Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023349
CDS Infomation

pacid=37441125 polypeptide=PGSC0003DMP400015919 locus=PGSC0003DMG400009047 ID=PGSC0003DMT400023349.v4.03 annot-version=v4.03
Sequence

ATGTTGGACTTGGCAAAGCTACTGTTCTTCCCGTGTTGTGCTAGGGTATCAAAGAGGGGC
CAATCTTTGAAGCCGAAGCATTTAACCATTCTATTTTATGTCTTGTGCATCACTAATGCT
GAGTTGCCTGATAAGCCATTTGAGCAACAACCTGTTTCTCCAGTCAATAAACCTGTTGAA
GCACCTGGCATACCTGATCTGCCCCTGCCGGCGAATGTACCTGGTTTTCATAGACAGCAT
AGGAAACATTCTCCTCATGGTGCGCCATGGCTTAGGCTAGCTCCAGCTCAGCCTCCTGAT
TATGGTCCTTTAGTAACTGCTGCGCACGCTCCTTCCAGTTCCAGCTTATCGAAGCCATCA
ATGAAGAAAAATGGATTGGTGCCTCCTAGTGCTGGCCTTGCACCCCCGCAATCCAGTCCT
AGTACTCTACCCACTGGTTTGGCTCAGCCACCACTTTCTCCTCACACTTCCAACTGTTGT
GGACAAGATATGGTGCTCAAACGAGGAAGCCTGGACTGCGAGTGTGTTTACCCTTTAAAG
ATCGACCTTCTTCTCTTGAATGTCTCATCAAATCCTAATTGGAAACTTTTTCTAAATGAA
TTTGCTTCACAGTTAGGTTTAAAGGTGTCTCAAATTGAGCTGATTAACTTTTATATGGTG
GATCTTTCAAAGCTAAATATATCCATGGATATCACACCAGACAAGGGAGTTAGCTTATCA
TCTAATGAAGCTTCTGCGGTAAACGCTTCATTATCAATGCATAAGATCCAACTAGACCCA
ACACTAGTGGGTGGATACCAATTACTCAACATTACCTTGTTTAAGCCACCAGTTTCATCA
CAAGCTCCTCGTTCTGCTATGTCACCAGTTGAAGCAGCTCCGAATCTGCCTTCAGCTCCT
GCAGTAACAGTATCTTCACACAAAGGGAGACATCCGAGTTTAATTCTTATTGTTGGGATT
GTTGCTGGTATCTTGATCATCACTATCATATCAACACTCTTTATTTGTTTCTGTGGATCT
AATCATGGACAGAAGAAAGGCTCCCACAAAGAAGCTGAAAAACCAATGCGTGTGGACACT
GTTCCAGCTCAGGGATCGTTTCCCCATCCAACTAGTACACGGTTTCTGGCATATGAAGAA
CTGAAAGAAGCTACAAATAACTTTGCACCATCTAGTATACTTGGAGAGGGCGGCTTTGGC
AAAGTTTACAAGGGCGTGCTTAGTGATGGTACTGCTGTTGCAATAAAAAGACTTACTAGT
GGAGGCCAACAAGGAGGTAAAGAGTTTCTAGTTGAGGTTGAGATGCTTAGTAGGCTGCAT
CACCGTAATCTTGTGAAGCTTGTTGGTTACTATAGCAGTCGGGAGTCCTCACAGAACCTA
CTGTGTTATGAGCTTGTTTCAAATGGAAGTTTAGAGGCTTGGCTTCATGGCCACTTAGGA
TTAAACTGCCCACTGGATTGGGACACAAGAATGAAAATTGCGCTTGATGCAGCGAGAGGA
CTTGCATACTTGCACGAAGATTCTCAACCTTGTGTTATCCATAGAGATTTTAAGGCATCA
AATATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCTGATTTTGGCCTTGCAAAACAG
GCCCCAGAAGGCCAGGCTAATTACCTCTCAACTCGTGTTATGGGCACATTTGGGTATGTA
GCCCCTGAATATGCCATGACTGGGCATTTACTGGTAAAAAGTGATGTGTACAGCTATGGG
GTTGTCCTCCTTGAACTGTTGACAGGAAAGAGGCCTGTAGATATGGCACAACCGTCAGGG
CAGGAGAATCTTGTCACTTGGGCCAGACCAATACTTAGAGACAAGGATCGTTTGGAAGAA
CTTGCTGATCCAAGGCTTGAGGGGAAGTACCCAAAGGAGGATTTTGTGCGGGTTTGCACA
ATTGCAGCGGCTTGTGTTGCTCCGGAAGCTAGCCAACGGCCTACAATGGGAGAAGTGGTT
CAATCGCTCAAAATGGTTCAGCGAGTAACAGAGTACCAGGATACTACTACTATAAATTCA
GGTGCTCGACCTAACTTAAGACAGTCATCTACAACCTTTGAATCAGATGGTACCTCGTCT
ATGTTCTCTTCTGGTCCTTACTCTGGTTTGAGTGTCTTTGAGAATGACGTATCTAGGGCA
GCTGTATTCTCAGAAGATCTTCATGAAGGAAGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015919
PEP Infomation

pacid=37441125 transcript=PGSC0003DMT400023349 locus=PGSC0003DMG400009047 ID=PGSC0003DMT400023349.v4.03 annot-version=v4.03
Sequence

MLDLAKLLFFPCCARVSKRGQSLKPKHLTILFYVLCITNAELPDKPFEQQPVSPVNKPVE
APGIPDLPLPANVPGFHRQHRKHSPHGAPWLRLAPAQPPDYGPLVTAAHAPSSSSLSKPS
MKKNGLVPPSAGLAPPQSSPSTLPTGLAQPPLSPHTSNCCGQDMVLKRGSLDCECVYPLK
IDLLLLNVSSNPNWKLFLNEFASQLGLKVSQIELINFYMVDLSKLNISMDITPDKGVSLS
SNEASAVNASLSMHKIQLDPTLVGGYQLLNITLFKPPVSSQAPRSAMSPVEAAPNLPSAP
AVTVSSHKGRHPSLILIVGIVAGILIITIISTLFICFCGSNHGQKKGSHKEAEKPMRVDT
VPAQGSFPHPTSTRFLAYEELKEATNNFAPSSILGEGGFGKVYKGVLSDGTAVAIKRLTS
GGQQGGKEFLVEVEMLSRLHHRNLVKLVGYYSSRESSQNLLCYELVSNGSLEAWLHGHLG
LNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQ
APEGQANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGKRPVDMAQPSG
QENLVTWARPILRDKDRLEELADPRLEGKYPKEDFVRVCTIAAACVAPEASQRPTMGEVV
QSLKMVQRVTEYQDTTTINSGARPNLRQSSTTFESDGTSSMFSSGPYSGLSVFENDVSRA
AVFSEDLHEGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400023349
Transcript Infomation

pacid=37441125 locus=PGSC0003DMG400009047 ID=PGSC0003DMT400023349.v4.03 annot-version=v4.03
Sequence

ATGTTGGACTTGGCAAAGCTACTGTTCTTCCCGTGTTGTGCTAGGGTATCAAAGAGGGGC
CAATCTTTGAAGCCGAAGCATTTAACCATTCTATTTTATGTCTTGTGCATCACTAATGCT
GAGTTGCCTGATAAGCCATTTGAGCAACAACCTGTTTCTCCAGTCAATAAACCTGTTGAA
GCACCTGGCATACCTGATCTGCCCCTGCCGGCGAATGTACCTGGTTTTCATAGACAGCAT
AGGAAACATTCTCCTCATGGTGCGCCATGGCTTAGGCTAGCTCCAGCTCAGCCTCCTGAT
TATGGTCCTTTAGTAACTGCTGCGCACGCTCCTTCCAGTTCCAGCTTATCGAAGCCATCA
ATGAAGAAAAATGGATTGGTGCCTCCTAGTGCTGGCCTTGCACCCCCGCAATCCAGTCCT
AGTACTCTACCCACTGGTTTGGCTCAGCCACCACTTTCTCCTCACACTTCCAACTGTTGT
GGACAAGATATGGTGCTCAAACGAGGAAGCCTGGACTGCGAGTGTGTTTACCCTTTAAAG
ATCGACCTTCTTCTCTTGAATGTCTCATCAAATCCTAATTGGAAACTTTTTCTAAATGAA
TTTGCTTCACAGTTAGGTTTAAAGGTGTCTCAAATTGAGCTGATTAACTTTTATATGGTG
GATCTTTCAAAGCTAAATATATCCATGGATATCACACCAGACAAGGGAGTTAGCTTATCA
TCTAATGAAGCTTCTGCGGTAAACGCTTCATTATCAATGCATAAGATCCAACTAGACCCA
ACACTAGTGGGTGGATACCAATTACTCAACATTACCTTGTTTAAGCCACCAGTTTCATCA
CAAGCTCCTCGTTCTGCTATGTCACCAGTTGAAGCAGCTCCGAATCTGCCTTCAGCTCCT
GCAGTAACAGTATCTTCACACAAAGGGAGACATCCGAGTTTAATTCTTATTGTTGGGATT
GTTGCTGGTATCTTGATCATCACTATCATATCAACACTCTTTATTTGTTTCTGTGGATCT
AATCATGGACAGAAGAAAGGCTCCCACAAAGAAGCTGAAAAACCAATGCGTGTGGACACT
GTTCCAGCTCAGGGATCGTTTCCCCATCCAACTAGTACACGGTTTCTGGCATATGAAGAA
CTGAAAGAAGCTACAAATAACTTTGCACCATCTAGTATACTTGGAGAGGGCGGCTTTGGC
AAAGTTTACAAGGGCGTGCTTAGTGATGGTACTGCTGTTGCAATAAAAAGACTTACTAGT
GGAGGCCAACAAGGAGGTAAAGAGTTTCTAGTTGAGGTTGAGATGCTTAGTAGGCTGCAT
CACCGTAATCTTGTGAAGCTTGTTGGTTACTATAGCAGTCGGGAGTCCTCACAGAACCTA
CTGTGTTATGAGCTTGTTTCAAATGGAAGTTTAGAGGCTTGGCTTCATGGCCACTTAGGA
TTAAACTGCCCACTGGATTGGGACACAAGAATGAAAATTGCGCTTGATGCAGCGAGAGGA
CTTGCATACTTGCACGAAGATTCTCAACCTTGTGTTATCCATAGAGATTTTAAGGCATCA
AATATATTGCTTGAGAACAACTTTCATGCTAAAGTTGCTGATTTTGGCCTTGCAAAACAG
GCCCCAGAAGGCCAGGCTAATTACCTCTCAACTCGTGTTATGGGCACATTTGGGTATGTA
GCCCCTGAATATGCCATGACTGGGCATTTACTGGTAAAAAGTGATGTGTACAGCTATGGG
GTTGTCCTCCTTGAACTGTTGACAGGAAAGAGGCCTGTAGATATGGCACAACCGTCAGGG
CAGGAGAATCTTGTCACTTGGGCCAGACCAATACTTAGAGACAAGGATCGTTTGGAAGAA
CTTGCTGATCCAAGGCTTGAGGGGAAGTACCCAAAGGAGGATTTTGTGCGGGTTTGCACA
ATTGCAGCGGCTTGTGTTGCTCCGGAAGCTAGCCAACGGCCTACAATGGGAGAAGTGGTT
CAATCGCTCAAAATGGTTCAGCGAGTAACAGAGTACCAGGATACTACTACTATAAATTCA
GGTGCTCGACCTAACTTAAGACAGTCATCTACAACCTTTGAATCAGATGGTACCTCGTCT
ATGTTCTCTTCTGGTCCTTACTCTGGTTTGAGTGTCTTTGAGAATGACGTATCTAGGGCA
GCTGTATTCTCAGAAGATCTTCATGAAGGAAGATGA