Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023251
CDS Infomation

pacid=37435777 polypeptide=PGSC0003DMP400015835 locus=PGSC0003DMG400009005 ID=PGSC0003DMT400023251.v4.03 annot-version=v4.03
Sequence

ATGGATGGTCTTTGTTTGACAGGAGGAGGGATACAGGGTATGGCGGGGCCTATTGCCGTT
GCCGGTGGTGCCGGAGGTTTAGATGTACGATCGACCCAGTTTAGTACATCGGCGGTTGGA
CGTTCGTCGGCGTCGATGTCGGTTGAAAAGACATCTTCTTATAGGAATAAGTCATGGGGG
TTTTCGTTTAGGTACCCACTTAGATCTTTTTGGTCTGGAGGTAAAGGAAGGTATGATGCT
ATAGCGGTAGACGACGCTGTTTTGATGGAGGAGAATGAGGAGAAGAATGAGGATAAAAAT
GAGAATTGGGTATTGAAGATTTTGCATATTAGGTCTTTGCAGAAGGAGAAGGAGGTAGGG
GAAAAGGGTGGGGGTGATGAAGATCTGGTGGAGAAGGTGGAGGGAGAAGGTGGTGATGAG
ATTGAAGATGATAGTGAAGGGCATAACAAGTATGATGATGGGGATGAAGAAGAATGTGAT
GTGTGTTCTGTAGATGATGATGAAAAATTCAAATTTGATAGAAATTCTTTTTCAAAGTTG
CTTAGGAGGGTCACATTGGCTGAAGCTAGATTGTATGCTCAGATGTCTTATTTGGGAAGT
TTGGCTTATGGAATACCCCAAATTAAGCCAGAAAATTTATTGAGGAATCATGGATTGCGT
CTTGTTACATCTTCATGTGAGAAAAGAGAGCATGCGTTAAAAGCTGAGAAAGAGAAGGCA
GCAGCTGAAGATCAGGAGAAAAAAGAGAATGAAAACGCTCAAACTCAGGGAGAAGAAAGA
AGCACTACAACTTCAGTAGAAGGGAATGGAGAGACCAGCGGGAACAGGATAAGTGCATCC
ACAGCTTACCATATAGCTGCCTCTGCCGCGTCTTATTTGCACTCTCATACAATGAGCATT
CTTCCTTTTAAATCCTCCAAGACTATGCCAAATAATGATTCCTCTGAAACAACCGTCGGA
TGTGATGATAATATAGATGCAATGAACAGGGAAGTTGCTTCTTTTATGGCAACCAGTGAC
TCAGTGACATCAGTAGTTGCTGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGACGACCTA
AATTCAAATCATTCTTCACCCTGTGAATGGTTCGTTTGTGATGATGATCAGAGCTTGACA
AGATTCTTTGTAATTCAGGGATCAGAGTCACTAGCATCATGGAAGGCAAATCTACTCTTT
GAACCTGTTAAATTTGAGGGTCTGGATGTGATGGTCCACCGAGGTATTTATGAAGCTGCA
AAGGGCATGTATGCACAGATGCTACCAGAAGTACGTTCACACCTTAAATCTCATGGTAGT
CATGCCAATTTCCGTTTTACTGGGCACTCTCTTGGTGGAAGTTTATCATTGCTCGTCAAT
CTCATGCTGATCATAAGGGGAGAAGTTCCCCCATCTTCCTTGCTTCCCGTTATAACTTTT
GGCTCACCATCAATAATGTGTGGAGGAGACCGCCTCCTTCGCCTCCTTGGCTTGCCTCGT
AGTCATGTGCAGGCAATCACAATGCACCGAGACATTGTACCCCGAGCCTTCTCTTGCAAT
TATCCCAATCACGTAGCAGAGTTTCTTAAAGCTATCAATGGAAACTTCCGCAATCATCAA
TGTCTGAATAACCAGAAGTTATTGTTTGCTCCAATGGGTGAATTCTTAATTCTGCAGCCA
GATGACAAGTTTTCTCCAAACCATGACCTACTACCTTCAGGTTCCGGTCTGTATTTACTG
AACTGTCCTGTATCAGATTCAACAGAGGCAGAAAAACAACTTCAAGCCGCTCAGTTTGTG
TTTTTAAACTCACCCCATCCACTCGAGATCCTAAGTGATCGCTCTGCCTATGGTTCTGGA
GGAACAGTACAAAGAGACCACGACATGAGCTCATACTTAAAATCAGTTAGAAACGTAATT
CGTCATGAGCTGAACAACATCAGAAAAGCTAAGAGGAAGCAAAGGCGCAGAGTTTGGTGG
CCATTGGTTTCACCAAGTGGGGTTAATGCTGGTATTGTTGTTAGAAGGTACGTTGAATCA
GGTAGTATGGGCCATGGCCAGGTCAACTTTGCTGGCATCTTACAAAGTGGGAAAGAGTCG
TTGAAACGATTCAGTACACTAGTTGCATCACAGCACATGCACTTGCTTGTGGTGCTTTTG
TTTCCTGCACGGTTACTTATTGTGGGGACTTTCAGCATGTTCAATTTTCGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015835
PEP Infomation

pacid=37435777 transcript=PGSC0003DMT400023251 locus=PGSC0003DMG400009005 ID=PGSC0003DMT400023251.v4.03 annot-version=v4.03
Sequence

MDGLCLTGGGIQGMAGPIAVAGGAGGLDVRSTQFSTSAVGRSSASMSVEKTSSYRNKSWG
FSFRYPLRSFWSGGKGRYDAIAVDDAVLMEENEEKNEDKNENWVLKILHIRSLQKEKEVG
EKGGGDEDLVEKVEGEGGDEIEDDSEGHNKYDDGDEEECDVCSVDDDEKFKFDRNSFSKL
LRRVTLAEARLYAQMSYLGSLAYGIPQIKPENLLRNHGLRLVTSSCEKREHALKAEKEKA
AAEDQEKKENENAQTQGEERSTTTSVEGNGETSGNRISASTAYHIAASAASYLHSHTMSI
LPFKSSKTMPNNDSSETTVGCDDNIDAMNREVASFMATSDSVTSVVAAKEEVKQAVADDL
NSNHSSPCEWFVCDDDQSLTRFFVIQGSESLASWKANLLFEPVKFEGLDVMVHRGIYEAA
KGMYAQMLPEVRSHLKSHGSHANFRFTGHSLGGSLSLLVNLMLIIRGEVPPSSLLPVITF
GSPSIMCGGDRLLRLLGLPRSHVQAITMHRDIVPRAFSCNYPNHVAEFLKAINGNFRNHQ
CLNNQKLLFAPMGEFLILQPDDKFSPNHDLLPSGSGLYLLNCPVSDSTEAEKQLQAAQFV
FLNSPHPLEILSDRSAYGSGGTVQRDHDMSSYLKSVRNVIRHELNNIRKAKRKQRRRVWW
PLVSPSGVNAGIVVRRYVESGSMGHGQVNFAGILQSGKESLKRFSTLVASQHMHLLVVLL
FPARLLIVGTFSMFNFR*

Transcript Sequence

Transcript ID

PGSC0003DMT400023251
Transcript Infomation

pacid=37435777 locus=PGSC0003DMG400009005 ID=PGSC0003DMT400023251.v4.03 annot-version=v4.03
Sequence

ATGGATGGTCTTTGTTTGACAGGAGGAGGGATACAGGGTATGGCGGGGCCTATTGCCGTT
GCCGGTGGTGCCGGAGGTTTAGATGTACGATCGACCCAGTTTAGTACATCGGCGGTTGGA
CGTTCGTCGGCGTCGATGTCGGTTGAAAAGACATCTTCTTATAGGAATAAGTCATGGGGG
TTTTCGTTTAGGTACCCACTTAGATCTTTTTGGTCTGGAGGTAAAGGAAGGTATGATGCT
ATAGCGGTAGACGACGCTGTTTTGATGGAGGAGAATGAGGAGAAGAATGAGGATAAAAAT
GAGAATTGGGTATTGAAGATTTTGCATATTAGGTCTTTGCAGAAGGAGAAGGAGGTAGGG
GAAAAGGGTGGGGGTGATGAAGATCTGGTGGAGAAGGTGGAGGGAGAAGGTGGTGATGAG
ATTGAAGATGATAGTGAAGGGCATAACAAGTATGATGATGGGGATGAAGAAGAATGTGAT
GTGTGTTCTGTAGATGATGATGAAAAATTCAAATTTGATAGAAATTCTTTTTCAAAGTTG
CTTAGGAGGGTCACATTGGCTGAAGCTAGATTGTATGCTCAGATGTCTTATTTGGGAAGT
TTGGCTTATGGAATACCCCAAATTAAGCCAGAAAATTTATTGAGGAATCATGGATTGCGT
CTTGTTACATCTTCATGTGAGAAAAGAGAGCATGCGTTAAAAGCTGAGAAAGAGAAGGCA
GCAGCTGAAGATCAGGAGAAAAAAGAGAATGAAAACGCTCAAACTCAGGGAGAAGAAAGA
AGCACTACAACTTCAGTAGAAGGGAATGGAGAGACCAGCGGGAACAGGATAAGTGCATCC
ACAGCTTACCATATAGCTGCCTCTGCCGCGTCTTATTTGCACTCTCATACAATGAGCATT
CTTCCTTTTAAATCCTCCAAGACTATGCCAAATAATGATTCCTCTGAAACAACCGTCGGA
TGTGATGATAATATAGATGCAATGAACAGGGAAGTTGCTTCTTTTATGGCAACCAGTGAC
TCAGTGACATCAGTAGTTGCTGCAAAGGAGGAAGTAAAGCAGGCTGTTGCAGACGACCTA
AATTCAAATCATTCTTCACCCTGTGAATGGTTCGTTTGTGATGATGATCAGAGCTTGACA
AGATTCTTTGTAATTCAGGGATCAGAGTCACTAGCATCATGGAAGGCAAATCTACTCTTT
GAACCTGTTAAATTTGAGGGTCTGGATGTGATGGTCCACCGAGGTATTTATGAAGCTGCA
AAGGGCATGTATGCACAGATGCTACCAGAAGTACGTTCACACCTTAAATCTCATGGTAGT
CATGCCAATTTCCGTTTTACTGGGCACTCTCTTGGTGGAAGTTTATCATTGCTCGTCAAT
CTCATGCTGATCATAAGGGGAGAAGTTCCCCCATCTTCCTTGCTTCCCGTTATAACTTTT
GGCTCACCATCAATAATGTGTGGAGGAGACCGCCTCCTTCGCCTCCTTGGCTTGCCTCGT
AGTCATGTGCAGGCAATCACAATGCACCGAGACATTGTACCCCGAGCCTTCTCTTGCAAT
TATCCCAATCACGTAGCAGAGTTTCTTAAAGCTATCAATGGAAACTTCCGCAATCATCAA
TGTCTGAATAACCAGAAGTTATTGTTTGCTCCAATGGGTGAATTCTTAATTCTGCAGCCA
GATGACAAGTTTTCTCCAAACCATGACCTACTACCTTCAGGTTCCGGTCTGTATTTACTG
AACTGTCCTGTATCAGATTCAACAGAGGCAGAAAAACAACTTCAAGCCGCTCAGTTTGTG
TTTTTAAACTCACCCCATCCACTCGAGATCCTAAGTGATCGCTCTGCCTATGGTTCTGGA
GGAACAGTACAAAGAGACCACGACATGAGCTCATACTTAAAATCAGTTAGAAACGTAATT
CGTCATGAGCTGAACAACATCAGAAAAGCTAAGAGGAAGCAAAGGCGCAGAGTTTGGTGG
CCATTGGTTTCACCAAGTGGGGTTAATGCTGGTATTGTTGTTAGAAGGTACGTTGAATCA
GGTAGTATGGGCCATGGCCAGGTCAACTTTGCTGGCATCTTACAAAGTGGGAAAGAGTCG
TTGAAACGATTCAGTACACTAGTTGCATCACAGCACATGCACTTGCTTGTGGTGCTTTTG
TTTCCTGCACGGTTACTTATTGTGGGGACTTTCAGCATGTTCAATTTTCGTTGA