Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023284
CDS Infomation

pacid=37436637 polypeptide=PGSC0003DMP400015860 locus=PGSC0003DMG400009019 ID=PGSC0003DMT400023284.v4.03 annot-version=v4.03
Sequence

ATGGGGACCGAGCGGAAGAGGAAGGTGAGCTTGTTTGATGTGGTGGATGACTCGGCCGCG
AAGAAGCTCAATGGAGGCTTAAATGGTGGAAACAGCATGACGGCTTCGATCAACAAGTGG
AATGGAAAGCCTTACTCACAGAGATTTTATGATATTTTGGAGAAGAGGAAGACTCTTCCG
GTTTGGCATCAAAAGGAGGAGTTCTTACAGGCTTTGAAATCTAATCAAACTCTTATCTTG
GTCGGTGAAACTGGTAGTGGTAAAACCACTCAGATTCCACAGTTTGTTTTGGATGCTGTT
GAAGTAGAGACAGCTGATAAGCGCAGGAAATATATGATAGGTTGCACTCAACCTCGGAGG
GTGGCTGCGATGTCTGTCTCTCGTCGTGTTGCTGAAGAGATGGATGTTGTAATTGGGGAA
GAAGTTGGATATAGCATTCGTTTTGAGGACTGCACTAGTGCTAGAACTGTTTTAAAATAC
TTAACAGATGGTATGCTTTTAAGAGAAGCAATGGCAGATCCTCTATTGGAACGCTACAAA
GTAATTATTCTTGATGAAGCTCATGAAAGAACTTTGGCAACAGATGTCCTGTTTGGGCTT
TTGAAGGAGGTGTTGAAAAATAGACCAGACCTAAAGCTAGTTGTTATGAGTGCCACACTT
GAAGCAGAGAAGTTTCAGGGTTACTTCTTTGGTGCACCTCTCATGAAAGTTCCTGGAAGG
CTCCATCCGGTGGAAATTTTCTACACTCAGGATCCTGAGAGAGACTATCTTGAGGCTGCC
ATTCGGACTGTTGTGCAGATACACACATGTGAACCTCCTGGTGACATTCTTGTTTTCCTC
ACCGGAGAAGAGGAGATTGAAGATGCATGTCGCAAAATCACAAAGGAAATTGGTAATATG
GGTGATCAAGTAGGCCCTGTTAAACCGGTGCCTCTTTATTCTACACTTCCCCCCGCTATG
CAGCAAAAGATATTTGAACCAGCCCCACCACCAGTTGTGGAGGGTGGTCCTCCTGGCAGG
AAGATCGTTGTGTCAACCAACATTGCAGAAACATCTTTGACAATAGATGGCATTGTTTAT
GTCATAGATCCAGGATTTGCTAAGCAAAAGGTTTATAATCCAAGGGTGCGTGTGGAATCT
TTGTTGGTGTCTCCTATTTCAAAGGCCAGTGCACACCAGAGATCAGGACGTGCTGGAAGA
ACACAGCCAGGAAAATGCTTTAGACTTTACACAGAGAAAAGCTTCCATAATGACCTTCAA
CCCCAGACATATCCAGAAATACTACGGTCAAATTTGGCTAATACAGTTCTAACTCTGAAG
AAGCTAGGTATTGATGACCTGGTTCATTTTGATTTTATGGATCCTCCTGCCCCCGAGACG
TTGATGAGAGCACTAGAGGTTTTAAATTACTTGGGAGCATTGGATGATGATGGAAACATG
ACCCGGTTGGGTGAGATAATGAGTGAATTTCCTCTCGACCCTCAGATGGGGAAAATGCTT
GTTGTCAGCCCAGAATTCAACTGCTCCAACGAGATCCTCTCAATATCTGCCATGCTATCA
GTACCCAATTGCTTTGTCCGGCCTAGGGAGGCTCAAAAAGCTGCGGATGAAGCAAAGAAT
CGGTTCGGTCACATAGATGGGGATCATTTGACGTTGCTGAATGTGTATCATGCCTACAAA
CAAAACCAGGAGGATCCTCAATGGTGTTATGAGAACTTCATCAATCAGAGGGCACTCAAA
TCAGCTGACAATGTGAGGCAACAACTTTCTCGCATAATGGCCAGGTTCAACCTCAAGTTA
TGCAGCACAGACTTCAACAGTCGCGAGTACTATGTGAACATAAGAAAGGCTATGTTAGCT
GGATATTTCATGCAGGTTGCACACCTAGAGCGTACTGGGCATTATCTAACCGTTAAAGAC
AATCAAGTGGTGCACTTGCATCCTTCAAATTGCCTGGATCACAAGCCAGAATGGGTTATA
TATAATGAATATGTCTTAACAAGCAGAAATTTCATCCGCACTGTAACTGATATCCGTGGT
GAATGGTTGGTTGATATTGCACCACACTACTATGACCTTGCAAACTTTCCACAATGCGAG
GCAAAACGAGTGCTTGAGCGGTTATACAAGAAGCGGGAGCGAGAAAAAGATGAAAGCAAG
AGCAAAAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015860
PEP Infomation

pacid=37436637 transcript=PGSC0003DMT400023284 locus=PGSC0003DMG400009019 ID=PGSC0003DMT400023284.v4.03 annot-version=v4.03
Sequence

MGTERKRKVSLFDVVDDSAAKKLNGGLNGGNSMTASINKWNGKPYSQRFYDILEKRKTLP
VWHQKEEFLQALKSNQTLILVGETGSGKTTQIPQFVLDAVEVETADKRRKYMIGCTQPRR
VAAMSVSRRVAEEMDVVIGEEVGYSIRFEDCTSARTVLKYLTDGMLLREAMADPLLERYK
VIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFGAPLMKVPGR
LHPVEIFYTQDPERDYLEAAIRTVVQIHTCEPPGDILVFLTGEEEIEDACRKITKEIGNM
GDQVGPVKPVPLYSTLPPAMQQKIFEPAPPPVVEGGPPGRKIVVSTNIAETSLTIDGIVY
VIDPGFAKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFHNDLQ
PQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNM
TRLGEIMSEFPLDPQMGKMLVVSPEFNCSNEILSISAMLSVPNCFVRPREAQKAADEAKN
RFGHIDGDHLTLLNVYHAYKQNQEDPQWCYENFINQRALKSADNVRQQLSRIMARFNLKL
CSTDFNSREYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVI
YNEYVLTSRNFIRTVTDIRGEWLVDIAPHYYDLANFPQCEAKRVLERLYKKREREKDESK
SKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400023284
Transcript Infomation

pacid=37436637 locus=PGSC0003DMG400009019 ID=PGSC0003DMT400023284.v4.03 annot-version=v4.03
Sequence

ATGGGGACCGAGCGGAAGAGGAAGGTGAGCTTGTTTGATGTGGTGGATGACTCGGCCGCG
AAGAAGCTCAATGGAGGCTTAAATGGTGGAAACAGCATGACGGCTTCGATCAACAAGTGG
AATGGAAAGCCTTACTCACAGAGATTTTATGATATTTTGGAGAAGAGGAAGACTCTTCCG
GTTTGGCATCAAAAGGAGGAGTTCTTACAGGCTTTGAAATCTAATCAAACTCTTATCTTG
GTCGGTGAAACTGGTAGTGGTAAAACCACTCAGATTCCACAGTTTGTTTTGGATGCTGTT
GAAGTAGAGACAGCTGATAAGCGCAGGAAATATATGATAGGTTGCACTCAACCTCGGAGG
GTGGCTGCGATGTCTGTCTCTCGTCGTGTTGCTGAAGAGATGGATGTTGTAATTGGGGAA
GAAGTTGGATATAGCATTCGTTTTGAGGACTGCACTAGTGCTAGAACTGTTTTAAAATAC
TTAACAGATGGTATGCTTTTAAGAGAAGCAATGGCAGATCCTCTATTGGAACGCTACAAA
GTAATTATTCTTGATGAAGCTCATGAAAGAACTTTGGCAACAGATGTCCTGTTTGGGCTT
TTGAAGGAGGTGTTGAAAAATAGACCAGACCTAAAGCTAGTTGTTATGAGTGCCACACTT
GAAGCAGAGAAGTTTCAGGGTTACTTCTTTGGTGCACCTCTCATGAAAGTTCCTGGAAGG
CTCCATCCGGTGGAAATTTTCTACACTCAGGATCCTGAGAGAGACTATCTTGAGGCTGCC
ATTCGGACTGTTGTGCAGATACACACATGTGAACCTCCTGGTGACATTCTTGTTTTCCTC
ACCGGAGAAGAGGAGATTGAAGATGCATGTCGCAAAATCACAAAGGAAATTGGTAATATG
GGTGATCAAGTAGGCCCTGTTAAACCGGTGCCTCTTTATTCTACACTTCCCCCCGCTATG
CAGCAAAAGATATTTGAACCAGCCCCACCACCAGTTGTGGAGGGTGGTCCTCCTGGCAGG
AAGATCGTTGTGTCAACCAACATTGCAGAAACATCTTTGACAATAGATGGCATTGTTTAT
GTCATAGATCCAGGATTTGCTAAGCAAAAGGTTTATAATCCAAGGGTGCGTGTGGAATCT
TTGTTGGTGTCTCCTATTTCAAAGGCCAGTGCACACCAGAGATCAGGACGTGCTGGAAGA
ACACAGCCAGGAAAATGCTTTAGACTTTACACAGAGAAAAGCTTCCATAATGACCTTCAA
CCCCAGACATATCCAGAAATACTACGGTCAAATTTGGCTAATACAGTTCTAACTCTGAAG
AAGCTAGGTATTGATGACCTGGTTCATTTTGATTTTATGGATCCTCCTGCCCCCGAGACG
TTGATGAGAGCACTAGAGGTTTTAAATTACTTGGGAGCATTGGATGATGATGGAAACATG
ACCCGGTTGGGTGAGATAATGAGTGAATTTCCTCTCGACCCTCAGATGGGGAAAATGCTT
GTTGTCAGCCCAGAATTCAACTGCTCCAACGAGATCCTCTCAATATCTGCCATGCTATCA
GTACCCAATTGCTTTGTCCGGCCTAGGGAGGCTCAAAAAGCTGCGGATGAAGCAAAGAAT
CGGTTCGGTCACATAGATGGGGATCATTTGACGTTGCTGAATGTGTATCATGCCTACAAA
CAAAACCAGGAGGATCCTCAATGGTGTTATGAGAACTTCATCAATCAGAGGGCACTCAAA
TCAGCTGACAATGTGAGGCAACAACTTTCTCGCATAATGGCCAGGTTCAACCTCAAGTTA
TGCAGCACAGACTTCAACAGTCGCGAGTACTATGTGAACATAAGAAAGGCTATGTTAGCT
GGATATTTCATGCAGGTTGCACACCTAGAGCGTACTGGGCATTATCTAACCGTTAAAGAC
AATCAAGTGGTGCACTTGCATCCTTCAAATTGCCTGGATCACAAGCCAGAATGGGTTATA
TATAATGAATATGTCTTAACAAGCAGAAATTTCATCCGCACTGTAACTGATATCCGTGGT
GAATGGTTGGTTGATATTGCACCACACTACTATGACCTTGCAAACTTTCCACAATGCGAG
GCAAAACGAGTGCTTGAGCGGTTATACAAGAAGCGGGAGCGAGAAAAAGATGAAAGCAAG
AGCAAAAAATGA