GGAGAAATGATGCCTAATGGAGTTGTAAAAGTCATTGATCGAAAGAAAAATGTTATAAAG
CTATCACAAGGAGAATATGTTGCATTGGAATATCTGGAAAAGGTTTATGGTATTGCGCCC
ATCGTTGAAGATATATGGGTATATGGGGACAGCTTCAAGTCCATGCTGGTAGCAGTCGTG
GCGCCACATGAAGGGAACACGAAAAAATGGGCTGATAAAAATGGACACAAGGGTTCAATT
ACTGAACTTTGTTCCCTCCAAGACCTAAACCAATATGTTCTCCTTGAGCTGAAATCTGCT
GCAGAAAGGAACAAGCTAAGAGGTTTCGAGAACATCAAAGGAGTGATTCTGGAACCTCAA
CCTTTTGAGTTTGACAAGGAGTTGGTAACAGCAACAATGAAAAAGAGAAGGGAGAGATTG
CTTAAGCGTTACAAGGTGGAGATTGATGACCTTTACAAAAGGCTTAATGCAGCAGCTAAA
CGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015933
PEP Infomation

pacid=37441278 transcript=PGSC0003DMT400023374 locus=PGSC0003DMG400009052 ID=PGSC0003DMT400023374.v4.03 annot-version=v4.03
Sequence

MSKFGLKVEEGKEGKNGEPSIGPVYRNPIAKNGFPSADPDLSTAWQLFRSAVEKYPGNRM
LGWRDFKDGKWGSYNWKTYKEAYEETLQTGSALRAHGIEPGARIGIYGANCPQWIVAMEA
CSAHSLICVPLYDTLGSGAVDFIIEHAEIDIVFVQDKKVKELLNEECTHAKRLKLIVCFT
SLQQEEKDKAVSMDIKPYSWNEFLNMGKENPSEPSPPQPLDICTIMYTSGTSGEPKGVIL
THENMTASVTGVDHFMEEFEDKMTVDDVYISFLPLAHILDRMIEEFFFHRGASVGYFHGN
INEIQEDMMELKPTFLAGVPRVYEKVHEGVLKALEELNPFRRHMFHVLYNLKLKWMNLGY
KQKYASRLADLLAFRKVKNRLGGRIRLIVSGGAPLSSEVEEFLRVTSCGFVLQGYGLTET
CGLATIGHPDEMCMLGTVGPPFVFTEVRLEEVPEMGYDPLADPPRGEICVRGRTTFAGYY
KNPELTKEAIKDGWFHTGDIGEMMPNGVVKVIDRKKNVIKLSQGEYVALEYLEKVYGIAP
IVEDIWVYGDSFKSMLVAVVAPHEGNTKKWADKNGHKGSITELCSLQDLNQYVLLELKSA
AERNKLRGFENIKGVILEPQPFEFDKELVTATMKKRRERLLKRYKVEIDDLYKRLNAAAK
R*

Transcript Sequence

Transcript ID

PGSC0003DMT400023374
Transcript Infomation

pacid=37441278 locus=PGSC0003DMG400009052 ID=PGSC0003DMT400023374.v4.03 annot-version=v4.03
Sequence

ATGAGCAAGTTTGGTTTGAAGGTTGAGGAAGGAAAAGAAGGGAAAAATGGAGAGCCATCT
ATTGGTCCTGTTTATAGAAATCCAATAGCTAAAAATGGTTTTCCATCAGCTGATCCTGAT
TTGTCTACAGCTTGGCAACTCTTCAGATCAGCTGTTGAAAAATATCCAGGAAACAGAATG
CTGGGATGGCGTGATTTTAAGGATGGAAAGTGGGGTTCTTATAATTGGAAAACCTACAAA
GAAGCTTATGAAGAGACTTTGCAGACAGGTTCTGCATTACGGGCTCACGGAATTGAACCT
GGTGCTCGAATTGGAATTTATGGAGCCAATTGTCCTCAGTGGATAGTAGCAATGGAGGCT
TGCAGTGCCCACAGCTTGATATGTGTTCCTCTCTATGATACCCTCGGATCCGGCGCTGTA
GATTTTATTATTGAACATGCTGAGATCGATATCGTTTTTGTTCAAGATAAGAAAGTGAAA
GAACTTCTAAATGAAGAGTGCACACACGCTAAACGCCTGAAATTGATCGTGTGTTTCACT
TCGCTACAGCAGGAAGAGAAGGATAAGGCAGTTTCTATGGATATCAAGCCATACTCTTGG
AATGAATTTCTCAACATGGGTAAAGAGAATCCATCAGAGCCTTCTCCGCCGCAGCCATTA
GACATATGTACAATCATGTATACTAGTGGAACTAGCGGAGAACCTAAAGGTGTAATATTG
ACTCATGAAAATATGACAGCATCTGTAACAGGAGTTGATCATTTTATGGAAGAATTTGAA
GACAAGATGACAGTGGATGATGTGTACATATCTTTCCTACCACTTGCTCATATACTTGAT
CGGATGATTGAAGAATTCTTCTTTCATAGGGGTGCTTCTGTTGGCTACTTCCATGGGAAT
ATCAATGAGATACAAGAAGACATGATGGAGTTGAAGCCAACCTTTTTGGCTGGAGTACCT
CGAGTTTATGAAAAAGTGCATGAAGGTGTACTGAAAGCACTTGAAGAACTCAATCCCTTC
AGGAGGCACATGTTCCATGTGCTATATAACCTCAAGCTTAAATGGATGAATCTTGGGTAC
AAACAGAAGTATGCTTCACGGCTGGCTGATCTACTAGCTTTTAGAAAGGTTAAGAATAGG
CTAGGTGGCAGGATTCGCCTCATAGTCTCTGGTGGTGCTCCTTTAAGCAGTGAGGTGGAA
GAGTTCTTACGGGTTACCTCCTGTGGATTTGTCCTACAAGGTTACGGTTTGACAGAGACT
TGTGGTTTGGCCACCATTGGGCATCCAGATGAAATGTGCATGCTTGGAACTGTTGGTCCA
CCATTTGTCTTCACAGAAGTTCGTCTCGAGGAAGTTCCTGAAATGGGATATGATCCCCTA
GCAGACCCTCCCCGGGGAGAGATATGCGTGAGAGGGAGGACCACTTTTGCTGGATACTAC
AAAAATCCAGAGTTGACAAAAGAGGCTATCAAAGATGGATGGTTTCATACAGGTGACATC
GGAGAAATGATGCCTAATGGAGTTGTAAAAGTCATTGATCGAAAGAAAAATGTTATAAAG
CTATCACAAGGAGAATATGTTGCATTGGAATATCTGGAAAAGGTTTATGGTATTGCGCCC
ATCGTTGAAGATATATGGGTATATGGGGACAGCTTCAAGTCCATGCTGGTAGCAGTCGTG
GCGCCACATGAAGGGAACACGAAAAAATGGGCTGATAAAAATGGACACAAGGGTTCAATT
ACTGAACTTTGTTCCCTCCAAGACCTAAACCAATATGTTCTCCTTGAGCTGAAATCTGCT
GCAGAAAGGAACAAGCTAAGAGGTTTCGAGAACATCAAAGGAGTGATTCTGGAACCTCAA
CCTTTTGAGTTTGACAAGGAGTTGGTAACAGCAACAATGAAAAAGAGAAGGGAGAGATTG
CTTAAGCGTTACAAGGTGGAGATTGATGACCTTTACAAAAGGCTTAATGCAGCAGCTAAA
CGCTAA