Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023242
CDS Infomation

pacid=37436233 polypeptide=PGSC0003DMP400015828 locus=PGSC0003DMG400009000 ID=PGSC0003DMT400023242.v4.03 annot-version=v4.03
Sequence

ATGCCGATGTTCAAAACTCCGTTTAACGGTTACTCCGTAAAATTCAGCCCCTTTTACGAA
AATCAACTCGCCGTCGCCACTGCGCAGAATTTCGGCATCCTTGGTAACGGCAGAGTTCAC
ATACTTCAGCTCAGTCCAAATGGACCCATATCGGAACTTGCTGCATTTGACACAGCTGAT
GGAGTTTACGACGTTTGCTGGTCGGAAGCTCACGATTCCCTTGTAATCGCAGCAAGCGGT
GATGGTTCTGTGAAACTCTATGACATTTCTTTGCCTCCCACCAATAACCCGATTCGTTCC
TTTCAAGAGCATACACGGGAAGTTCACTCTGTAGACTATAATACGGTGAGAAAAGATTCC
TTTTTATCAGCGTCTTGGGATGATACTGTGAAGCTATGGACAGTTGATAGAAATGCTAGT
GTAAGGACTTTTAAAGAACATGCTTATTGTGTGTATTCCGCTGCTTGGAATCCAAGACAT
GCTGATATCTTTGCATCTGCTTCTGGGGATTGTACTACTCGCATCTGGGATGTCCGGGAG
CCAGGTTCTACCATGATTCTGCCTGCACACGAGTTTGAAATCCTCACATGTGATTGGAAT
AAGTATGATGATTGTATCATTGCAACTGCGTCAGTTGATAAGTCAATCAAGGTTTGGGAT
ATTAGGAATTATAGAGTGCCAATAGCAGTGCTTAATGGGCATGGATATGCAGTGAGGAAA
GTGAGGTTTTCACCACATAGAGCGAGTGCAATGGTTTCTTGTTCATATGACATGACAGTT
TGCATGTGGGATTACATGGTGGAAGATGCACTTATTGGGAGGTATGATCATCACACAGAG
TTTGCTGTAGGAGTTGATATGAGCGTTCTCGTTGAAGGTCTATTGGCTAGTACAGGATGG
GATGAACTTGTTTATGTTTGGCAACATGGAATGGACCCTAGAGCTCCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015828
PEP Infomation

pacid=37436233 transcript=PGSC0003DMT400023242 locus=PGSC0003DMG400009000 ID=PGSC0003DMT400023242.v4.03 annot-version=v4.03
Sequence

MPMFKTPFNGYSVKFSPFYENQLAVATAQNFGILGNGRVHILQLSPNGPISELAAFDTAD
GVYDVCWSEAHDSLVIAASGDGSVKLYDISLPPTNNPIRSFQEHTREVHSVDYNTVRKDS
FLSASWDDTVKLWTVDRNASVRTFKEHAYCVYSAAWNPRHADIFASASGDCTTRIWDVRE
PGSTMILPAHEFEILTCDWNKYDDCIIATASVDKSIKVWDIRNYRVPIAVLNGHGYAVRK
VRFSPHRASAMVSCSYDMTVCMWDYMVEDALIGRYDHHTEFAVGVDMSVLVEGLLASTGW
DELVYVWQHGMDPRAP*

Transcript Sequence

Transcript ID

PGSC0003DMT400023242
Transcript Infomation

pacid=37436233 locus=PGSC0003DMG400009000 ID=PGSC0003DMT400023242.v4.03 annot-version=v4.03
Sequence

ATGCCGATGTTCAAAACTCCGTTTAACGGTTACTCCGTAAAATTCAGCCCCTTTTACGAA
AATCAACTCGCCGTCGCCACTGCGCAGAATTTCGGCATCCTTGGTAACGGCAGAGTTCAC
ATACTTCAGCTCAGTCCAAATGGACCCATATCGGAACTTGCTGCATTTGACACAGCTGAT
GGAGTTTACGACGTTTGCTGGTCGGAAGCTCACGATTCCCTTGTAATCGCAGCAAGCGGT
GATGGTTCTGTGAAACTCTATGACATTTCTTTGCCTCCCACCAATAACCCGATTCGTTCC
TTTCAAGAGCATACACGGGAAGTTCACTCTGTAGACTATAATACGGTGAGAAAAGATTCC
TTTTTATCAGCGTCTTGGGATGATACTGTGAAGCTATGGACAGTTGATAGAAATGCTAGT
GTAAGGACTTTTAAAGAACATGCTTATTGTGTGTATTCCGCTGCTTGGAATCCAAGACAT
GCTGATATCTTTGCATCTGCTTCTGGGGATTGTACTACTCGCATCTGGGATGTCCGGGAG
CCAGGTTCTACCATGATTCTGCCTGCACACGAGTTTGAAATCCTCACATGTGATTGGAAT
AAGTATGATGATTGTATCATTGCAACTGCGTCAGTTGATAAGTCAATCAAGGTTTGGGAT
ATTAGGAATTATAGAGTGCCAATAGCAGTGCTTAATGGGCATGGATATGCAGTGAGGAAA
GTGAGGTTTTCACCACATAGAGCGAGTGCAATGGTTTCTTGTTCATATGACATGACAGTT
TGCATGTGGGATTACATGGTGGAAGATGCACTTATTGGGAGGTATGATCATCACACAGAG
TTTGCTGTAGGAGTTGATATGAGCGTTCTCGTTGAAGGTCTATTGGCTAGTACAGGATGG
GATGAACTTGTTTATGTTTGGCAACATGGAATGGACCCTAGAGCTCCTTGA