Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023236
CDS Infomation

pacid=37436706 polypeptide=PGSC0003DMP400015822 locus=PGSC0003DMG400008997 ID=PGSC0003DMT400023236.v4.03 annot-version=v4.03
Sequence

ATGCAGGATTTCATCGGCTCCGTTCGCCGATCTCTAGTTTTCAAACCTTCCGGCGACTCG
GAAATCGGTGCCGGCAGTGCATTTGGAGGTTTCGTTGAGAAAATCGGTTCTAGTATCCGT
AAATCGAGTATTGGAATCTTCTCCAAGTCACAAATTCCTGCTCTTCCGTCTATTTCTAAA
GCTGAGTCTTCACCGGTGAAGGCGGATAGGAAAGATGATAATCCGCCAATCCGCTGGAGG
AAAGGTGAAATGATTGGATGTGGTGCTTTTGGTAGGGTTTATATGGGGATGAATGTTGAT
TCTGGAGAGCTGCTTGCTATAAAGGAGGTTTCCATTGCGATGAATGGTGCTTCAAGAGAG
CGAGCTCAAGCTCATGTAAGAGAGCTCGAGGAAGAAGTGAATCTATTGAAGAATCTCTCC
CATCCCAACATAGTGAGATACTTGGGAACTGCAAGAGAGGTGGGATCATTAAATATATTG
TTGGAATTTGTTCCTGGTGGCTCAATCTCGTCACTTTTGGGAAAATTTGGATCCTTCCCT
GAATCTGTTATAAGAATGTACACCAAACAATTGTTATTGGGTCTGGAATATTTGCATAAG
AATGGAATTATGCACAGAGATATTAAGGGAGCAAACATACTTGTCGATAATAAAGGTTGC
ATTAAACTTGCTGATTTTGGTGCATCCAAGAAGGTTGTTGAATTGGCTACTATGACTGGT
GCCAAGTCAATGAAGGGTACTCCATACTGGATGGCTCCTGAAGTTATTCTGCAGACTGGC
CATAGCTTCTCTGCTGACATATGGAGTGTTGGATGTACTATTATTGAAATGGCTACTGGA
AAACCTCCTTGGAGTCAGCAGTATCAGGAGGTTGCCGCTCTCTTTCATATTGGGACAACT
AAATCCCATCCTCCCATCCCAGAGCATCTTTCTGCTGAAGCAAAGGACTTTCTATTAAAA
TGCTTGCAGAAGGAACCACACCTGAGGACTTCTGCATCAAATTTGCTACAGCATCCATTT
GTTACGGGGGAACATCAGGAAGCACGCCCTTTTCTTCACTCTTCCTTTCTGGGAAACCCC
GAAAACATGGCAGCACAAAGGATGGATGTTAGAACCTCAACCAATCTTGATATAAGAGCT
ACCTGCAATGGTTTGAAAGATGTTTGTGACGTGAGCACTGTGAGGTGCTCCACTGTATAT
CCTGAGAATTCATTAGGAAACGAGTCACTTTGGAAACTAGGGAATTCAGACGATGACATG
TGCCAGATGGATAATGATGATTTTATGTTTGGCGCATCTGTGAAATGCAGTTCAGATTTG
CATTCCCATGCTAATTATAAGAGTTTCAACCCTATGTCTGAACCTGATAATGATTGGCCA
TGCAAATTCGATGAAAGTCCCGAGTTAACGAGAAGTCAAGCAAACCTTGATTTTGGTCAA
GCAACTATTAAGCCCACAAATAGCCCTATCATGTCATACAAGGAGGATGCTTTCGCATTT
TCTGGTGGGCAATCTGCAGCCGAGGATGATGATGAATTGACGGAGTCCAAAATTAGAGCA
TTCCTTGATGAAAAGGCAATGGATTTGAAGAAGCTGCAATCGCCACTATATGAAGAATTC
CTTAATTCTATGAACGTTTCCAGCACCCCGAGTCCTGCTGGCATTGGGAACAAGGAAAAT
TTTCCAAGTAATGTAAACTTACCACCAAAAAGCAGGTCCCCAAAACGTTTTCTTAGCAGA
AGACTTTCTACTGCCACTGAAGGTGCTTGTGCTCCTAGCCCAGTTACTCATTCCAAGAGA
ATATCAAATATTGGTGGCTTAGGTAATGAAGCTATTCAGGAACTTCAATCACCAAGGAAC
AATGAATTTAAAGATCCTCTTGGTTCTCAACGTGACGCCGTCAATTCAAGCTTCTCTGAG
AGGCAAAGAAAGTGGAAAGAAGAGCTTGATGAAGAGTTGCAAAGGAAACGAGAGATTATG
CGTCAGGCAGTCAACTTATCACCGCCAATGGATCCAGTTTTAAATCGATGTAGAAGTAAA
TCAAGGTTTGCATCTCCTGGGAGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400015822
PEP Infomation

pacid=37436706 transcript=PGSC0003DMT400023236 locus=PGSC0003DMG400008997 ID=PGSC0003DMT400023236.v4.03 annot-version=v4.03
Sequence

MQDFIGSVRRSLVFKPSGDSEIGAGSAFGGFVEKIGSSIRKSSIGIFSKSQIPALPSISK
AESSPVKADRKDDNPPIRWRKGEMIGCGAFGRVYMGMNVDSGELLAIKEVSIAMNGASRE
RAQAHVRELEEEVNLLKNLSHPNIVRYLGTAREVGSLNILLEFVPGGSISSLLGKFGSFP
ESVIRMYTKQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATMTG
AKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTIIEMATGKPPWSQQYQEVAALFHIGTT
KSHPPIPEHLSAEAKDFLLKCLQKEPHLRTSASNLLQHPFVTGEHQEARPFLHSSFLGNP
ENMAAQRMDVRTSTNLDIRATCNGLKDVCDVSTVRCSTVYPENSLGNESLWKLGNSDDDM
CQMDNDDFMFGASVKCSSDLHSHANYKSFNPMSEPDNDWPCKFDESPELTRSQANLDFGQ
ATIKPTNSPIMSYKEDAFAFSGGQSAAEDDDELTESKIRAFLDEKAMDLKKLQSPLYEEF
LNSMNVSSTPSPAGIGNKENFPSNVNLPPKSRSPKRFLSRRLSTATEGACAPSPVTHSKR
ISNIGGLGNEAIQELQSPRNNEFKDPLGSQRDAVNSSFSERQRKWKEELDEELQRKREIM
RQAVNLSPPMDPVLNRCRSKSRFASPGR*

Transcript Sequence

Transcript ID

PGSC0003DMT400023236
Transcript Infomation

pacid=37436706 locus=PGSC0003DMG400008997 ID=PGSC0003DMT400023236.v4.03 annot-version=v4.03
Sequence

ATGCAGGATTTCATCGGCTCCGTTCGCCGATCTCTAGTTTTCAAACCTTCCGGCGACTCG
GAAATCGGTGCCGGCAGTGCATTTGGAGGTTTCGTTGAGAAAATCGGTTCTAGTATCCGT
AAATCGAGTATTGGAATCTTCTCCAAGTCACAAATTCCTGCTCTTCCGTCTATTTCTAAA
GCTGAGTCTTCACCGGTGAAGGCGGATAGGAAAGATGATAATCCGCCAATCCGCTGGAGG
AAAGGTGAAATGATTGGATGTGGTGCTTTTGGTAGGGTTTATATGGGGATGAATGTTGAT
TCTGGAGAGCTGCTTGCTATAAAGGAGGTTTCCATTGCGATGAATGGTGCTTCAAGAGAG
CGAGCTCAAGCTCATGTAAGAGAGCTCGAGGAAGAAGTGAATCTATTGAAGAATCTCTCC
CATCCCAACATAGTGAGATACTTGGGAACTGCAAGAGAGGTGGGATCATTAAATATATTG
TTGGAATTTGTTCCTGGTGGCTCAATCTCGTCACTTTTGGGAAAATTTGGATCCTTCCCT
GAATCTGTTATAAGAATGTACACCAAACAATTGTTATTGGGTCTGGAATATTTGCATAAG
AATGGAATTATGCACAGAGATATTAAGGGAGCAAACATACTTGTCGATAATAAAGGTTGC
ATTAAACTTGCTGATTTTGGTGCATCCAAGAAGGTTGTTGAATTGGCTACTATGACTGGT
GCCAAGTCAATGAAGGGTACTCCATACTGGATGGCTCCTGAAGTTATTCTGCAGACTGGC
CATAGCTTCTCTGCTGACATATGGAGTGTTGGATGTACTATTATTGAAATGGCTACTGGA
AAACCTCCTTGGAGTCAGCAGTATCAGGAGGTTGCCGCTCTCTTTCATATTGGGACAACT
AAATCCCATCCTCCCATCCCAGAGCATCTTTCTGCTGAAGCAAAGGACTTTCTATTAAAA
TGCTTGCAGAAGGAACCACACCTGAGGACTTCTGCATCAAATTTGCTACAGCATCCATTT
GTTACGGGGGAACATCAGGAAGCACGCCCTTTTCTTCACTCTTCCTTTCTGGGAAACCCC
GAAAACATGGCAGCACAAAGGATGGATGTTAGAACCTCAACCAATCTTGATATAAGAGCT
ACCTGCAATGGTTTGAAAGATGTTTGTGACGTGAGCACTGTGAGGTGCTCCACTGTATAT
CCTGAGAATTCATTAGGAAACGAGTCACTTTGGAAACTAGGGAATTCAGACGATGACATG
TGCCAGATGGATAATGATGATTTTATGTTTGGCGCATCTGTGAAATGCAGTTCAGATTTG
CATTCCCATGCTAATTATAAGAGTTTCAACCCTATGTCTGAACCTGATAATGATTGGCCA
TGCAAATTCGATGAAAGTCCCGAGTTAACGAGAAGTCAAGCAAACCTTGATTTTGGTCAA
GCAACTATTAAGCCCACAAATAGCCCTATCATGTCATACAAGGAGGATGCTTTCGCATTT
TCTGGTGGGCAATCTGCAGCCGAGGATGATGATGAATTGACGGAGTCCAAAATTAGAGCA
TTCCTTGATGAAAAGGCAATGGATTTGAAGAAGCTGCAATCGCCACTATATGAAGAATTC
CTTAATTCTATGAACGTTTCCAGCACCCCGAGTCCTGCTGGCATTGGGAACAAGGAAAAT
TTTCCAAGTAATGTAAACTTACCACCAAAAAGCAGGTCCCCAAAACGTTTTCTTAGCAGA
AGACTTTCTACTGCCACTGAAGGTGCTTGTGCTCCTAGCCCAGTTACTCATTCCAAGAGA
ATATCAAATATTGGTGGCTTAGGTAATGAAGCTATTCAGGAACTTCAATCACCAAGGAAC
AATGAATTTAAAGATCCTCTTGGTTCTCAACGTGACGCCGTCAATTCAAGCTTCTCTGAG
AGGCAAAGAAAGTGGAAAGAAGAGCTTGATGAAGAGTTGCAAAGGAAACGAGAGATTATG
CGTCAGGCAGTCAACTTATCACCGCCAATGGATCCAGTTTTAAATCGATGTAGAAGTAAA
TCAAGGTTTGCATCTCCTGGGAGATAA