Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023302
CDS Infomation

pacid=37441160 polypeptide=PGSC0003DMP400015874 locus=PGSC0003DMG400009025 ID=PGSC0003DMT400023302.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGATTTGGAAACATCGCCGGCGGCAGCAGCAGCATCGACCGTCGTTGATGAT
AGCATTGAGGATGCCTGTAGTATTTGTCTTGAGCCGTTCAACTCCGATGATCCTCCTGCT
GTAACAGATTGTAAGCATGAATATCATTTACAGTGTATTCTTGAATGGTCTCAGAGAAGC
AAGGAGTGCCCAATTTGTTGGAGGGTTCTTGCATTGAAAGACCCTGCAAGCCAAGAGCTA
CTAGCTGCAGTGGAGATTGAAAGGAACATGAGGTCAAGGCTTAATGTGCGTCATACCAAC
GAAAATGTTGAAGCCAACCATGATGCCGCGCAGCAGAATGATTCAGATTTTGAGGAGCGA
ATTATGCGACATTTTGCTGCTGCGACCAGTAGAGTCCGTCTTGTCAACAGAAGGAGAAGA
CAGGCGTCTTCAGCAATTGGTCCTACACAGGTTGTACCTTCTGTGCCGGTAGGAGTTGGT
TCAAACCAGACACAGAATAATGAATCCACAGTACAGTTCCAAGGCTTTGGGTTTTTTGGG
GATGGGTCTGCTGCTTCTGCAACTTCATCTAGTATTAGACCTGCATCATCATCAGTTCCT
GCCCATGGAAGTGATCCTTCTAAGCTTAGCCAACCACCAACTTATGGTCCCCAGGGGTCA
AGCTCATCCGAGTTTCTTGCATTTTCTGAATCTATAAAATCCAAATGGTCTTCTGCTTCT
GCGAGGTATAAGGACTCAATCTCAAAAGGTACTCGTGGTTTTAAGGAAAAATTATTAGCA
CGCAACACCACTGTCAAGGAATTTGGCAAAGAAGTTCAGCGTGAGATGAGTGCTGGAATA
GCTGGCGTTTCAAGAATGATTGAACGACTTGATCTTACTTCAAAACGTACTGGAGCTACT
GAACCATCTGCATGTACCATGGGTACCTCAAACTTTCCTGGTAGAGGAGTGAGTGAGCAA
GGAAATGTGACATTTCAAGCGCGTGATGGTTGCAGGAAGAATTCTACAATTGGAGTAACT
CCTACCAATCCCTCATTGATCTCCAACACCAACACCAACACTGGCCAAATGGAAATTTCT
CTTGGACAGAATGGAAACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015874
PEP Infomation

pacid=37441160 transcript=PGSC0003DMT400023302 locus=PGSC0003DMG400009025 ID=PGSC0003DMT400023302.v4.03 annot-version=v4.03
Sequence

MANDLETSPAAAAASTVVDDSIEDACSICLEPFNSDDPPAVTDCKHEYHLQCILEWSQRS
KECPICWRVLALKDPASQELLAAVEIERNMRSRLNVRHTNENVEANHDAAQQNDSDFEER
IMRHFAAATSRVRLVNRRRRQASSAIGPTQVVPSVPVGVGSNQTQNNESTVQFQGFGFFG
DGSAASATSSSIRPASSSVPAHGSDPSKLSQPPTYGPQGSSSSEFLAFSESIKSKWSSAS
ARYKDSISKGTRGFKEKLLARNTTVKEFGKEVQREMSAGIAGVSRMIERLDLTSKRTGAT
EPSACTMGTSNFPGRGVSEQGNVTFQARDGCRKNSTIGVTPTNPSLISNTNTNTGQMEIS
LGQNGN*

Transcript Sequence

Transcript ID

PGSC0003DMT400023302
Transcript Infomation

pacid=37441160 locus=PGSC0003DMG400009025 ID=PGSC0003DMT400023302.v4.03 annot-version=v4.03
Sequence

ATGGCGAACGATTTGGAAACATCGCCGGCGGCAGCAGCAGCATCGACCGTCGTTGATGAT
AGCATTGAGGATGCCTGTAGTATTTGTCTTGAGCCGTTCAACTCCGATGATCCTCCTGCT
GTAACAGATTGTAAGCATGAATATCATTTACAGTGTATTCTTGAATGGTCTCAGAGAAGC
AAGGAGTGCCCAATTTGTTGGAGGGTTCTTGCATTGAAAGACCCTGCAAGCCAAGAGCTA
CTAGCTGCAGTGGAGATTGAAAGGAACATGAGGTCAAGGCTTAATGTGCGTCATACCAAC
GAAAATGTTGAAGCCAACCATGATGCCGCGCAGCAGAATGATTCAGATTTTGAGGAGCGA
ATTATGCGACATTTTGCTGCTGCGACCAGTAGAGTCCGTCTTGTCAACAGAAGGAGAAGA
CAGGCGTCTTCAGCAATTGGTCCTACACAGGTTGTACCTTCTGTGCCGGTAGGAGTTGGT
TCAAACCAGACACAGAATAATGAATCCACAGTACAGTTCCAAGGCTTTGGGTTTTTTGGG
GATGGGTCTGCTGCTTCTGCAACTTCATCTAGTATTAGACCTGCATCATCATCAGTTCCT
GCCCATGGAAGTGATCCTTCTAAGCTTAGCCAACCACCAACTTATGGTCCCCAGGGGTCA
AGCTCATCCGAGTTTCTTGCATTTTCTGAATCTATAAAATCCAAATGGTCTTCTGCTTCT
GCGAGGTATAAGGACTCAATCTCAAAAGGTACTCGTGGTTTTAAGGAAAAATTATTAGCA
CGCAACACCACTGTCAAGGAATTTGGCAAAGAAGTTCAGCGTGAGATGAGTGCTGGAATA
GCTGGCGTTTCAAGAATGATTGAACGACTTGATCTTACTTCAAAACGTACTGGAGCTACT
GAACCATCTGCATGTACCATGGGTACCTCAAACTTTCCTGGTAGAGGAGTGAGTGAGCAA
GGAAATGTGACATTTCAAGCGCGTGATGGTTGCAGGAAGAATTCTACAATTGGAGTAACT
CCTACCAATCCCTCATTGATCTCCAACACCAACACCAACACTGGCCAAATGGAAATTTCT
CTTGGACAGAATGGAAACTGA