Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023280
CDS Infomation

pacid=37440039 polypeptide=PGSC0003DMP400015857 locus=PGSC0003DMG400009017 ID=PGSC0003DMT400023280.v4.03 annot-version=v4.03
Sequence

ATGGCACCACCAAATGATCCAATTAACTCAATTCTCAATGTAATGAAAACTCATAAAGAG
GACAACTTTTTTGAATTATCTAATGGAAAACTCTTTGTTAAGAAAGTTCCATTACTCTTT
GAAGTTCCAAGCAATGTTAGTTTCTCAAGCTTTTCATCAATTTGCCAAACATCCAGTGCT
CCACTTCCCCTGTTCCATCGCGCTCATTCAACGTCTTCCAAAGGCGGATTCTTGGGATTC
AACAAAGATGATCCATCTCATCACTTGATGAATTCCTTGGGGAAATTCACTTGCAGAAAT
TTCCTCAGCATTTTCAGGTTCAAGACTTGGTGGTCTACACAATGGGTAGGAAATTCTGGT
TCTGATTTGCAAATGGAAACTCAATGGGTACTCTTAGATGTCCCTGAGATAAAATCTTAT
GTGATTATTATACCAATAATTGAAGGGAAATTCAGGTCTGCACTTCACCCTGGCATAGAT
GGTCATGTTCTTATTTGTGCTGAGAGTGGTTCTAGCCAAGTGAAAGCATCATCCTTTGGC
GCTATCGCGTATGTTCATGTGTCTGATAATCCTTACACCCTGATGAAAGAAGCTTATACT
TCTCTTAGAGTTTATCTAAATACCTTTAAGCTCTTGGAAGAGAAATCAGTTCCATCCCTT
GTGGATAAATTTGGTTGGTGTACTTGGGATGCTTTTTACTTAACTGTTGAACCTACAGGG
GTTTGGCATGGAGTGAAAGAGTTTTCCCAAGGTGGGGTATCGCCGCGATTCCTTATTATT
GATGATGGTTGGCAAAGTATCAATTTTGATCATCAAGAACCTCATGAGGATGCGAAAAAT
TTGGTTCTTGGTGGAACTCAAATGACTGCCAGGCTTCATAGGCTTGATGAAGGTGAGAAA
TTCAGGAAGTACAAAGGTGGAGCCTTGTTAGGACCAAATCCTCCACTTTTTGACCTCAAT
AAGCCAAAGATACTAATCTCTAAGGCAATTGAGATTGAGCATGCAGAAAAGGCTCGCGAC
AAGGCGATTCAGTCTGGAGTTACTGACCTGTCATTGTTTGAAATAAAGATTGAGAAACTG
AAGAAGGAGTTGGATGAAATGTTTGGTGGGGACCAAGAAAACTCTCTTCAGCTCATGTGC
AAGGATGGTGAAGAATTGGAATTTAACTCCGAGGACTCGGGGATGAAAGCGTTTACCAGG
GATTTGAGAACACATTTCAAAGGCCTGGATGATATTTATGTATGGCATGCCTTGTGTGGT
GCTTGGGGTGGTGTAAGGCCTGGAACTACCCACCTGAATTCCAAGATCATCGCGTGTAAA
CTTTCTCAGGGCCTTGATGGGACAATGGATGATCTTGCAGTGATCAAAATAGTAGAAGGT
GGCATTGGACTTGTTCATCCTGATCAAGCTGATGATTTTTATGATTCAATGCATTCTTAC
CTCTCTGAAGTGGGAATTACAGGAGTTAAAGTCGACGTTATCCATACACTAGAATATGTT
AGCGAGGAATATGGTGGTCGAGTTGAGCTTGCAAAGAAATATTACGATCGGCTATCGAAA
TCCCTAGCAAAGAACTTCAATGGTACTGGACTCATATCCAGTATGCAACAATGTAATGAC
TTCTTCCTCCTAGGAACAAAACAAATCTCTATTGGAAGAGTTGGGGATGATTTTTGGTTC
CAAGATCCAAATGGTGACCCGAATGGAGTGTACTGGCTACAGGGTGTTCATATGATTCAT
TGTGCCTACAACAGTATGTGGATGGGTCAGATTATTCAACCAGACTGGGACATGTTCCAA
TCTGATCATGTCTGTGCTAAGTTCCATGCTGGCTCCAGGGCTATCTGTGGAGGACCTGTT
TATGTCAGTGACTCCTTGGGTGGCCATGATTTCGATCTTTTAACGAAGCTAGTTTACCCT
GATGGCACCATTCCCAAGTGCCAATATTTTGCACTCCCTACTAGAGACTGCATCTTCAAG
AATCCACTCTTTGATGGCAAAACCATACTCAAGATTTGGAATTTCAACAAGTATGGAGGA
GTCATTGGTGCATTCAATTGCCAAGGAGCAGGGTGGGATCCAAAGGAGAAAAGAATCAAG
GGATACTCAAATTGCTACAAGCCAATGAAAGGATCAGTCCATGTGAATGACATCGAATGG
GACCAACTTATCGAAGCATCTGAAATGGGCAAAGCAGAGGAATATGTTGTATATCTCAAC
CAAGCTGAGAAATTGTTGTTAACAAAGGCTACATCAGACACAACTCCAATGTCCCTTGAA
CCATCTACTTTCGAGATTTTTAGCTTTGTACCGATAAAACAGCTCAGCCCTATTGCTAAA
TTTGCTCCAATTGGACTCACTAACATGTTCAATAGTGGAGGAGCCATACAAGGAGTTCAA
TATGAGGAGGCTAATGGTGATGGTGCTAATTATGTAAGTGCAAAAGTTGAAGTTAAAGGT
GGTGGGAGTCTATTAGCATACACAAATGTGTTGCCTAACAAGTGTTACTTGAATGGTACT
GAAGTTGAGTTTGAGTGGTCTTCACAAGATGGCAAATTGATCATCAATCTTCCTTGGATT
GAAGAGGACAATGGCATTTCTAGTGTAACTTTTATTTTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015857
PEP Infomation

pacid=37440039 transcript=PGSC0003DMT400023280 locus=PGSC0003DMG400009017 ID=PGSC0003DMT400023280.v4.03 annot-version=v4.03
Sequence

MAPPNDPINSILNVMKTHKEDNFFELSNGKLFVKKVPLLFEVPSNVSFSSFSSICQTSSA
PLPLFHRAHSTSSKGGFLGFNKDDPSHHLMNSLGKFTCRNFLSIFRFKTWWSTQWVGNSG
SDLQMETQWVLLDVPEIKSYVIIIPIIEGKFRSALHPGIDGHVLICAESGSSQVKASSFG
AIAYVHVSDNPYTLMKEAYTSLRVYLNTFKLLEEKSVPSLVDKFGWCTWDAFYLTVEPTG
VWHGVKEFSQGGVSPRFLIIDDGWQSINFDHQEPHEDAKNLVLGGTQMTARLHRLDEGEK
FRKYKGGALLGPNPPLFDLNKPKILISKAIEIEHAEKARDKAIQSGVTDLSLFEIKIEKL
KKELDEMFGGDQENSLQLMCKDGEELEFNSEDSGMKAFTRDLRTHFKGLDDIYVWHALCG
AWGGVRPGTTHLNSKIIACKLSQGLDGTMDDLAVIKIVEGGIGLVHPDQADDFYDSMHSY
LSEVGITGVKVDVIHTLEYVSEEYGGRVELAKKYYDRLSKSLAKNFNGTGLISSMQQCND
FFLLGTKQISIGRVGDDFWFQDPNGDPNGVYWLQGVHMIHCAYNSMWMGQIIQPDWDMFQ
SDHVCAKFHAGSRAICGGPVYVSDSLGGHDFDLLTKLVYPDGTIPKCQYFALPTRDCIFK
NPLFDGKTILKIWNFNKYGGVIGAFNCQGAGWDPKEKRIKGYSNCYKPMKGSVHVNDIEW
DQLIEASEMGKAEEYVVYLNQAEKLLLTKATSDTTPMSLEPSTFEIFSFVPIKQLSPIAK
FAPIGLTNMFNSGGAIQGVQYEEANGDGANYVSAKVEVKGGGSLLAYTNVLPNKCYLNGT
EVEFEWSSQDGKLIINLPWIEEDNGISSVTFIF*

Transcript Sequence

Transcript ID

PGSC0003DMT400023280
Transcript Infomation

pacid=37440039 locus=PGSC0003DMG400009017 ID=PGSC0003DMT400023280.v4.03 annot-version=v4.03
Sequence

ATGGCACCACCAAATGATCCAATTAACTCAATTCTCAATGTAATGAAAACTCATAAAGAG
GACAACTTTTTTGAATTATCTAATGGAAAACTCTTTGTTAAGAAAGTTCCATTACTCTTT
GAAGTTCCAAGCAATGTTAGTTTCTCAAGCTTTTCATCAATTTGCCAAACATCCAGTGCT
CCACTTCCCCTGTTCCATCGCGCTCATTCAACGTCTTCCAAAGGCGGATTCTTGGGATTC
AACAAAGATGATCCATCTCATCACTTGATGAATTCCTTGGGGAAATTCACTTGCAGAAAT
TTCCTCAGCATTTTCAGGTTCAAGACTTGGTGGTCTACACAATGGGTAGGAAATTCTGGT
TCTGATTTGCAAATGGAAACTCAATGGGTACTCTTAGATGTCCCTGAGATAAAATCTTAT
GTGATTATTATACCAATAATTGAAGGGAAATTCAGGTCTGCACTTCACCCTGGCATAGAT
GGTCATGTTCTTATTTGTGCTGAGAGTGGTTCTAGCCAAGTGAAAGCATCATCCTTTGGC
GCTATCGCGTATGTTCATGTGTCTGATAATCCTTACACCCTGATGAAAGAAGCTTATACT
TCTCTTAGAGTTTATCTAAATACCTTTAAGCTCTTGGAAGAGAAATCAGTTCCATCCCTT
GTGGATAAATTTGGTTGGTGTACTTGGGATGCTTTTTACTTAACTGTTGAACCTACAGGG
GTTTGGCATGGAGTGAAAGAGTTTTCCCAAGGTGGGGTATCGCCGCGATTCCTTATTATT
GATGATGGTTGGCAAAGTATCAATTTTGATCATCAAGAACCTCATGAGGATGCGAAAAAT
TTGGTTCTTGGTGGAACTCAAATGACTGCCAGGCTTCATAGGCTTGATGAAGGTGAGAAA
TTCAGGAAGTACAAAGGTGGAGCCTTGTTAGGACCAAATCCTCCACTTTTTGACCTCAAT
AAGCCAAAGATACTAATCTCTAAGGCAATTGAGATTGAGCATGCAGAAAAGGCTCGCGAC
AAGGCGATTCAGTCTGGAGTTACTGACCTGTCATTGTTTGAAATAAAGATTGAGAAACTG
AAGAAGGAGTTGGATGAAATGTTTGGTGGGGACCAAGAAAACTCTCTTCAGCTCATGTGC
AAGGATGGTGAAGAATTGGAATTTAACTCCGAGGACTCGGGGATGAAAGCGTTTACCAGG
GATTTGAGAACACATTTCAAAGGCCTGGATGATATTTATGTATGGCATGCCTTGTGTGGT
GCTTGGGGTGGTGTAAGGCCTGGAACTACCCACCTGAATTCCAAGATCATCGCGTGTAAA
CTTTCTCAGGGCCTTGATGGGACAATGGATGATCTTGCAGTGATCAAAATAGTAGAAGGT
GGCATTGGACTTGTTCATCCTGATCAAGCTGATGATTTTTATGATTCAATGCATTCTTAC
CTCTCTGAAGTGGGAATTACAGGAGTTAAAGTCGACGTTATCCATACACTAGAATATGTT
AGCGAGGAATATGGTGGTCGAGTTGAGCTTGCAAAGAAATATTACGATCGGCTATCGAAA
TCCCTAGCAAAGAACTTCAATGGTACTGGACTCATATCCAGTATGCAACAATGTAATGAC
TTCTTCCTCCTAGGAACAAAACAAATCTCTATTGGAAGAGTTGGGGATGATTTTTGGTTC
CAAGATCCAAATGGTGACCCGAATGGAGTGTACTGGCTACAGGGTGTTCATATGATTCAT
TGTGCCTACAACAGTATGTGGATGGGTCAGATTATTCAACCAGACTGGGACATGTTCCAA
TCTGATCATGTCTGTGCTAAGTTCCATGCTGGCTCCAGGGCTATCTGTGGAGGACCTGTT
TATGTCAGTGACTCCTTGGGTGGCCATGATTTCGATCTTTTAACGAAGCTAGTTTACCCT
GATGGCACCATTCCCAAGTGCCAATATTTTGCACTCCCTACTAGAGACTGCATCTTCAAG
AATCCACTCTTTGATGGCAAAACCATACTCAAGATTTGGAATTTCAACAAGTATGGAGGA
GTCATTGGTGCATTCAATTGCCAAGGAGCAGGGTGGGATCCAAAGGAGAAAAGAATCAAG
GGATACTCAAATTGCTACAAGCCAATGAAAGGATCAGTCCATGTGAATGACATCGAATGG
GACCAACTTATCGAAGCATCTGAAATGGGCAAAGCAGAGGAATATGTTGTATATCTCAAC
CAAGCTGAGAAATTGTTGTTAACAAAGGCTACATCAGACACAACTCCAATGTCCCTTGAA
CCATCTACTTTCGAGATTTTTAGCTTTGTACCGATAAAACAGCTCAGCCCTATTGCTAAA
TTTGCTCCAATTGGACTCACTAACATGTTCAATAGTGGAGGAGCCATACAAGGAGTTCAA
TATGAGGAGGCTAATGGTGATGGTGCTAATTATGTAAGTGCAAAAGTTGAAGTTAAAGGT
GGTGGGAGTCTATTAGCATACACAAATGTGTTGCCTAACAAGTGTTACTTGAATGGTACT
GAAGTTGAGTTTGAGTGGTCTTCACAAGATGGCAAATTGATCATCAATCTTCCTTGGATT
GAAGAGGACAATGGCATTTCTAGTGTAACTTTTATTTTTTAG