Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023277
CDS Infomation

pacid=37438136 polypeptide=PGSC0003DMP400015854 locus=PGSC0003DMG400009015 ID=PGSC0003DMT400023277.v4.03 annot-version=v4.03
Sequence

ATGTCGAAGAGAAAATTCGGATTCGAAGGATTTGGCATTAATCGGCAAACAACGTACAAC
TTCGAGCGAAATCAAGCTCCTCAGCGACTGTATGTTCCGCCATCCTCACGTTCCGGAGGT
AGCCATGACAATTACGAAGATACCGACTTAGATAACATTGAGTACGATGACCACGAAGCT
GTCGGAGGGAACAACGATGATGGAGGCGGAGGAGGTGGTGAGGATGATGAAATTGATCCA
CTTGATGCGTTTATGGAAGGGATTCATGAAGAAATGAAGGCTGCACCGCCTCCTAAGCCG
AAAGAGAAGTTGGATAAGTATAAGGATGATGTAGATGATGATCCGATGGAGAGTTTTCTG
AGAGCGAAGAAGGATGTAGGGTTACAATTGGCTGCTGATGCTCTTCACGCTGGTTATAAT
TCCGACGAGGAGGTGTATGCTGCAGCAAAGGCGGTTGATGCAGGGTTAGTTGAGTATGAC
TCCGACGATAATCCAATTGTTGTTGATAAAAAGAAGATTGAGCCTATTACTGCTCTGGAT
CATAGTGAGATTGACTATGAGCCTTTCAACAAGGATTTTTATGAGGAAAAGCCTTCTATT
TCAGGTATGAGCGATCAGGAAGTTAATGAATATAGTACAAGCTTGGCCATTCGTGTATCG
GGCTTTGATGTACCAAGGCCAATTAAGACATTTGAAGACTCTGGTTTTTCTGTTGAGTTG
ATGAAAGCTATCAGTAAACAGGGTTATGAAAAGCCTACACCAATACAGTGTCAAGCATTA
CCAATTGTGCTCTCTGGGAGAGATATTATTGGTATTGCTAAAACTGGGTCCGGTAAGACT
GCTGCTTTTGTGCTTCCTATGATTGTCCACATCATGGATCAGCCTGAACTGCAGAAAGAA
GAAGGCCCCATTGGAGTTATTTGTGCACCCACTAGGGAATTAGCACATCAAATATTTGTG
GAGGCAAAGAAATTTTCGAAATCGCATGGTATCCGTGTGTCTGCAGTTTATGGAGGAATG
TCTAAATTGGATCAATACAAAGAACTAAAGGCAGGGTGTGAGATTGTTGTTGCTACTCCA
GGGAGGTTGATAGATATGATCAGAAAGAAGGCATTTACAATGTTGAGAGCAACTTATCTA
GTGCTTGATGAGGCTGATCGGATGTTTGACCTTGGTTTCGAGCCTCAGATAAGGTCCATT
GTTGGTCAAATTAGACCTGATCGCCAAACATTGCTCTTTTCAGCAACTATGCCCCGCAAA
GTTGAGAAGCTTGCCAGAGAAATATTGACGGATCCTGTAAGAGTTACTGTGGGTGAGATT
GGCACGGCTAATGAGGATATTACACAAATAGTTGAAGTGATTCCTTCGGATGCTGAAAAA
TTGCCTTGGCTTCTGGAGAAGCTCCCTGGACTGATTGACAATGGTGATGTTCTTGTCTTT
GCTTCGAAAAAGGCAACAGTGGATGAGATTGAATCCCAATTGGCTCAGAAGGGATTTAGA
GTTGCAGCTCTCCATGGTGACAAGGATCAAGTTTCTCGTACGGAGACGCTGCAAAAATTT
AAATCTGGCATATATCATGTTCTCATCGCAACTGATGTTGCTGCTCGTGGTCTTGATATC
AAATCACTTAAGTCAGTGGTGAACTATGATATAGCTAAAGATATGGACATGCATGTTCAC
AGAATTGGGAGAACAGGTCGTGCTGGTGACAAAGATGGAACGGCCTACACTCTTATTACT
CACAAGGAAGCACGTTTTGCTGGTGAACTGGCGAACAGTTTGGTTGCTGCTGGTCAAACT
GTGTCCGTGGAACTAATGGACCTTGCTATGAAGGATGGAAGGTTTCGGTCCAAAAGGGAT
GCAAGGAAAGGAGGTGGAAAAAGGGCCAAAGGAAGGGGAGGAGGAAACAATAAAGGTGTA
CGAGGTGTGGATTTTGGTCTAGGGATTGGATACAATCCTGAATCAAATAACCCTCCCCAG
AGCGCTGCTCCAAGCCGTTCTGCAGCTGTTAATTCCCTGAGGACAGGAATGATGGCACAA
TTTAAAAGTAGCTTTGTTGCTGCATCATCAAAGTCTCAAAATCAAGGGATGAATAACACA
GAGGGCACGTTTCCCAACAAGAAAATGGTCTTGCAAGGCTTTGTCTCTGGTGGGACTATA
GGTGGAAATAGTAATACTTCCCATAATAGTTCCACATTTACTGCTGCAACATCTGGGGCA
TATACTTCTAGTCAGCCAGCTAGAGATGGAGCTAACCAGAAAAGTTCAGAGAGTTCAAAG
GAGAAGTCCAGAGAAAGACGGAGGCCTTCTGGTTGGGATCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015854
PEP Infomation

pacid=37438136 transcript=PGSC0003DMT400023277 locus=PGSC0003DMG400009015 ID=PGSC0003DMT400023277.v4.03 annot-version=v4.03
Sequence

MSKRKFGFEGFGINRQTTYNFERNQAPQRLYVPPSSRSGGSHDNYEDTDLDNIEYDDHEA
VGGNNDDGGGGGGEDDEIDPLDAFMEGIHEEMKAAPPPKPKEKLDKYKDDVDDDPMESFL
RAKKDVGLQLAADALHAGYNSDEEVYAAAKAVDAGLVEYDSDDNPIVVDKKKIEPITALD
HSEIDYEPFNKDFYEEKPSISGMSDQEVNEYSTSLAIRVSGFDVPRPIKTFEDSGFSVEL
MKAISKQGYEKPTPIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKE
EGPIGVICAPTRELAHQIFVEAKKFSKSHGIRVSAVYGGMSKLDQYKELKAGCEIVVATP
GRLIDMIRKKAFTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRK
VEKLAREILTDPVRVTVGEIGTANEDITQIVEVIPSDAEKLPWLLEKLPGLIDNGDVLVF
ASKKATVDEIESQLAQKGFRVAALHGDKDQVSRTETLQKFKSGIYHVLIATDVAARGLDI
KSLKSVVNYDIAKDMDMHVHRIGRTGRAGDKDGTAYTLITHKEARFAGELANSLVAAGQT
VSVELMDLAMKDGRFRSKRDARKGGGKRAKGRGGGNNKGVRGVDFGLGIGYNPESNNPPQ
SAAPSRSAAVNSLRTGMMAQFKSSFVAASSKSQNQGMNNTEGTFPNKKMVLQGFVSGGTI
GGNSNTSHNSSTFTAATSGAYTSSQPARDGANQKSSESSKEKSRERRRPSGWDR*

Transcript Sequence

Transcript ID

PGSC0003DMT400023277
Transcript Infomation

pacid=37438136 locus=PGSC0003DMG400009015 ID=PGSC0003DMT400023277.v4.03 annot-version=v4.03
Sequence

ATGTCGAAGAGAAAATTCGGATTCGAAGGATTTGGCATTAATCGGCAAACAACGTACAAC
TTCGAGCGAAATCAAGCTCCTCAGCGACTGTATGTTCCGCCATCCTCACGTTCCGGAGGT
AGCCATGACAATTACGAAGATACCGACTTAGATAACATTGAGTACGATGACCACGAAGCT
GTCGGAGGGAACAACGATGATGGAGGCGGAGGAGGTGGTGAGGATGATGAAATTGATCCA
CTTGATGCGTTTATGGAAGGGATTCATGAAGAAATGAAGGCTGCACCGCCTCCTAAGCCG
AAAGAGAAGTTGGATAAGTATAAGGATGATGTAGATGATGATCCGATGGAGAGTTTTCTG
AGAGCGAAGAAGGATGTAGGGTTACAATTGGCTGCTGATGCTCTTCACGCTGGTTATAAT
TCCGACGAGGAGGTGTATGCTGCAGCAAAGGCGGTTGATGCAGGGTTAGTTGAGTATGAC
TCCGACGATAATCCAATTGTTGTTGATAAAAAGAAGATTGAGCCTATTACTGCTCTGGAT
CATAGTGAGATTGACTATGAGCCTTTCAACAAGGATTTTTATGAGGAAAAGCCTTCTATT
TCAGGTATGAGCGATCAGGAAGTTAATGAATATAGTACAAGCTTGGCCATTCGTGTATCG
GGCTTTGATGTACCAAGGCCAATTAAGACATTTGAAGACTCTGGTTTTTCTGTTGAGTTG
ATGAAAGCTATCAGTAAACAGGGTTATGAAAAGCCTACACCAATACAGTGTCAAGCATTA
CCAATTGTGCTCTCTGGGAGAGATATTATTGGTATTGCTAAAACTGGGTCCGGTAAGACT
GCTGCTTTTGTGCTTCCTATGATTGTCCACATCATGGATCAGCCTGAACTGCAGAAAGAA
GAAGGCCCCATTGGAGTTATTTGTGCACCCACTAGGGAATTAGCACATCAAATATTTGTG
GAGGCAAAGAAATTTTCGAAATCGCATGGTATCCGTGTGTCTGCAGTTTATGGAGGAATG
TCTAAATTGGATCAATACAAAGAACTAAAGGCAGGGTGTGAGATTGTTGTTGCTACTCCA
GGGAGGTTGATAGATATGATCAGAAAGAAGGCATTTACAATGTTGAGAGCAACTTATCTA
GTGCTTGATGAGGCTGATCGGATGTTTGACCTTGGTTTCGAGCCTCAGATAAGGTCCATT
GTTGGTCAAATTAGACCTGATCGCCAAACATTGCTCTTTTCAGCAACTATGCCCCGCAAA
GTTGAGAAGCTTGCCAGAGAAATATTGACGGATCCTGTAAGAGTTACTGTGGGTGAGATT
GGCACGGCTAATGAGGATATTACACAAATAGTTGAAGTGATTCCTTCGGATGCTGAAAAA
TTGCCTTGGCTTCTGGAGAAGCTCCCTGGACTGATTGACAATGGTGATGTTCTTGTCTTT
GCTTCGAAAAAGGCAACAGTGGATGAGATTGAATCCCAATTGGCTCAGAAGGGATTTAGA
GTTGCAGCTCTCCATGGTGACAAGGATCAAGTTTCTCGTACGGAGACGCTGCAAAAATTT
AAATCTGGCATATATCATGTTCTCATCGCAACTGATGTTGCTGCTCGTGGTCTTGATATC
AAATCACTTAAGTCAGTGGTGAACTATGATATAGCTAAAGATATGGACATGCATGTTCAC
AGAATTGGGAGAACAGGTCGTGCTGGTGACAAAGATGGAACGGCCTACACTCTTATTACT
CACAAGGAAGCACGTTTTGCTGGTGAACTGGCGAACAGTTTGGTTGCTGCTGGTCAAACT
GTGTCCGTGGAACTAATGGACCTTGCTATGAAGGATGGAAGGTTTCGGTCCAAAAGGGAT
GCAAGGAAAGGAGGTGGAAAAAGGGCCAAAGGAAGGGGAGGAGGAAACAATAAAGGTGTA
CGAGGTGTGGATTTTGGTCTAGGGATTGGATACAATCCTGAATCAAATAACCCTCCCCAG
AGCGCTGCTCCAAGCCGTTCTGCAGCTGTTAATTCCCTGAGGACAGGAATGATGGCACAA
TTTAAAAGTAGCTTTGTTGCTGCATCATCAAAGTCTCAAAATCAAGGGATGAATAACACA
GAGGGCACGTTTCCCAACAAGAAAATGGTCTTGCAAGGCTTTGTCTCTGGTGGGACTATA
GGTGGAAATAGTAATACTTCCCATAATAGTTCCACATTTACTGCTGCAACATCTGGGGCA
TATACTTCTAGTCAGCCAGCTAGAGATGGAGCTAACCAGAAAAGTTCAGAGAGTTCAAAG
GAGAAGTCCAGAGAAAGACGGAGGCCTTCTGGTTGGGATCGTTGA