Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023354
CDS Infomation

pacid=37435489 polypeptide=PGSC0003DMP400015922 locus=PGSC0003DMG400009049 ID=PGSC0003DMT400023354.v4.03 annot-version=v4.03
Sequence

ATGTTAGGAAGAGTTTCATCACTTGTAACGATCTTGATCTTCGCTCAAACTGGAATTCTA
AATTCTCACCATGAAGCAGCTCACTGGAGTTGCGATTCCAACACCGATACCCATGTTCAA
GCTCACTTCAACCCAGGAAGAATAACCCTCGATGGACAAGTTGATGATTGGAAAGAGATT
GATGGTTCTGCATTTTCTGTTTTACCTGCTTTAGACCCAGATGCAGATAAGGCATACAAT
GGTGGGAAAATGGCCGTCAAGGCGTCACATGATGGCAAGGATGTTTTCTTCATGTTGCAA
GTCGACGGGGATTATACATATTCTGAAGGATACAGTAACAAGACTGCATCAGTTGCTTTT
ATGTTCCAAATTGGTGAAAATGCATCTTATCACAGAATGGGAGGGTGTGAAGAAGAACCT
GATACTTGCACGAGCAAGTCATGCAAGGGCCATGAAGTTGACCTTATGCATTTCTCAATA
GGAACGGCAATTCCTGGAAGACTCTATGGAGGGAACCTGCTAGATAACAGTGAGGGAAAT
GGGGGTGACAGGTTTGGTCATTTGGTTGATCTGTATTGTTGGAACCCACACTGCCGTTAT
TTGGATGGCTATGGTCCATCAGTAAATGATACTAGTGCACAGAATGATTGGAAAGGAACA
TGGTGGCACAGTAGCTTGACTCACTCAGGTTTTATTAAGGATGACAGCCCATATTCGTCC
AGCAACCAATCCGGTACATATTATTTTGAATTTTCCAGGCCGCTGAGAACAATGGATCAC
CTTCAACAGGATGCTCAGTTCACAATTGGCAAAACAAGTAAGATGTCTGTGGCATTTTGG
TACCCCATGGATGGAAAACCGTGGCACGGGTCTGGTCATTTTTCAATTAACTGCGATTGG
ATACTGTTGGATATCTTGCCAGATAGTTCTGAGCTCACCAAGGTGCCACAGAGAAGTTCT
TGGGATGCTGCTACAGCATTCTCCCTTCTCTTTTCAGTAGTGGCTTTTTGTATATCCATC
TTTGTTGGGCATAGAGTCTCGAGAACCAAGAACATCCCTTTTACACCCATGAGCAATCTT
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400015922
PEP Infomation

pacid=37435489 transcript=PGSC0003DMT400023354 locus=PGSC0003DMG400009049 ID=PGSC0003DMT400023354.v4.03 annot-version=v4.03
Sequence

MLGRVSSLVTILIFAQTGILNSHHEAAHWSCDSNTDTHVQAHFNPGRITLDGQVDDWKEI
DGSAFSVLPALDPDADKAYNGGKMAVKASHDGKDVFFMLQVDGDYTYSEGYSNKTASVAF
MFQIGENASYHRMGGCEEEPDTCTSKSCKGHEVDLMHFSIGTAIPGRLYGGNLLDNSEGN
GGDRFGHLVDLYCWNPHCRYLDGYGPSVNDTSAQNDWKGTWWHSSLTHSGFIKDDSPYSS
SNQSGTYYFEFSRPLRTMDHLQQDAQFTIGKTSKMSVAFWYPMDGKPWHGSGHFSINCDW
ILLDILPDSSELTKVPQRSSWDAATAFSLLFSVVAFCISIFVGHRVSRTKNIPFTPMSNL
*

Transcript Sequence

Transcript ID

PGSC0003DMT400023354
Transcript Infomation

pacid=37435489 locus=PGSC0003DMG400009049 ID=PGSC0003DMT400023354.v4.03 annot-version=v4.03
Sequence

ATGTTAGGAAGAGTTTCATCACTTGTAACGATCTTGATCTTCGCTCAAACTGGAATTCTA
AATTCTCACCATGAAGCAGCTCACTGGAGTTGCGATTCCAACACCGATACCCATGTTCAA
GCTCACTTCAACCCAGGAAGAATAACCCTCGATGGACAAGTTGATGATTGGAAAGAGATT
GATGGTTCTGCATTTTCTGTTTTACCTGCTTTAGACCCAGATGCAGATAAGGCATACAAT
GGTGGGAAAATGGCCGTCAAGGCGTCACATGATGGCAAGGATGTTTTCTTCATGTTGCAA
GTCGACGGGGATTATACATATTCTGAAGGATACAGTAACAAGACTGCATCAGTTGCTTTT
ATGTTCCAAATTGGTGAAAATGCATCTTATCACAGAATGGGAGGGTGTGAAGAAGAACCT
GATACTTGCACGAGCAAGTCATGCAAGGGCCATGAAGTTGACCTTATGCATTTCTCAATA
GGAACGGCAATTCCTGGAAGACTCTATGGAGGGAACCTGCTAGATAACAGTGAGGGAAAT
GGGGGTGACAGGTTTGGTCATTTGGTTGATCTGTATTGTTGGAACCCACACTGCCGTTAT
TTGGATGGCTATGGTCCATCAGTAAATGATACTAGTGCACAGAATGATTGGAAAGGAACA
TGGTGGCACAGTAGCTTGACTCACTCAGGTTTTATTAAGGATGACAGCCCATATTCGTCC
AGCAACCAATCCGGTACATATTATTTTGAATTTTCCAGGCCGCTGAGAACAATGGATCAC
CTTCAACAGGATGCTCAGTTCACAATTGGCAAAACAAGTAAGATGTCTGTGGCATTTTGG
TACCCCATGGATGGAAAACCGTGGCACGGGTCTGGTCATTTTTCAATTAACTGCGATTGG
ATACTGTTGGATATCTTGCCAGATAGTTCTGAGCTCACCAAGGTGCCACAGAGAAGTTCT
TGGGATGCTGCTACAGCATTCTCCCTTCTCTTTTCAGTAGTGGCTTTTTGTATATCCATC
TTTGTTGGGCATAGAGTCTCGAGAACCAAGAACATCCCTTTTACACCCATGAGCAATCTT
TAA