Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023143
CDS Infomation

pacid=37457473 polypeptide=PGSC0003DMP400015773 locus=PGSC0003DMG400008961 ID=PGSC0003DMT400023143.v4.03 annot-version=v4.03
Sequence

ATGAAGATCTCCAACTTCTTCATTTTCTCCTTCTTCTTAATCACAGGATTTTTGTGGGGT
GTTCGAGTTGAAGGTTTACGTCATCACCACCACCACCACCACCGTCACCAGAATAGCCAT
AATAACCCAAAAAGTTACAAAAATGACCAAAAAGATCACCAATTTTATAATTTTAAACCA
ACAAAAATGTTTGTATTTGGAGATTCATATGTTGATACTGGTAATAATAGAAAATCAATG
GCTAATTCTTGGAAACAACCTTATGGTCTCACTTTTCCCGGCAAGCCCTCCGGCAGGTTT
TCCGATGGACGTGTTCTCACCGATTACCTAGCAAAATTCTTGGGATTGAAGTCACCAGTA
CCATATAGATGGATGAAATATGCAACAAATAGGCTAAGATATGGAATTAATTTTGCCTAT
GGAGGAACTGGTGTTTTTAATACTACAGTCCCAGAGCCAAACATGACAACTCAAATTGAT
TTTTTCCAAAAATTAATGGCTGAATCAGTATACACAAAGGCAGATATTGAACAATCATTG
TTCTTGCTTTCTCTTGCTGGAAATGATTATGGTGCTTACCTTGCTAATGGTGGTACAGTT
CAGGATATTCCTGCCTTCATAACTAGTGTGGTAAACCAACTAGTTGTAAACATGAAAAGA
GTCAACAAATTAGGTGCCAAAAAGATAGCAGTGACAGCATTGGAACCATTAGGATGTCTT
CCACAAAGCACAATTTTGAATTCATTTCAACAATGCAATGCTACTGAGAATATTGCTGTG
GATCTTCACAATTCACTATTGCAACAAGCTGTGGCAAAATTGAACAATGAGACAATGGGT
TCAACTTTTGTGATTCTTGATCTTTTTAGCTCTTTCAACTCTGTGCTGGCAAGTAAAGGA
GTGCAAGGAAGCACGAGGTTCGAGACACCATTGAAGCCATGTTGTATGGGAATAAGCAAC
AAATATTCATGTGGAAGTATGAATGTTAAAGGTGAAAAGATGTATACAGTGTGCAATGAT
CCAAAATCTGCATTTTTTTGGGACACAGTTCATCCAACTGAAGCTGGATGGCATGCTGTT
TATACTAACTTGAAATCTACTCTCACTCAAAAAATCCTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015773
PEP Infomation

pacid=37457473 transcript=PGSC0003DMT400023143 locus=PGSC0003DMG400008961 ID=PGSC0003DMT400023143.v4.03 annot-version=v4.03
Sequence

MKISNFFIFSFFLITGFLWGVRVEGLRHHHHHHHRHQNSHNNPKSYKNDQKDHQFYNFKP
TKMFVFGDSYVDTGNNRKSMANSWKQPYGLTFPGKPSGRFSDGRVLTDYLAKFLGLKSPV
PYRWMKYATNRLRYGINFAYGGTGVFNTTVPEPNMTTQIDFFQKLMAESVYTKADIEQSL
FLLSLAGNDYGAYLANGGTVQDIPAFITSVVNQLVVNMKRVNKLGAKKIAVTALEPLGCL
PQSTILNSFQQCNATENIAVDLHNSLLQQAVAKLNNETMGSTFVILDLFSSFNSVLASKG
VQGSTRFETPLKPCCMGISNKYSCGSMNVKGEKMYTVCNDPKSAFFWDTVHPTEAGWHAV
YTNLKSTLTQKIL*

Transcript Sequence

Transcript ID

PGSC0003DMT400023143
Transcript Infomation

pacid=37457473 locus=PGSC0003DMG400008961 ID=PGSC0003DMT400023143.v4.03 annot-version=v4.03
Sequence

ATGAAGATCTCCAACTTCTTCATTTTCTCCTTCTTCTTAATCACAGGATTTTTGTGGGGT
GTTCGAGTTGAAGGTTTACGTCATCACCACCACCACCACCACCGTCACCAGAATAGCCAT
AATAACCCAAAAAGTTACAAAAATGACCAAAAAGATCACCAATTTTATAATTTTAAACCA
ACAAAAATGTTTGTATTTGGAGATTCATATGTTGATACTGGTAATAATAGAAAATCAATG
GCTAATTCTTGGAAACAACCTTATGGTCTCACTTTTCCCGGCAAGCCCTCCGGCAGGTTT
TCCGATGGACGTGTTCTCACCGATTACCTAGCAAAATTCTTGGGATTGAAGTCACCAGTA
CCATATAGATGGATGAAATATGCAACAAATAGGCTAAGATATGGAATTAATTTTGCCTAT
GGAGGAACTGGTGTTTTTAATACTACAGTCCCAGAGCCAAACATGACAACTCAAATTGAT
TTTTTCCAAAAATTAATGGCTGAATCAGTATACACAAAGGCAGATATTGAACAATCATTG
TTCTTGCTTTCTCTTGCTGGAAATGATTATGGTGCTTACCTTGCTAATGGTGGTACAGTT
CAGGATATTCCTGCCTTCATAACTAGTGTGGTAAACCAACTAGTTGTAAACATGAAAAGA
GTCAACAAATTAGGTGCCAAAAAGATAGCAGTGACAGCATTGGAACCATTAGGATGTCTT
CCACAAAGCACAATTTTGAATTCATTTCAACAATGCAATGCTACTGAGAATATTGCTGTG
GATCTTCACAATTCACTATTGCAACAAGCTGTGGCAAAATTGAACAATGAGACAATGGGT
TCAACTTTTGTGATTCTTGATCTTTTTAGCTCTTTCAACTCTGTGCTGGCAAGTAAAGGA
GTGCAAGGAAGCACGAGGTTCGAGACACCATTGAAGCCATGTTGTATGGGAATAAGCAAC
AAATATTCATGTGGAAGTATGAATGTTAAAGGTGAAAAGATGTATACAGTGTGCAATGAT
CCAAAATCTGCATTTTTTTGGGACACAGTTCATCCAACTGAAGCTGGATGGCATGCTGTT
TATACTAACTTGAAATCTACTCTCACTCAAAAAATCCTTTAG