Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023148
CDS Infomation

pacid=37456090 polypeptide=PGSC0003DMP400015776 locus=PGSC0003DMG400008963 ID=PGSC0003DMT400023148.v4.03 annot-version=v4.03
Sequence

ATGGAGCAGAGTCAACCACCGCCGACAACGCCGGCGCCGGCGACACCCATTTCACAGCCA
GCTGAACAAATTCCGGCAGCATCTCCGGCTCCACCACCTCCTTCCTCCACCGCAATCAGT
CAACTTCCTTCTACAACAACCACTACATCAGTAGTATCACAGCCAGTAAACCTAAACCCT
ACCACCACCACTTCAGCTACTAAAACCACTGTCACCACCACCATCACTTCAGGTACTAAA
ACCATCACCACCACCACCATCAGTCCCGGTGGTACCATCTCTGCTGCCGCCGCGGCACAG
CAGCAAAACCCTTCAGCAGCCACTTCACAAAATGCTCAAGCAAGACAACCCTTTGGCCGG
CCATGGCAACAGCCTTCACCTTTTCAACACTTTTCGTTACCTCCTCCACCTCCCCCACCA
CCACCTCACTCGTCGTCATCATCTTCTTCGATTTCGTCTTCTTTGGTTTCTATGCAAAAC
CAAAACCCTAGAGGTGGTATGGCTATGGGAGTACCTGCTCATCACCCTAGTAGCTCTTTC
TCTTCATTGACGACGCCTTCTTATGGACAGCAATTTGGTGGTTTAGGTCGCAATTTGCCT
GATTCTACGCCGCCCACCTCAACTACCTCACAGGTGAGGCAGCCTATACAAGGAATGCAT
GGGATGGGAATGATGGGATCACTTGGTTCAACTTCACCGATGCGTCCTGCAGGGGTTTCT
CCTCAGCAACTGAGACCTGTCTCCTCTTCGATTAGACCTCAGACGAGCATCAGTAGTCAG
TCTGCTGCTACACAGAATTTTCAAGGCCATAGCATGTTGAGAGTTCAGTCAGTTGGATTT
CCGCCGTCCCAATCACATACTACCTCTCAAAGTCCAAGGACACAGACTCAGCCATGGTTA
TCTTCAGGAGCACCGGGGAAGCCCCCTTTGCCGACACCATCATTGAGACCTCAAATTAAT
CCTCAGTCTTTGCATCAAAGGTCCCATATTCTTGCACCGCATCAGCATACTGTTACTACT
ACATCTTCTGCCCAACAGTCACAGTCACAGCCTTCAGCCTCAAGTCAGTCCCAAGATCAT
TTGGGGCAACAGATGCCTCCATCCAGGATTCAACAATCATTATCTAATCAACCACTTGGC
CGAGGTCAGGGTTTAGGAATCCAGAGACCTTCATCACATGCATTGATGCAACCCACTGCA
GTCCAGCCAGGACCACCTAGTAAGGCTGCTACCACTTTAGAGATGGGAGATCCTTGTACT
AGGATTCTAAGCAAGAGAAGCATCCAAGAGATTGTGACCCAGATTGATCCATCAGAGAAA
TTGGATGCTGAAGTTGAAGACATCCTCGTTGATATAGCAGAGGAATTTGTGGAATCTATT
ACCACATTTGGCTGTTCATTGGCCAAGCATCGAAAATCCAATACATTGGAAGCAAAGGAC
ATCCTTCTGCATCTTGAAAGGAATTGGAATATGACTCTCCCTGGTTTTGGCGGGGATGAA
ATCAGAGCCTACAAGAAGCCATTAACAAGTGACATCCACAAGGAGAGAATAGCAGTGATA
AAGAAATCGACTCTCGTGGCCGAGATGACAAATGCAAAGGGCCCAACACAAACTGGTGGG
AATATGAAAAGCCATTTAGCAAAGAGTGCAGCTAATATTTTGGGTTCCCCTAATGCCAAG
ACATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015776
PEP Infomation

pacid=37456090 transcript=PGSC0003DMT400023148 locus=PGSC0003DMG400008963 ID=PGSC0003DMT400023148.v4.03 annot-version=v4.03
Sequence

MEQSQPPPTTPAPATPISQPAEQIPAASPAPPPPSSTAISQLPSTTTTTSVVSQPVNLNP
TTTTSATKTTVTTTITSGTKTITTTTISPGGTISAAAAAQQQNPSAATSQNAQARQPFGR
PWQQPSPFQHFSLPPPPPPPPPHSSSSSSSISSSLVSMQNQNPRGGMAMGVPAHHPSSSF
SSLTTPSYGQQFGGLGRNLPDSTPPTSTTSQVRQPIQGMHGMGMMGSLGSTSPMRPAGVS
PQQLRPVSSSIRPQTSISSQSAATQNFQGHSMLRVQSVGFPPSQSHTTSQSPRTQTQPWL
SSGAPGKPPLPTPSLRPQINPQSLHQRSHILAPHQHTVTTTSSAQQSQSQPSASSQSQDH
LGQQMPPSRIQQSLSNQPLGRGQGLGIQRPSSHALMQPTAVQPGPPSKAATTLEMGDPCT
RILSKRSIQEIVTQIDPSEKLDAEVEDILVDIAEEFVESITTFGCSLAKHRKSNTLEAKD
ILLHLERNWNMTLPGFGGDEIRAYKKPLTSDIHKERIAVIKKSTLVAEMTNAKGPTQTGG
NMKSHLAKSAANILGSPNAKT*

Transcript Sequence

Transcript ID

PGSC0003DMT400023148
Transcript Infomation

pacid=37456090 locus=PGSC0003DMG400008963 ID=PGSC0003DMT400023148.v4.03 annot-version=v4.03
Sequence

ATGGAGCAGAGTCAACCACCGCCGACAACGCCGGCGCCGGCGACACCCATTTCACAGCCA
GCTGAACAAATTCCGGCAGCATCTCCGGCTCCACCACCTCCTTCCTCCACCGCAATCAGT
CAACTTCCTTCTACAACAACCACTACATCAGTAGTATCACAGCCAGTAAACCTAAACCCT
ACCACCACCACTTCAGCTACTAAAACCACTGTCACCACCACCATCACTTCAGGTACTAAA
ACCATCACCACCACCACCATCAGTCCCGGTGGTACCATCTCTGCTGCCGCCGCGGCACAG
CAGCAAAACCCTTCAGCAGCCACTTCACAAAATGCTCAAGCAAGACAACCCTTTGGCCGG
CCATGGCAACAGCCTTCACCTTTTCAACACTTTTCGTTACCTCCTCCACCTCCCCCACCA
CCACCTCACTCGTCGTCATCATCTTCTTCGATTTCGTCTTCTTTGGTTTCTATGCAAAAC
CAAAACCCTAGAGGTGGTATGGCTATGGGAGTACCTGCTCATCACCCTAGTAGCTCTTTC
TCTTCATTGACGACGCCTTCTTATGGACAGCAATTTGGTGGTTTAGGTCGCAATTTGCCT
GATTCTACGCCGCCCACCTCAACTACCTCACAGGTGAGGCAGCCTATACAAGGAATGCAT
GGGATGGGAATGATGGGATCACTTGGTTCAACTTCACCGATGCGTCCTGCAGGGGTTTCT
CCTCAGCAACTGAGACCTGTCTCCTCTTCGATTAGACCTCAGACGAGCATCAGTAGTCAG
TCTGCTGCTACACAGAATTTTCAAGGCCATAGCATGTTGAGAGTTCAGTCAGTTGGATTT
CCGCCGTCCCAATCACATACTACCTCTCAAAGTCCAAGGACACAGACTCAGCCATGGTTA
TCTTCAGGAGCACCGGGGAAGCCCCCTTTGCCGACACCATCATTGAGACCTCAAATTAAT
CCTCAGTCTTTGCATCAAAGGTCCCATATTCTTGCACCGCATCAGCATACTGTTACTACT
ACATCTTCTGCCCAACAGTCACAGTCACAGCCTTCAGCCTCAAGTCAGTCCCAAGATCAT
TTGGGGCAACAGATGCCTCCATCCAGGATTCAACAATCATTATCTAATCAACCACTTGGC
CGAGGTCAGGGTTTAGGAATCCAGAGACCTTCATCACATGCATTGATGCAACCCACTGCA
GTCCAGCCAGGACCACCTAGTAAGGCTGCTACCACTTTAGAGATGGGAGATCCTTGTACT
AGGATTCTAAGCAAGAGAAGCATCCAAGAGATTGTGACCCAGATTGATCCATCAGAGAAA
TTGGATGCTGAAGTTGAAGACATCCTCGTTGATATAGCAGAGGAATTTGTGGAATCTATT
ACCACATTTGGCTGTTCATTGGCCAAGCATCGAAAATCCAATACATTGGAAGCAAAGGAC
ATCCTTCTGCATCTTGAAAGGAATTGGAATATGACTCTCCCTGGTTTTGGCGGGGATGAA
ATCAGAGCCTACAAGAAGCCATTAACAAGTGACATCCACAAGGAGAGAATAGCAGTGATA
AAGAAATCGACTCTCGTGGCCGAGATGACAAATGCAAAGGGCCCAACACAAACTGGTGGG
AATATGAAAAGCCATTTAGCAAAGAGTGCAGCTAATATTTTGGGTTCCCCTAATGCCAAG
ACATGA