Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023343
CDS Infomation

pacid=37439356 polypeptide=PGSC0003DMP400015913 locus=PGSC0003DMG400009044 ID=PGSC0003DMT400023343.v4.03 annot-version=v4.03
Sequence

ATGTTTCTGGACAAAAGCCTTACTGCTGCTTTAGATTCTTTTGATAACCTTTTCTGTCGC
CGCTGTCTGGTGTTCGACTGCCGTCTGCATGGCTGTTCACAAATTCTTATTGATGCTATT
GAAAAGCAGCCCTATTCTTCTGATTCTGAAGATGATAGAAAACCTTGCAGTGATTGGTGT
TATCTTAAGGTAAAAGGTGTGGCAAACCAGACTAAATATTCAACTGTAGATCCAGTGGAA
GGACTAGAAAAACACACTTCAGAAGCGGGAGGTAGCACTATGGACATCAAGAGAACTAGA
GATCCAGACGAGCACATTGATAGCAAAATGAAGCATGGAGTATCAGAGTCTATAAACACA
ACTTTAGAGAAGTCAGATCTAGTTTTGGATAACCAACAAGATTCTTCTGGTAAGAGAAGG
AAATTGTCACTCCCTACTGCTGTTAGTGTGGCAGCAGAAGATGGATCTGAGAGCAATGGG
ATGCCTATTATCACCAATGATTATGTATCACATTCACAAGCACCAGATCAGTCTGGCTAT
AATCATGGTACTTCTTTGCATAAGACTGGGGACAATGTCAGAAATGAAGCAGAGGACACT
ATAAAGGAAACTGTGAAGCATGCATCCTGCTCCAAAAATGTACCAGAATGGAAACCCCTA
GAGAAAGAACTATACTTAAAGGGGATAGAGATATTTGGGAGAAATAGTTGCCTCATTGCT
AGGAACTTACTTCCTGGCTTGAAAACTTGTATGGAGGTATCCTCTTACATGGATAACAGA
GCAGCGGCACAACGTGGAGGCTCCTCAAGCTTATTTTCGGAGGATAATGGGAAAACTGAC
ATGGATTACATGGAGCTAGATATTCCGACAAAATCACGTTTTCTTCGTAGAAGAGGCAGA
ACACGCAAACTGAAATATTCCTCAAAGTCTTCTGGGCATCCCTCAATCTGGAGAAGAATG
GCCGATGGAAAGAATCAATCATGTATACAATATAATCCATGTGGATGTCAGCCGATGTGT
GGAAAGCATTGTCCTTGTTTGCAGAATGGTACTTGCTGTGAAAAGTATTGTGGCTGCTCA
AAAAGCTGTAAAAATCGTTTCCGTGGATGCCACTGTGCAAAGAGTCAATGCAGAAGCAGA
CAATGTCCATGTTTTGCTGCTGGACGTGAATGTGATCCTGATGTCTGCCGCAATTGTTGG
GTTAGCTGTGGTGATGGCTCATTGGGTGAGCCTCCTAGGCAAGGAGAAGGTCAATGTGGT
AACATGAGGCTCCTCCTAAGGCAGCAACAAAGGATTCTGCTGTCAAAATCTGATGTTGCT
GGATGGGGAGCCTTCCTGAAGAACCCTGTTTACAAAAATGATTACCTGGGAGAATATACG
GGTGAATTAATTTCTCATCGAGAAGCAGATAAGCGGGGGAAAATATATGATCGTGCAAAT
TCGTCTTTCCTTTTCGACTTGAATGATCAGTATGTCCTCGATGCCTATCGGAAGGGAGAC
AAGCTGAAATTTGCCAATCACTCATCAAACCCAAACTGCTTTGCTAAGGTAATGCTGGTT
GCTGGTGATCATCGAGTTGGGATATTTGCAAAGGAACGTATTGAAGCTAGTGAGGAGCTT
TTCTATGATTATCGTTATGGTCCTGATCAAGCGCCAATATGGGCTAGGAAACCTGAGGGC
ACAAAGACAGATGATTCACCAGCGCCTCAAGGTCGACCAAAGAAACACCAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400015913
PEP Infomation

pacid=37439356 transcript=PGSC0003DMT400023343 locus=PGSC0003DMG400009044 ID=PGSC0003DMT400023343.v4.03 annot-version=v4.03
Sequence

MFLDKSLTAALDSFDNLFCRRCLVFDCRLHGCSQILIDAIEKQPYSSDSEDDRKPCSDWC
YLKVKGVANQTKYSTVDPVEGLEKHTSEAGGSTMDIKRTRDPDEHIDSKMKHGVSESINT
TLEKSDLVLDNQQDSSGKRRKLSLPTAVSVAAEDGSESNGMPIITNDYVSHSQAPDQSGY
NHGTSLHKTGDNVRNEAEDTIKETVKHASCSKNVPEWKPLEKELYLKGIEIFGRNSCLIA
RNLLPGLKTCMEVSSYMDNRAAAQRGGSSSLFSEDNGKTDMDYMELDIPTKSRFLRRRGR
TRKLKYSSKSSGHPSIWRRMADGKNQSCIQYNPCGCQPMCGKHCPCLQNGTCCEKYCGCS
KSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRQGEGQCG
NMRLLLRQQQRILLSKSDVAGWGAFLKNPVYKNDYLGEYTGELISHREADKRGKIYDRAN
SSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCFAKVMLVAGDHRVGIFAKERIEASEEL
FYDYRYGPDQAPIWARKPEGTKTDDSPAPQGRPKKHQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400023343
Transcript Infomation

pacid=37439356 locus=PGSC0003DMG400009044 ID=PGSC0003DMT400023343.v4.03 annot-version=v4.03
Sequence

ATGTTTCTGGACAAAAGCCTTACTGCTGCTTTAGATTCTTTTGATAACCTTTTCTGTCGC
CGCTGTCTGGTGTTCGACTGCCGTCTGCATGGCTGTTCACAAATTCTTATTGATGCTATT
GAAAAGCAGCCCTATTCTTCTGATTCTGAAGATGATAGAAAACCTTGCAGTGATTGGTGT
TATCTTAAGGTAAAAGGTGTGGCAAACCAGACTAAATATTCAACTGTAGATCCAGTGGAA
GGACTAGAAAAACACACTTCAGAAGCGGGAGGTAGCACTATGGACATCAAGAGAACTAGA
GATCCAGACGAGCACATTGATAGCAAAATGAAGCATGGAGTATCAGAGTCTATAAACACA
ACTTTAGAGAAGTCAGATCTAGTTTTGGATAACCAACAAGATTCTTCTGGTAAGAGAAGG
AAATTGTCACTCCCTACTGCTGTTAGTGTGGCAGCAGAAGATGGATCTGAGAGCAATGGG
ATGCCTATTATCACCAATGATTATGTATCACATTCACAAGCACCAGATCAGTCTGGCTAT
AATCATGGTACTTCTTTGCATAAGACTGGGGACAATGTCAGAAATGAAGCAGAGGACACT
ATAAAGGAAACTGTGAAGCATGCATCCTGCTCCAAAAATGTACCAGAATGGAAACCCCTA
GAGAAAGAACTATACTTAAAGGGGATAGAGATATTTGGGAGAAATAGTTGCCTCATTGCT
AGGAACTTACTTCCTGGCTTGAAAACTTGTATGGAGGTATCCTCTTACATGGATAACAGA
GCAGCGGCACAACGTGGAGGCTCCTCAAGCTTATTTTCGGAGGATAATGGGAAAACTGAC
ATGGATTACATGGAGCTAGATATTCCGACAAAATCACGTTTTCTTCGTAGAAGAGGCAGA
ACACGCAAACTGAAATATTCCTCAAAGTCTTCTGGGCATCCCTCAATCTGGAGAAGAATG
GCCGATGGAAAGAATCAATCATGTATACAATATAATCCATGTGGATGTCAGCCGATGTGT
GGAAAGCATTGTCCTTGTTTGCAGAATGGTACTTGCTGTGAAAAGTATTGTGGCTGCTCA
AAAAGCTGTAAAAATCGTTTCCGTGGATGCCACTGTGCAAAGAGTCAATGCAGAAGCAGA
CAATGTCCATGTTTTGCTGCTGGACGTGAATGTGATCCTGATGTCTGCCGCAATTGTTGG
GTTAGCTGTGGTGATGGCTCATTGGGTGAGCCTCCTAGGCAAGGAGAAGGTCAATGTGGT
AACATGAGGCTCCTCCTAAGGCAGCAACAAAGGATTCTGCTGTCAAAATCTGATGTTGCT
GGATGGGGAGCCTTCCTGAAGAACCCTGTTTACAAAAATGATTACCTGGGAGAATATACG
GGTGAATTAATTTCTCATCGAGAAGCAGATAAGCGGGGGAAAATATATGATCGTGCAAAT
TCGTCTTTCCTTTTCGACTTGAATGATCAGTATGTCCTCGATGCCTATCGGAAGGGAGAC
AAGCTGAAATTTGCCAATCACTCATCAAACCCAAACTGCTTTGCTAAGGTAATGCTGGTT
GCTGGTGATCATCGAGTTGGGATATTTGCAAAGGAACGTATTGAAGCTAGTGAGGAGCTT
TTCTATGATTATCGTTATGGTCCTGATCAAGCGCCAATATGGGCTAGGAAACCTGAGGGC
ACAAAGACAGATGATTCACCAGCGCCTCAAGGTCGACCAAAGAAACACCAATAA