Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023279
CDS Infomation

pacid=37438484 polypeptide=PGSC0003DMP400015856 locus=PGSC0003DMG400009016 ID=PGSC0003DMT400023279.v4.03 annot-version=v4.03
Sequence

ATGATCCGGAATTTGACCCGTCAGATTTCAAACGAGACCCGACTGAACCTCAGAAGACTA
TGTTTCACGGCGGCGGAGCAGAGTGGAAGAGATTCGAGGCTCTACCGGAGATTGTCGGCT
TTAGGAGCCACAAAAGGGTCGGTTACTGAAACAATAAATGCGTATACGAGAGAAGGCAGA
GTTGTGAAGAAGTATGAACTGGAAAAATGCATCAAGGAGCTTCGCAAATATAAAAGATAC
CAGCATGCTCTTGAGATAATGGAGTGGATGGAGAAAAGAGGTATAAACTTTTCGTATGGT
GATTATGGAGTACGATTGGATCTCATAGCAAAAGTTCAAGGAATAACTGCAGCTGAAAAA
TACTTTGGCGGCCTCTCACCCTCCATGCAGAATCAAAGCACTTATGGAGCACTCTTGAAT
TGCTACTGTGTTGAAAAAATGGCAGACAAGGCGTTATCCTTCTTTGAGAAAATGGATCAA
TTGAAGTTCACAAATAAATCATTGGCATTCAACAATCTTATGTCGTTATATATGAGACTA
GGGCAACCAGAAAAAGTTGCCCCTTTGGTACAGGAAATGAAGAGCAGAAAGGTTCCGCTA
TGCACATTTTCATATAATATCTGGATGAATAGCTATTCTTGTTTAGATGATATAGAAGGA
GTGGAAAGGGTCTTCGAAGAGCTAAAACAGGAGAATGCAAAGGAGTGTGATTGGACTACA
TATAGTAACTTGGCTGTTGCCTATGTTAAGGCTGGGCATAACGAAAAAGCTGAGTTAGCT
CTAAAGAAGCTTGAGGAAGAGATGGGACCTCGTAATCGTCAGGCTTACCACTATTTGATT
AGTTTGCACGCCAGAATATCTAATCTAGGTGAGGTTTATCGTATTTGGGGTTCTCTAAAG
AGTTCCTTGGATCTAACCAATTCTAGTTATCTTGTCATGCTTCAGTCCCTTAGTAAGCAT
AACGACATGGATGGTTTAAAGAAATACTACGAGGAATGGGAATCAAGCTGCTCTACTTAT
GATATGAGGCTGGCAAATAATGTCATTGGAGCTTATCTGAGACATGACATGTTAAACAAT
GCAGAGAAAGTCTTCCATAGTGCTTTGAAGAGATCACAAGGACCTTTCTTCTTGGCTTGG
GAAATGTTCATGCTTTTCTATTTGAGGAAGCGTCAAATCAATTTTGCTCAACAGTGCATG
GAAGCAATTGCCTCTCGGATAAAGGAAAACAAATGGCGACCAAAATATGAAACCATAAGT
AATTTTCTCGAGTATTTTGTTGAAGAAAAAGATGTTGATGGTGCTGAGGATTTCTACAAG
TTTCTGAAGAAGGTAAATTGCCTTAGTAGTGATGTTTATAGTTCATTGCTTCGCACTTAT
GCAGCTGCCAACAGAACAACAGACGATATGAGACTGAGAATTAAGGAAGATGGTATTGAA
ATGAGTTGTGAGCTTGAAGAATTGCTTAAAAGTGTTTGTCCTGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400015856
PEP Infomation

pacid=37438484 transcript=PGSC0003DMT400023279 locus=PGSC0003DMG400009016 ID=PGSC0003DMT400023279.v4.03 annot-version=v4.03
Sequence

MIRNLTRQISNETRLNLRRLCFTAAEQSGRDSRLYRRLSALGATKGSVTETINAYTREGR
VVKKYELEKCIKELRKYKRYQHALEIMEWMEKRGINFSYGDYGVRLDLIAKVQGITAAEK
YFGGLSPSMQNQSTYGALLNCYCVEKMADKALSFFEKMDQLKFTNKSLAFNNLMSLYMRL
GQPEKVAPLVQEMKSRKVPLCTFSYNIWMNSYSCLDDIEGVERVFEELKQENAKECDWTT
YSNLAVAYVKAGHNEKAELALKKLEEEMGPRNRQAYHYLISLHARISNLGEVYRIWGSLK
SSLDLTNSSYLVMLQSLSKHNDMDGLKKYYEEWESSCSTYDMRLANNVIGAYLRHDMLNN
AEKVFHSALKRSQGPFFLAWEMFMLFYLRKRQINFAQQCMEAIASRIKENKWRPKYETIS
NFLEYFVEEKDVDGAEDFYKFLKKVNCLSSDVYSSLLRTYAAANRTTDDMRLRIKEDGIE
MSCELEELLKSVCPE*

Transcript Sequence

Transcript ID

PGSC0003DMT400023279
Transcript Infomation

pacid=37438484 locus=PGSC0003DMG400009016 ID=PGSC0003DMT400023279.v4.03 annot-version=v4.03
Sequence

ATGATCCGGAATTTGACCCGTCAGATTTCAAACGAGACCCGACTGAACCTCAGAAGACTA
TGTTTCACGGCGGCGGAGCAGAGTGGAAGAGATTCGAGGCTCTACCGGAGATTGTCGGCT
TTAGGAGCCACAAAAGGGTCGGTTACTGAAACAATAAATGCGTATACGAGAGAAGGCAGA
GTTGTGAAGAAGTATGAACTGGAAAAATGCATCAAGGAGCTTCGCAAATATAAAAGATAC
CAGCATGCTCTTGAGATAATGGAGTGGATGGAGAAAAGAGGTATAAACTTTTCGTATGGT
GATTATGGAGTACGATTGGATCTCATAGCAAAAGTTCAAGGAATAACTGCAGCTGAAAAA
TACTTTGGCGGCCTCTCACCCTCCATGCAGAATCAAAGCACTTATGGAGCACTCTTGAAT
TGCTACTGTGTTGAAAAAATGGCAGACAAGGCGTTATCCTTCTTTGAGAAAATGGATCAA
TTGAAGTTCACAAATAAATCATTGGCATTCAACAATCTTATGTCGTTATATATGAGACTA
GGGCAACCAGAAAAAGTTGCCCCTTTGGTACAGGAAATGAAGAGCAGAAAGGTTCCGCTA
TGCACATTTTCATATAATATCTGGATGAATAGCTATTCTTGTTTAGATGATATAGAAGGA
GTGGAAAGGGTCTTCGAAGAGCTAAAACAGGAGAATGCAAAGGAGTGTGATTGGACTACA
TATAGTAACTTGGCTGTTGCCTATGTTAAGGCTGGGCATAACGAAAAAGCTGAGTTAGCT
CTAAAGAAGCTTGAGGAAGAGATGGGACCTCGTAATCGTCAGGCTTACCACTATTTGATT
AGTTTGCACGCCAGAATATCTAATCTAGGTGAGGTTTATCGTATTTGGGGTTCTCTAAAG
AGTTCCTTGGATCTAACCAATTCTAGTTATCTTGTCATGCTTCAGTCCCTTAGTAAGCAT
AACGACATGGATGGTTTAAAGAAATACTACGAGGAATGGGAATCAAGCTGCTCTACTTAT
GATATGAGGCTGGCAAATAATGTCATTGGAGCTTATCTGAGACATGACATGTTAAACAAT
GCAGAGAAAGTCTTCCATAGTGCTTTGAAGAGATCACAAGGACCTTTCTTCTTGGCTTGG
GAAATGTTCATGCTTTTCTATTTGAGGAAGCGTCAAATCAATTTTGCTCAACAGTGCATG
GAAGCAATTGCCTCTCGGATAAAGGAAAACAAATGGCGACCAAAATATGAAACCATAAGT
AATTTTCTCGAGTATTTTGTTGAAGAAAAAGATGTTGATGGTGCTGAGGATTTCTACAAG
TTTCTGAAGAAGGTAAATTGCCTTAGTAGTGATGTTTATAGTTCATTGCTTCGCACTTAT
GCAGCTGCCAACAGAACAACAGACGATATGAGACTGAGAATTAAGGAAGATGGTATTGAA
ATGAGTTGTGAGCTTGAAGAATTGCTTAAAAGTGTTTGTCCTGAATAA