Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023237
CDS Infomation

pacid=37436587 polypeptide=PGSC0003DMP400015823 locus=PGSC0003DMG400008998 ID=PGSC0003DMT400023237.v4.03 annot-version=v4.03
Sequence

ATGGTGAAGGCGATGCCAGGTGCTGATGATGATAGCAGCAGTATCGCCATGACCACTCTA
ACCACCAGCAACAACATTCTCTTATCCAAAGAGGCCATCTTTATTATTATTATTATTGTT
ATGCTCCTTTTGATCATTTTTTTAATCTTAATCGCCTGCAAGTATAAGCCATGGCGTTTC
TTTTACTCTCATCCTGTCTCCTCCAACTCTGTCTTTCGCAATAAGAACACAATCAAGGGT
GAAGATATAGAGAGGCCTCTTATTTCAGATGATTTGCATCTAGTTGAAAGCCAGAGTCAT
GAATATTCTAGAGGTTATGCTCATGATGCAGGCGGTCACCAGAATCAAGGGGCTTATGGT
TCACCCTGGACACAAGGACTTGTTCATAAACAAAGGCTGACCTCCATAAATCCTCAATTA
ACACATACCGACAGTTTTGTTCTGGATGTTTGTGATTCTTCAGAAGATATTTCTGTTGGC
CAGACGCTTAAGCGCCCACTTGTGTTTAATCAGTTAGCAGAAGAACAGAAACACATCAGA
CCAGAGGATGTAAAGTACAGACCGAATTTGGCAATACAGAACGAGAAGTTCGGAGATTTT
GCTCCAAAAGATACAAAAGATCAAAGAAGCATCCTCATGCTGGAGGTTATCTCAGGACCC
TGTCAAGGTCTTCAACATTCCATGCAGTCAACAGATACATCTAGGCTTCCACTTACTCTT
GGAAGAGTGACACCTAGTGATATCTTGGTGATGGATTCAGAGGTTTCTGGCAAGCATGCT
ATGATAAACTGGAATATAAATAAATTGAGGTGGGAGCTGGTTGACATGGGTAGCTTGAAT
GGCACACTAGTAAATTCCAATGCTGTGCATAATCCTCATTCTGGGAGCAGACAGTGGGGC
GATCCAATTGAGCTTGCAAATGGAGACATAATAACACTTGGCACAACTTCGAGAATATTT
GTACATATTAGATCCCAAAATGATCAGGTCCCATTTGGGATTGGTATAGCATCAGATGCC
ATGGCCGTACGTCGAGGAGGAAAGAAGCTGCCTATGGAAGATGTTTGCTATTACCATTGG
CCTCTTCCGGGAACGGATAAGTTTGGATTGTTTGGGATATGCGACGGACACGGAGGAGCA
GATGCTGCGGCATCTGTCAGCAAAATAATGCCTCAGATGGTTGCTAGCATCCTGTCAGAT
TCATATAGAAGGGAGAGGGTATTATCACAATCTGATGCTTCAGATGTTCTTAGAGAGGCG
TTCTCTCAAACGGAAGCAAGTATAGACCACCACTATGAGGGATGTACTGCAACAGTGCTT
CTGGTTTGGTCTGATGGTGATGGGAATTTTTATGCGCAATGTGCAAACGTTGGAGATTCA
GCTTGTGTTGTAAATATTGACGGGAAGCAGACAAAAATGACTGAAGATCACAGAATAACT
AGTCACTCTGAAAGGCTGCGTATCCAAGCAACAGGGGAGCCTTTAAAAGATGGGGAAACG
AGACTATGTGGTTTAAACCTTGCTCGTATGCTCGGAGACAAATTTCTTAAACAGCAAGAT
GTTCGCTTCAGTTCAGAACCTTATATTAGTCAAGTTGTGTACATACATCAAGCTAGCAAA
GGATTCGCACTGTTAGCTAGTGATGGCTTCTGGGATGTTATTAATGTTAAGAAGGCAATT
CAACTAGTCCAACAGGCAAAGGAGAGAATCTCAACAGAGGAAGAAATTTCTGCAGAGAAA
ATAGCAAATTCTTTGTTGAGCGAGGCCAGAACATTGCGTACAAAAGACAACACTTCAATA
ATTTTCTTAGATTTCGACAACGCCCATAGAATTCTTTCTTGTAAACTTGATTCATAG

Peptide Sequence

PEP ID

PGSC0003DMP400015823
PEP Infomation

pacid=37436587 transcript=PGSC0003DMT400023237 locus=PGSC0003DMG400008998 ID=PGSC0003DMT400023237.v4.03 annot-version=v4.03
Sequence

MVKAMPGADDDSSSIAMTTLTTSNNILLSKEAIFIIIIIVMLLLIIFLILIACKYKPWRF
FYSHPVSSNSVFRNKNTIKGEDIERPLISDDLHLVESQSHEYSRGYAHDAGGHQNQGAYG
SPWTQGLVHKQRLTSINPQLTHTDSFVLDVCDSSEDISVGQTLKRPLVFNQLAEEQKHIR
PEDVKYRPNLAIQNEKFGDFAPKDTKDQRSILMLEVISGPCQGLQHSMQSTDTSRLPLTL
GRVTPSDILVMDSEVSGKHAMINWNINKLRWELVDMGSLNGTLVNSNAVHNPHSGSRQWG
DPIELANGDIITLGTTSRIFVHIRSQNDQVPFGIGIASDAMAVRRGGKKLPMEDVCYYHW
PLPGTDKFGLFGICDGHGGADAAASVSKIMPQMVASILSDSYRRERVLSQSDASDVLREA
FSQTEASIDHHYEGCTATVLLVWSDGDGNFYAQCANVGDSACVVNIDGKQTKMTEDHRIT
SHSERLRIQATGEPLKDGETRLCGLNLARMLGDKFLKQQDVRFSSEPYISQVVYIHQASK
GFALLASDGFWDVINVKKAIQLVQQAKERISTEEEISAEKIANSLLSEARTLRTKDNTSI
IFLDFDNAHRILSCKLDS*

Transcript Sequence

Transcript ID

PGSC0003DMT400023237
Transcript Infomation

pacid=37436587 locus=PGSC0003DMG400008998 ID=PGSC0003DMT400023237.v4.03 annot-version=v4.03
Sequence

ATGGTGAAGGCGATGCCAGGTGCTGATGATGATAGCAGCAGTATCGCCATGACCACTCTA
ACCACCAGCAACAACATTCTCTTATCCAAAGAGGCCATCTTTATTATTATTATTATTGTT
ATGCTCCTTTTGATCATTTTTTTAATCTTAATCGCCTGCAAGTATAAGCCATGGCGTTTC
TTTTACTCTCATCCTGTCTCCTCCAACTCTGTCTTTCGCAATAAGAACACAATCAAGGGT
GAAGATATAGAGAGGCCTCTTATTTCAGATGATTTGCATCTAGTTGAAAGCCAGAGTCAT
GAATATTCTAGAGGTTATGCTCATGATGCAGGCGGTCACCAGAATCAAGGGGCTTATGGT
TCACCCTGGACACAAGGACTTGTTCATAAACAAAGGCTGACCTCCATAAATCCTCAATTA
ACACATACCGACAGTTTTGTTCTGGATGTTTGTGATTCTTCAGAAGATATTTCTGTTGGC
CAGACGCTTAAGCGCCCACTTGTGTTTAATCAGTTAGCAGAAGAACAGAAACACATCAGA
CCAGAGGATGTAAAGTACAGACCGAATTTGGCAATACAGAACGAGAAGTTCGGAGATTTT
GCTCCAAAAGATACAAAAGATCAAAGAAGCATCCTCATGCTGGAGGTTATCTCAGGACCC
TGTCAAGGTCTTCAACATTCCATGCAGTCAACAGATACATCTAGGCTTCCACTTACTCTT
GGAAGAGTGACACCTAGTGATATCTTGGTGATGGATTCAGAGGTTTCTGGCAAGCATGCT
ATGATAAACTGGAATATAAATAAATTGAGGTGGGAGCTGGTTGACATGGGTAGCTTGAAT
GGCACACTAGTAAATTCCAATGCTGTGCATAATCCTCATTCTGGGAGCAGACAGTGGGGC
GATCCAATTGAGCTTGCAAATGGAGACATAATAACACTTGGCACAACTTCGAGAATATTT
GTACATATTAGATCCCAAAATGATCAGGTCCCATTTGGGATTGGTATAGCATCAGATGCC
ATGGCCGTACGTCGAGGAGGAAAGAAGCTGCCTATGGAAGATGTTTGCTATTACCATTGG
CCTCTTCCGGGAACGGATAAGTTTGGATTGTTTGGGATATGCGACGGACACGGAGGAGCA
GATGCTGCGGCATCTGTCAGCAAAATAATGCCTCAGATGGTTGCTAGCATCCTGTCAGAT
TCATATAGAAGGGAGAGGGTATTATCACAATCTGATGCTTCAGATGTTCTTAGAGAGGCG
TTCTCTCAAACGGAAGCAAGTATAGACCACCACTATGAGGGATGTACTGCAACAGTGCTT
CTGGTTTGGTCTGATGGTGATGGGAATTTTTATGCGCAATGTGCAAACGTTGGAGATTCA
GCTTGTGTTGTAAATATTGACGGGAAGCAGACAAAAATGACTGAAGATCACAGAATAACT
AGTCACTCTGAAAGGCTGCGTATCCAAGCAACAGGGGAGCCTTTAAAAGATGGGGAAACG
AGACTATGTGGTTTAAACCTTGCTCGTATGCTCGGAGACAAATTTCTTAAACAGCAAGAT
GTTCGCTTCAGTTCAGAACCTTATATTAGTCAAGTTGTGTACATACATCAAGCTAGCAAA
GGATTCGCACTGTTAGCTAGTGATGGCTTCTGGGATGTTATTAATGTTAAGAAGGCAATT
CAACTAGTCCAACAGGCAAAGGAGAGAATCTCAACAGAGGAAGAAATTTCTGCAGAGAAA
ATAGCAAATTCTTTGTTGAGCGAGGCCAGAACATTGCGTACAAAAGACAACACTTCAATA
ATTTTCTTAGATTTCGACAACGCCCATAGAATTCTTTCTTGTAAACTTGATTCATAG