Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023333
CDS Infomation

pacid=37437816 polypeptide=PGSC0003DMP400015903 locus=PGSC0003DMG400009040 ID=PGSC0003DMT400023333.v4.03 annot-version=v4.03
Sequence

ATGAATGATCTTGACTTCAACCGCGACAAAGATCTAGCAAAAGATTTTCTGTCGAACTTC
GCTGATTCTAATGGTGAAGCCAAATACATGAACATTCTCCAAGATGTTGCTAATCGTAAA
ACCAAGGCTATTGAGATTGAGCTCGAAGACTTAGCGGACTACAAGGACTTGGATGAGGAG
TTTCTTCGAAGAATTGCTGAGAACACTAAACGATATATCACAATATTAGCTAGTGCGATT
GATGAGCTCATGCCAGAGCCAACGGAAGCTCTTCCAGATGATGATCATGATATTTTGATG
ACTCAGCGATCAGAGGAAGTAACCGAGAACACTGATGGTTCTGATCCAAAACAAAAGATG
CCCCCGGAGATCAAGCGGTTCTATGAAGTGTATGTCAAAGCATCCTCAAAAGGTCGGCCC
TTTACAATTAGGGAGGTCAAGGCTTCATACATTGGTCAGCTTGTCAGGATATCTGGTATT
GTGACACGTTGTTCGGACGTCAAACCACTGATGCAGGTGGCTGTATATACATGTGAAGAA
TGTGGATTTGAAATCTATCAGGAAGTAACTGCAAGAGTATTCATGCCTCTGTTTGAATGC
CCATCCAAACGCTGCACTGTAAATAAAGCAAAAGGGAACCTCATCCTTCAACTTCGGGCA
TCAAAGTTTTTAAAGTTTCAAGAGGCCAAAATTCAAGAGTTGGCTGAACATGTACCCAAA
GGTCACATTCCGCGATCAATGACTGTGCACTTCAGAGGAGAACTTACAAGGAAGGTATCT
CCTGGTGACGTTGTTGAACTGTCAGGCATTTTTCTACCTATGCCTTACACAGGATTTAGA
GCTATGCGAGCTGGGTTAATTGCAGATACGTACTTGGAAGCAATGTCTGTTAGCCATTTC
AAGAAAAAATATGAAGATTATGAACTTAGAGGAGATGAGGAAGAGCAGATTGCAAGGTTA
GCTGAGGATGGAGATATATATAACAAGTTGTCTCGTTCCTTGGCTCCTGAAATTTTTGGG
CATGAGGATATTAAGAAAGCTCTTCTTCTCCTTCTAGTGGGTGCTCCTCATCGACAGTTG
AAGGATGGTATGAAGATCAGAGGTGATTTACATATATGTTTGATGGGTGATCCCGGGGTA
GCAAAGAGCCAGCTTCTCAAACACATAATCAATGTTGCACCCAGAGGTGTTTACACAACT
GGTAAGGGTAGCAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCAGTAACTAAT
GAGATGGTTCTTGAAGGCGGAGCACTGGTATTAGCAGATATGGGTATATGTGCTATTGAT
GAATTTGACAAGATGGACGACTCTGATAGAACAGCTATTCATGAAGTAATGGAGCAGCAG
ACTGTTAGTATTGCAAAGGCTGGGATCACTACATCTCTAAATGCAAGGACTGCAGTGCTT
GCTGCTGCTAATCCTGCATGGGGAAGATATGATATGAGAAGGACACCAGCTGAAAATATT
AATCTTCCTCCAGCTCTTCTATCAAGATTTGATCTTTTATGGCTAATCTTAGATCGAGCA
GATATGGATTCCGATCTTGAATTGGCTAGACATGTGGTTTATGTGCATCAAAACAAAGAA
TCTCCTGCTCTTGGGTTCACTCCACTTGAACCATCTGTGCTTCGGGCTTATATATCAGCT
GCAAGGAGATTGTCTCCCTCTGTACCAAAGGAGCTAGAGGACTATATTGCTGGTGCATAT
TCTAGTATCAGGCAAGAAGAAGCAAAATCAAACACCCCTCACTCCTATACAACCGTCAGA
ACACTTCTAAGCATCCTGAGAATATCATCTGCACTTGCCAGACTGCGTTTCTCAGAAAAA
GTTGCTCAGAGTGATGTGGATGAGGCACTTCGGCTAATGCAGATGTCGAAGTTCTCCTTG
TATTCAGATGATCGGCAAAGATCTGGCCTGGATGCAATATCTGACATTTATTCAATCCTG
CGTGATGAGGCTGCTAGGATGAACAGGCTGGAACTAAGCTATGCCCAGGCTCTGAACTGG
ATTTCCAGAAAGGGATACAGTGAAGCTCAACTCAAGGAGTGTTTGGAAGAATATGCAGCC
TTGAATGTGTGGCAGATTCATCCTGATAGCTTTAACATCAGATTCATTGATGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015903
PEP Infomation

pacid=37437816 transcript=PGSC0003DMT400023333 locus=PGSC0003DMG400009040 ID=PGSC0003DMT400023333.v4.03 annot-version=v4.03
Sequence

MNDLDFNRDKDLAKDFLSNFADSNGEAKYMNILQDVANRKTKAIEIELEDLADYKDLDEE
FLRRIAENTKRYITILASAIDELMPEPTEALPDDDHDILMTQRSEEVTENTDGSDPKQKM
PPEIKRFYEVYVKASSKGRPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVAVYTCEE
CGFEIYQEVTARVFMPLFECPSKRCTVNKAKGNLILQLRASKFLKFQEAKIQELAEHVPK
GHIPRSMTVHFRGELTRKVSPGDVVELSGIFLPMPYTGFRAMRAGLIADTYLEAMSVSHF
KKKYEDYELRGDEEEQIARLAEDGDIYNKLSRSLAPEIFGHEDIKKALLLLLVGAPHRQL
KDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGKGSSGVGLTAAVQKDPVTN
EMVLEGGALVLADMGICAIDEFDKMDDSDRTAIHEVMEQQTVSIAKAGITTSLNARTAVL
AAANPAWGRYDMRRTPAENINLPPALLSRFDLLWLILDRADMDSDLELARHVVYVHQNKE
SPALGFTPLEPSVLRAYISAARRLSPSVPKELEDYIAGAYSSIRQEEAKSNTPHSYTTVR
TLLSILRISSALARLRFSEKVAQSDVDEALRLMQMSKFSLYSDDRQRSGLDAISDIYSIL
RDEAARMNRLELSYAQALNWISRKGYSEAQLKECLEEYAALNVWQIHPDSFNIRFIDA*

Transcript Sequence

Transcript ID

PGSC0003DMT400023333
Transcript Infomation

pacid=37437816 locus=PGSC0003DMG400009040 ID=PGSC0003DMT400023333.v4.03 annot-version=v4.03
Sequence

ATGAATGATCTTGACTTCAACCGCGACAAAGATCTAGCAAAAGATTTTCTGTCGAACTTC
GCTGATTCTAATGGTGAAGCCAAATACATGAACATTCTCCAAGATGTTGCTAATCGTAAA
ACCAAGGCTATTGAGATTGAGCTCGAAGACTTAGCGGACTACAAGGACTTGGATGAGGAG
TTTCTTCGAAGAATTGCTGAGAACACTAAACGATATATCACAATATTAGCTAGTGCGATT
GATGAGCTCATGCCAGAGCCAACGGAAGCTCTTCCAGATGATGATCATGATATTTTGATG
ACTCAGCGATCAGAGGAAGTAACCGAGAACACTGATGGTTCTGATCCAAAACAAAAGATG
CCCCCGGAGATCAAGCGGTTCTATGAAGTGTATGTCAAAGCATCCTCAAAAGGTCGGCCC
TTTACAATTAGGGAGGTCAAGGCTTCATACATTGGTCAGCTTGTCAGGATATCTGGTATT
GTGACACGTTGTTCGGACGTCAAACCACTGATGCAGGTGGCTGTATATACATGTGAAGAA
TGTGGATTTGAAATCTATCAGGAAGTAACTGCAAGAGTATTCATGCCTCTGTTTGAATGC
CCATCCAAACGCTGCACTGTAAATAAAGCAAAAGGGAACCTCATCCTTCAACTTCGGGCA
TCAAAGTTTTTAAAGTTTCAAGAGGCCAAAATTCAAGAGTTGGCTGAACATGTACCCAAA
GGTCACATTCCGCGATCAATGACTGTGCACTTCAGAGGAGAACTTACAAGGAAGGTATCT
CCTGGTGACGTTGTTGAACTGTCAGGCATTTTTCTACCTATGCCTTACACAGGATTTAGA
GCTATGCGAGCTGGGTTAATTGCAGATACGTACTTGGAAGCAATGTCTGTTAGCCATTTC
AAGAAAAAATATGAAGATTATGAACTTAGAGGAGATGAGGAAGAGCAGATTGCAAGGTTA
GCTGAGGATGGAGATATATATAACAAGTTGTCTCGTTCCTTGGCTCCTGAAATTTTTGGG
CATGAGGATATTAAGAAAGCTCTTCTTCTCCTTCTAGTGGGTGCTCCTCATCGACAGTTG
AAGGATGGTATGAAGATCAGAGGTGATTTACATATATGTTTGATGGGTGATCCCGGGGTA
GCAAAGAGCCAGCTTCTCAAACACATAATCAATGTTGCACCCAGAGGTGTTTACACAACT
GGTAAGGGTAGCAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCAGTAACTAAT
GAGATGGTTCTTGAAGGCGGAGCACTGGTATTAGCAGATATGGGTATATGTGCTATTGAT
GAATTTGACAAGATGGACGACTCTGATAGAACAGCTATTCATGAAGTAATGGAGCAGCAG
ACTGTTAGTATTGCAAAGGCTGGGATCACTACATCTCTAAATGCAAGGACTGCAGTGCTT
GCTGCTGCTAATCCTGCATGGGGAAGATATGATATGAGAAGGACACCAGCTGAAAATATT
AATCTTCCTCCAGCTCTTCTATCAAGATTTGATCTTTTATGGCTAATCTTAGATCGAGCA
GATATGGATTCCGATCTTGAATTGGCTAGACATGTGGTTTATGTGCATCAAAACAAAGAA
TCTCCTGCTCTTGGGTTCACTCCACTTGAACCATCTGTGCTTCGGGCTTATATATCAGCT
GCAAGGAGATTGTCTCCCTCTGTACCAAAGGAGCTAGAGGACTATATTGCTGGTGCATAT
TCTAGTATCAGGCAAGAAGAAGCAAAATCAAACACCCCTCACTCCTATACAACCGTCAGA
ACACTTCTAAGCATCCTGAGAATATCATCTGCACTTGCCAGACTGCGTTTCTCAGAAAAA
GTTGCTCAGAGTGATGTGGATGAGGCACTTCGGCTAATGCAGATGTCGAAGTTCTCCTTG
TATTCAGATGATCGGCAAAGATCTGGCCTGGATGCAATATCTGACATTTATTCAATCCTG
CGTGATGAGGCTGCTAGGATGAACAGGCTGGAACTAAGCTATGCCCAGGCTCTGAACTGG
ATTTCCAGAAAGGGATACAGTGAAGCTCAACTCAAGGAGTGTTTGGAAGAATATGCAGCC
TTGAATGTGTGGCAGATTCATCCTGATAGCTTTAACATCAGATTCATTGATGCATGA