Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023253
CDS Infomation

pacid=37439921 polypeptide=PGSC0003DMP400015837 locus=PGSC0003DMG400009006 ID=PGSC0003DMT400023253.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAAGCGAGCAAGATATGTTATACGATCCTTCTAAAATCTTCATCGGTGTCCGT
TTTGTTCTTGCTGGGTTCGATTCCCCGAAGAAAGAACAGGTCCGGTCCAAGCTTTTGGAG
GCTGGTGGAGTTGACGTGAACGAATATGGCCCGGATTGCACTCACCTCATTGTTGATAGA
ACAGTTTATGATGATCCTCTGTGTGTTGCTGCCCGACAAGATGGAAAAATTTTAGTCTCT
GGCTTGTGGGTTGAACACAGTTTTGATGTGGGAATGCCTGTCGATCACCTCTCTATTATG
TACAGACCTCCAAGGGATTTGACTGGAATCCCAGGTGCTAAATCACTAATACTGTGCTTA
ACTGGATATCAGCGGCAAGACCGAGATGATATTATGATAATGGTTGGGCTGATGGGTGCA
AACTTTTCAAAGCCATTGGTTGCAAACAAAGTCACTCATCTTATTTGCTACAAATTTGAG
GGAGAGAAATACGAGCTTGCCAAGAAAATGAAGAAGATAAAACTAGTGAATCACCTGTGG
CTAGAAGATTGTTTAAGGGCCTGGGAAATTCTTCCGGAGGCTAGCTATGATAAAAGTGGG
TATGAGTTGGAGATGATGGAAACCGAAGCCAAGGATTCTGAAGATGAACAAGACGATATT
GCTGCAATTGGCAGAGAGAGAGTTTCTTTCACTAGTCCTCAACACTCAAAGAGTCCCAAT
CAATTCCTCTTGAAGGAGGAAATCTCTAGAAACATCTCAGAGATACACATACAGACAGGT
CTGTCAGAACTTGGAAACAATAAGCATCTGGGATTATCTGCTTCAAAGGAATCGAAACCG
GACCTGGTTACAACCTTTGAGGGATCTGACAAGCGACATCTTGAGACCCTTGGCACCACT
GTGAGTAGAAATGAAGATGTGCCACAAAATGGAAATAGTCCGACTTCAGTTTCTAATAAT
GCTAGGAAGTCTCCTAAATCTTGTTTGTCGAACAGTTGTGTTAAAAGTTATTCCCGAGAA
AAACCTAGAAAAATTAATCTCATCATTGCCACAGAACAAGTTGAGAGTGCAGGATGTCCT
CCCGCTAATGCGGTGAGTCAACATTGTGATAACTTGAACATCTCCTCAGAGAAAGAGCAG
AATGAAGCAGAAGTTGGTTCTGCAAACTTTCCTACAAGTAATATGTCATGCCTGGAAATG
GGCCAAAGTGGTGTACTCCATGAGAAAAGGAGGGTGGACATGTTATATAACGGCTCTCTG
GAAACTAGTCATAATCCAGAAAGCATGTTAGATGGTGGCCTGGGTGTTGAAAGTTATTCC
CTGAAAAAACCTAGAAAAATTGGTCTCACCATGGCCTTGAAACAAATTGAGAGTGCAGGA
TGTCCTCCCCCTAATATAGTGAGCCAACATTGTGATAAATTGAACATTTCCTCAGAGAAA
GAGCAGGACGGAACTGTAGTTAGTTCTGCAAAAATTCCTACAAGTAAAATGTCATGCCTT
GAAAAGGGCCAAAGTGGTGTACTACCTGAGAAATGGAAGGTTGAGTTACATAAAAGCTCT
CCAACAACTAGTCATAATCCAGAAAGCATGGTAGATAGTGACCTGGTGGAAGATCGTGGT
GAAGAGTTGGACAGACATTTGTCATTGCGCAACAATATCCAGTTTGGCAAGGGTGCAAGT
CTTCATCCCTTGCAGAAATGTGATTCTTCTATTTTCACTTCCATAATACAAGAAAATCAG
CAAGAGTGTGATGAGGAGGCATTGCAAGCTGGCACTTGTGCAGTCATGGGGTTAAGAAAG
ACTGCTTTGAGCAGCAATTTGGACCCTGTTAATGTTCACTCATGTGATACTGAGCATTCT
ACTGGTGAACATAACAGCCCGAGGAATGAACTGCAAGCTGTCAAAAATCCATCTCCTGGC
AATGAAAGAGAAGATGTTGAGAAGTTTATTCGGATGGCCGAATTGGAAAATGCCGTAGGA
AATACTAGGTCAGGGTCTAAGCCATTAAAGATAAAAACCCTTCCCAAGAAGACACTGGGA
TCTGGACTAAGTCTCTGTGAAAGGGATGCAAGAAATCAGGAAGGTACTACATTTCATAAC
AAGACTGTTCCATCAAATGACTCTGCCCCTTCTGTGAGCTGGGGCAGAAAGGACAGAGAT
CACCAAGAGGTTCTCAGCTTTGCAAAGGTTGAGATTCCACCAGCAGGTAGTGCAGAATTA
AGCAAAGAAACAGAGAAAAGAAAGTACTTGGATTCTGGAAAGGAAGATGTTGAAATAGCT
GAATCCATAAATAATGATGCTGAAACTTCAGAGAGCAAAGAGTATGATGAGTTGAATGTC
TTAACAGGTGAAGTCAGTGGAGTACCGCAGTTTCTGGTTACATCTGCAGAGGAACTTGTG
GTGAACGTGGATGGGACTGATGTGGAAGATTGTGCTGTGAGGCATGATGCTGACAACAAG
AACTCTGAAGCTCAAAAGACTATTTCTGGCAAGGACACCAGGTCAAATAAATCAACTTCT
GCAGAGAATGATGTAGATGTGAAAATAACCAAAGGCCCAAAATATTTAATGAAGAGGTCA
AACACAACTAATATAGCTGCTAAAAGAGCTGTAATTTCCCGAAAAGTTGCCAAAAAGAAG
AAGTCCGAAAATGACAAAAAGAAGAATGAGGAAACAGAGAATGAAAAAGGTTTACCTGTA
CCAGGTGAACAAACAGTACTGGCACTTGATCATGAGTTGAACTCCATGGATGTGGAGAAG
GAGAATAGTCCTCTTATTGATGACCAAAGCACGAGATATAATGAACATGGAGCTGGCAAA
AGTTCTCCAAAATGTGATAACAAAAAACCTCTAAAGGCTGATGTTGCAAATCCTCGCTCA
TTGCAGGTTACTAAAGTAGGAACTGAGCAAAGGTGGTTTATCCTTAGTGGGCATCGACTG
CTAAGAAAGGAATTTGAGAAGGTCATCAAACGTTTGAAAGGACATGTGTGCAGAGATTCT
CATCAATGGTCATATCAAGCAACTCATTTCATTGTTCCTGATCTAGTTCGCAGAACTGAA
AAATTGTTTGCTGCTGCAGCCTCTGGAAGGTGGATCCTAAAGTCTGATTATTTAACAGCT
AGCAATGAAGCTGGAAGACTCTTGGATGAAGAAAAATATGAATGGCACAAAAAGGGCTTA
ACAGAAGATTTAGCAATCGACTTAGAAGCTCCAAGGAAGTGGCGGCTTCTGAGGGAGAGA
ACTGGACATGGTGCATTTTATGGAATGAAGATAATCATTTATGGAGACTGCATTGTACCA
CCATTGGATACACTGAAGCGCGCTGTCAAGGCTGGAGATGGTACTATATTAGCAACTTCA
CCTCCTTACACTCGCTTCCTTAACTCAGGTATCGATTTTGCTGTTGTCGATGAGACCATG
CCCCATTATGATAAGTGGGTTCAAGAATTCCTAAGGTGTGAGATACCTTGCATTTTGGCT
GATTACTTGGTGGCTTATGTGTGCAAGCCGGGTTATCCTTGTGACAGTTATGTACAATAC
AATACTCATACTTGGGTAGAAAGGTCATTGAAAAACCTTGAAGATCGCTTGGAAGAAGTT
GTTGTGGATATGGTGCCATCAGATGACAACAGTAAGATAGAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015837
PEP Infomation

pacid=37439921 transcript=PGSC0003DMT400023253 locus=PGSC0003DMG400009006 ID=PGSC0003DMT400023253.v4.03 annot-version=v4.03
Sequence

MAESEQDMLYDPSKIFIGVRFVLAGFDSPKKEQVRSKLLEAGGVDVNEYGPDCTHLIVDR
TVYDDPLCVAARQDGKILVSGLWVEHSFDVGMPVDHLSIMYRPPRDLTGIPGAKSLILCL
TGYQRQDRDDIMIMVGLMGANFSKPLVANKVTHLICYKFEGEKYELAKKMKKIKLVNHLW
LEDCLRAWEILPEASYDKSGYELEMMETEAKDSEDEQDDIAAIGRERVSFTSPQHSKSPN
QFLLKEEISRNISEIHIQTGLSELGNNKHLGLSASKESKPDLVTTFEGSDKRHLETLGTT
VSRNEDVPQNGNSPTSVSNNARKSPKSCLSNSCVKSYSREKPRKINLIIATEQVESAGCP
PANAVSQHCDNLNISSEKEQNEAEVGSANFPTSNMSCLEMGQSGVLHEKRRVDMLYNGSL
ETSHNPESMLDGGLGVESYSLKKPRKIGLTMALKQIESAGCPPPNIVSQHCDKLNISSEK
EQDGTVVSSAKIPTSKMSCLEKGQSGVLPEKWKVELHKSSPTTSHNPESMVDSDLVEDRG
EELDRHLSLRNNIQFGKGASLHPLQKCDSSIFTSIIQENQQECDEEALQAGTCAVMGLRK
TALSSNLDPVNVHSCDTEHSTGEHNSPRNELQAVKNPSPGNEREDVEKFIRMAELENAVG
NTRSGSKPLKIKTLPKKTLGSGLSLCERDARNQEGTTFHNKTVPSNDSAPSVSWGRKDRD
HQEVLSFAKVEIPPAGSAELSKETEKRKYLDSGKEDVEIAESINNDAETSESKEYDELNV
LTGEVSGVPQFLVTSAEELVVNVDGTDVEDCAVRHDADNKNSEAQKTISGKDTRSNKSTS
AENDVDVKITKGPKYLMKRSNTTNIAAKRAVISRKVAKKKKSENDKKKNEETENEKGLPV
PGEQTVLALDHELNSMDVEKENSPLIDDQSTRYNEHGAGKSSPKCDNKKPLKADVANPRS
LQVTKVGTEQRWFILSGHRLLRKEFEKVIKRLKGHVCRDSHQWSYQATHFIVPDLVRRTE
KLFAAAASGRWILKSDYLTASNEAGRLLDEEKYEWHKKGLTEDLAIDLEAPRKWRLLRER
TGHGAFYGMKIIIYGDCIVPPLDTLKRAVKAGDGTILATSPPYTRFLNSGIDFAVVDETM
PHYDKWVQEFLRCEIPCILADYLVAYVCKPGYPCDSYVQYNTHTWVERSLKNLEDRLEEV
VVDMVPSDDNSKIE*

Transcript Sequence

Transcript ID

PGSC0003DMT400023253
Transcript Infomation

pacid=37439921 locus=PGSC0003DMG400009006 ID=PGSC0003DMT400023253.v4.03 annot-version=v4.03
Sequence

ATGGCAGAAAGCGAGCAAGATATGTTATACGATCCTTCTAAAATCTTCATCGGTGTCCGT
TTTGTTCTTGCTGGGTTCGATTCCCCGAAGAAAGAACAGGTCCGGTCCAAGCTTTTGGAG
GCTGGTGGAGTTGACGTGAACGAATATGGCCCGGATTGCACTCACCTCATTGTTGATAGA
ACAGTTTATGATGATCCTCTGTGTGTTGCTGCCCGACAAGATGGAAAAATTTTAGTCTCT
GGCTTGTGGGTTGAACACAGTTTTGATGTGGGAATGCCTGTCGATCACCTCTCTATTATG
TACAGACCTCCAAGGGATTTGACTGGAATCCCAGGTGCTAAATCACTAATACTGTGCTTA
ACTGGATATCAGCGGCAAGACCGAGATGATATTATGATAATGGTTGGGCTGATGGGTGCA
AACTTTTCAAAGCCATTGGTTGCAAACAAAGTCACTCATCTTATTTGCTACAAATTTGAG
GGAGAGAAATACGAGCTTGCCAAGAAAATGAAGAAGATAAAACTAGTGAATCACCTGTGG
CTAGAAGATTGTTTAAGGGCCTGGGAAATTCTTCCGGAGGCTAGCTATGATAAAAGTGGG
TATGAGTTGGAGATGATGGAAACCGAAGCCAAGGATTCTGAAGATGAACAAGACGATATT
GCTGCAATTGGCAGAGAGAGAGTTTCTTTCACTAGTCCTCAACACTCAAAGAGTCCCAAT
CAATTCCTCTTGAAGGAGGAAATCTCTAGAAACATCTCAGAGATACACATACAGACAGGT
CTGTCAGAACTTGGAAACAATAAGCATCTGGGATTATCTGCTTCAAAGGAATCGAAACCG
GACCTGGTTACAACCTTTGAGGGATCTGACAAGCGACATCTTGAGACCCTTGGCACCACT
GTGAGTAGAAATGAAGATGTGCCACAAAATGGAAATAGTCCGACTTCAGTTTCTAATAAT
GCTAGGAAGTCTCCTAAATCTTGTTTGTCGAACAGTTGTGTTAAAAGTTATTCCCGAGAA
AAACCTAGAAAAATTAATCTCATCATTGCCACAGAACAAGTTGAGAGTGCAGGATGTCCT
CCCGCTAATGCGGTGAGTCAACATTGTGATAACTTGAACATCTCCTCAGAGAAAGAGCAG
AATGAAGCAGAAGTTGGTTCTGCAAACTTTCCTACAAGTAATATGTCATGCCTGGAAATG
GGCCAAAGTGGTGTACTCCATGAGAAAAGGAGGGTGGACATGTTATATAACGGCTCTCTG
GAAACTAGTCATAATCCAGAAAGCATGTTAGATGGTGGCCTGGGTGTTGAAAGTTATTCC
CTGAAAAAACCTAGAAAAATTGGTCTCACCATGGCCTTGAAACAAATTGAGAGTGCAGGA
TGTCCTCCCCCTAATATAGTGAGCCAACATTGTGATAAATTGAACATTTCCTCAGAGAAA
GAGCAGGACGGAACTGTAGTTAGTTCTGCAAAAATTCCTACAAGTAAAATGTCATGCCTT
GAAAAGGGCCAAAGTGGTGTACTACCTGAGAAATGGAAGGTTGAGTTACATAAAAGCTCT
CCAACAACTAGTCATAATCCAGAAAGCATGGTAGATAGTGACCTGGTGGAAGATCGTGGT
GAAGAGTTGGACAGACATTTGTCATTGCGCAACAATATCCAGTTTGGCAAGGGTGCAAGT
CTTCATCCCTTGCAGAAATGTGATTCTTCTATTTTCACTTCCATAATACAAGAAAATCAG
CAAGAGTGTGATGAGGAGGCATTGCAAGCTGGCACTTGTGCAGTCATGGGGTTAAGAAAG
ACTGCTTTGAGCAGCAATTTGGACCCTGTTAATGTTCACTCATGTGATACTGAGCATTCT
ACTGGTGAACATAACAGCCCGAGGAATGAACTGCAAGCTGTCAAAAATCCATCTCCTGGC
AATGAAAGAGAAGATGTTGAGAAGTTTATTCGGATGGCCGAATTGGAAAATGCCGTAGGA
AATACTAGGTCAGGGTCTAAGCCATTAAAGATAAAAACCCTTCCCAAGAAGACACTGGGA
TCTGGACTAAGTCTCTGTGAAAGGGATGCAAGAAATCAGGAAGGTACTACATTTCATAAC
AAGACTGTTCCATCAAATGACTCTGCCCCTTCTGTGAGCTGGGGCAGAAAGGACAGAGAT
CACCAAGAGGTTCTCAGCTTTGCAAAGGTTGAGATTCCACCAGCAGGTAGTGCAGAATTA
AGCAAAGAAACAGAGAAAAGAAAGTACTTGGATTCTGGAAAGGAAGATGTTGAAATAGCT
GAATCCATAAATAATGATGCTGAAACTTCAGAGAGCAAAGAGTATGATGAGTTGAATGTC
TTAACAGGTGAAGTCAGTGGAGTACCGCAGTTTCTGGTTACATCTGCAGAGGAACTTGTG
GTGAACGTGGATGGGACTGATGTGGAAGATTGTGCTGTGAGGCATGATGCTGACAACAAG
AACTCTGAAGCTCAAAAGACTATTTCTGGCAAGGACACCAGGTCAAATAAATCAACTTCT
GCAGAGAATGATGTAGATGTGAAAATAACCAAAGGCCCAAAATATTTAATGAAGAGGTCA
AACACAACTAATATAGCTGCTAAAAGAGCTGTAATTTCCCGAAAAGTTGCCAAAAAGAAG
AAGTCCGAAAATGACAAAAAGAAGAATGAGGAAACAGAGAATGAAAAAGGTTTACCTGTA
CCAGGTGAACAAACAGTACTGGCACTTGATCATGAGTTGAACTCCATGGATGTGGAGAAG
GAGAATAGTCCTCTTATTGATGACCAAAGCACGAGATATAATGAACATGGAGCTGGCAAA
AGTTCTCCAAAATGTGATAACAAAAAACCTCTAAAGGCTGATGTTGCAAATCCTCGCTCA
TTGCAGGTTACTAAAGTAGGAACTGAGCAAAGGTGGTTTATCCTTAGTGGGCATCGACTG
CTAAGAAAGGAATTTGAGAAGGTCATCAAACGTTTGAAAGGACATGTGTGCAGAGATTCT
CATCAATGGTCATATCAAGCAACTCATTTCATTGTTCCTGATCTAGTTCGCAGAACTGAA
AAATTGTTTGCTGCTGCAGCCTCTGGAAGGTGGATCCTAAAGTCTGATTATTTAACAGCT
AGCAATGAAGCTGGAAGACTCTTGGATGAAGAAAAATATGAATGGCACAAAAAGGGCTTA
ACAGAAGATTTAGCAATCGACTTAGAAGCTCCAAGGAAGTGGCGGCTTCTGAGGGAGAGA
ACTGGACATGGTGCATTTTATGGAATGAAGATAATCATTTATGGAGACTGCATTGTACCA
CCATTGGATACACTGAAGCGCGCTGTCAAGGCTGGAGATGGTACTATATTAGCAACTTCA
CCTCCTTACACTCGCTTCCTTAACTCAGGTATCGATTTTGCTGTTGTCGATGAGACCATG
CCCCATTATGATAAGTGGGTTCAAGAATTCCTAAGGTGTGAGATACCTTGCATTTTGGCT
GATTACTTGGTGGCTTATGTGTGCAAGCCGGGTTATCCTTGTGACAGTTATGTACAATAC
AATACTCATACTTGGGTAGAAAGGTCATTGAAAAACCTTGAAGATCGCTTGGAAGAAGTT
GTTGTGGATATGGTGCCATCAGATGACAACAGTAAGATAGAATGA