Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023094
CDS Infomation

pacid=37457622 polypeptide=PGSC0003DMP400015736 locus=PGSC0003DMG400008945 ID=PGSC0003DMT400023094.v4.03 annot-version=v4.03
Sequence

ATGTCGAATAAGGAGAAAGGTGTAAATGTTCAGGTTTTGCTTCGTTGCAGGCCGTTTAGT
AATGATGAGTTGCGGAGTAATGCTCCGCAAGTGGTGACTTGCAATGAGTTTCAGAGAGAG
GTTGCTGTTTCACAGAACATTGCTGGAAAACACATAGATAGGATTTTTACTTTCGATAAG
GTTTTTGGCCCCTCTGCACAACAAAGGGACCTCTATGATCAAGCAATTATCCCCATTGTC
AATGAAGTTTTAGAGGGATTTAACTGTACAATTTTTGCTTATGGGCAAACTGGTACCGGC
AAAACTTACACTATGGAAGGTGAATGCAAGAGGTCCAAGAGTGGGCCTAACGGAGAGCTT
CCACTAGGAGCAGGTGTTATACCTAGAGCTGTCAAGCAAATTTTTGATACATTAGAGAGT
CAAAATGCAGAATACAGTGTGAAAGTTACATTCTTAGAGTTGTATAATGAAGAAATCACT
GACTTGTTAGCCCCTGAGGATTTGTCTAAAGTTGCTTTAGAAGACAGACAGAAGAAACAA
TTGCCACTCATGGAAGATGGGAAAGGTGGAGTTCTAGTTAGAGGGCTTGAAGAAGAAATT
GTGACAAGTGCCAGTGAGATATTCACCTTAATTGAAAGGGGTTCATCAAAACGCCGGACT
GCAGAAACCTTGCTCAATAAGCAATCAAGTCGGTCACATTCTCTTTTTTCCATCACAATA
CACATCAAGGAAGCAACCCCTGAAGGCGAAGAACTAATAAAATGTGGCAAGTTGAATTTA
GTTGATTTGGCTGGTTCAGAGAATATTTCTCGCTCTGGGGCTAGGGAGGGTCGTGCAAGG
GAAGCTGGAGAAATAAACAAAAGTTTACTCACACTTGGACGAGTGATTAATGCCCTTGTT
GAGCATCTTGGGCATATTCCTTACAGGGATAGCAAACTTACACGTTTGCTGCGTGATTCA
TTGGGAGGAAGAACCAAAACATGTATCATTGCCACAGTGTCACCTGCTGTGCACTGTCTT
GAGGAGACTCTGAGCACACTAGACTATGCCCACAGAGCAAAAAACATAAGGAATAAGCCT
GAGGTGAATCAAAAAATGATGAAATCAACCCTCATCAAGGATTTGTATGGAGAAATTGAG
CGGCTTAAAGGAGAGGTATATGCTGCTCGTGAGAAGAATGGTGTTTATATACCAAAAGAA
CGATATTATCAGGAGGAGAGCGAGAGAAAAGCAATGGCAGATCAAATTGAACAAATGGGA
GTAAGCATAGAAAACCAACAGAAGCAACTCGAGGAGTTACAAAGTAGACATGATTGTCAG
GTTCAACAGTGCTCAGATTTGACTTGTAAACTTGATGCAACACAGAAACAATTGAACCAA
ACAAGCAAATTGCTAGCCTACACTGAGGAACAGTTGAGACAAAATCTATACACTCTCAAG
GAGCGGGATTTTATCATCTCTGAACAAAAAAAAGCTGAAAATGCCCTGGCTCACCAAGCA
TGTGTTTTACGGGCTGACTTAGAGAAATCAATTCAAGAGAATGCTTCCTTGTTTCAAAAA
ATTGCTAGAGAGGATAAACTGAGCACTGATAATCGGTCAGTGGTAGACAACTTTCAAACT
GAGCTTGCAAAGCAACTTGGTAGTCTTTCCACCACTGTGGCAACATCAGTGTCTCGACAA
AATGAACACCTCCACCATGTCGAGAAAATCTGTCATAATTTTCTTGAATCACATGAGAAG
GCTGCCTTAGACTTGACGAATAAAATTCATTCTTCAAAGGCCTTGTACATATCTCACTTT
GAGGCTATGCAAAATGTAGTGAAGCTGCATAAAGCCACTGCTAATGCTGCTCTGGAGGAA
ATTTCATCTTTGGCTTCTTCTAATTCAATTTCCACTAAAGAATTTTTAGATGCAGAGTCT
GTTGAAGCAAATTTAATTTTTGATGAACTTCAGAGCACTCTGTCAACCCACCAAGGAGAA
ATGGCACATTTTGCTAGAGAGCTTCGTCAGAGATTTAATGACAGTACAGAGCATTTGACA
AATATCTCTGAGATCATACAAGGATTTTTTGACAAACTTTTAGAAGAATCAAAAAGACTT
GAAAGACATTCAACAACAGCTGATGAGATTCAAACGAAGTCTATTGCTGAATTTGAGAAG
GCATATGAGGAGCAATCAAGATCAGATGCAGAAAAGCTTATTGCTGAGGTGACTTCCTTG
GTCTCCAATCACATGCGTCGCCAAAAAGAACTGGTTGGTGCAAGGCTTGGTGATCTTAGA
GAAACTGTTTCTGGAAATAAGACATTCTTGGATGGGCATGTATCCTCTATGGAAGGTATT
ACAACAGATACAAAAAGAAAATGGCAGGACTTTTATACGCAAGCAGAAGGTGAGACCAAA
GAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGAATGGAGTTACTCATGCAGAAGTGT
GTAAGCACAACTGAAACCACTGTGAAACGGTTGCAAAGTACTCATGAATTGGCAAAAGAC
ATGGGCAATCAACATGTTTCAACAATGCATTCAGTTGTCAGGAACATATGCGATAGCAAT
GAGCAACATGTAATTGAATTTGATTCCACAAGGGAAGCTGCTGAAGAAGCTGTGAAAAGG
AATAGTGAAGATATCATTAAATCTATTGACGGCTTATCAGGGGAAGAGAGAGGATCTATA
TCTGGCATTTTGGATACTGCCAGTGCACACTCGGAGACCCTTGATGAACTTAAGAAAGAT
CATTGCACACAGTCTACCTCCATTGAACAGAAGGCCCTTGAAACATTTCAGCAGAAGTTT
ATGGATTATGAGCCAACTGGAACAACACCAATTAGGTCTGAGCCAGATGTACCAAGCAAG
GGAACAATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAGTTTCGAGAA
AACAATTCATTCGAGTCCTTCCAAGTAAAGGATTTAAAGCCATCACTTATACCACGATCT
CCTCTCTCACTGATTAACAATTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015736
PEP Infomation

pacid=37457622 transcript=PGSC0003DMT400023094 locus=PGSC0003DMG400008945 ID=PGSC0003DMT400023094.v4.03 annot-version=v4.03
Sequence

MSNKEKGVNVQVLLRCRPFSNDELRSNAPQVVTCNEFQREVAVSQNIAGKHIDRIFTFDK
VFGPSAQQRDLYDQAIIPIVNEVLEGFNCTIFAYGQTGTGKTYTMEGECKRSKSGPNGEL
PLGAGVIPRAVKQIFDTLESQNAEYSVKVTFLELYNEEITDLLAPEDLSKVALEDRQKKQ
LPLMEDGKGGVLVRGLEEEIVTSASEIFTLIERGSSKRRTAETLLNKQSSRSHSLFSITI
HIKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALV
EHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIRNKP
EVNQKMMKSTLIKDLYGEIERLKGEVYAAREKNGVYIPKERYYQEESERKAMADQIEQMG
VSIENQQKQLEELQSRHDCQVQQCSDLTCKLDATQKQLNQTSKLLAYTEEQLRQNLYTLK
ERDFIISEQKKAENALAHQACVLRADLEKSIQENASLFQKIAREDKLSTDNRSVVDNFQT
ELAKQLGSLSTTVATSVSRQNEHLHHVEKICHNFLESHEKAALDLTNKIHSSKALYISHF
EAMQNVVKLHKATANAALEEISSLASSNSISTKEFLDAESVEANLIFDELQSTLSTHQGE
MAHFARELRQRFNDSTEHLTNISEIIQGFFDKLLEESKRLERHSTTADEIQTKSIAEFEK
AYEEQSRSDAEKLIAEVTSLVSNHMRRQKELVGARLGDLRETVSGNKTFLDGHVSSMEGI
TTDTKRKWQDFYTQAEGETKENADFSAAKHCRMELLMQKCVSTTETTVKRLQSTHELAKD
MGNQHVSTMHSVVRNICDSNEQHVIEFDSTREAAEEAVKRNSEDIIKSIDGLSGEERGSI
SGILDTASAHSETLDELKKDHCTQSTSIEQKALETFQQKFMDYEPTGTTPIRSEPDVPSK
GTIESLRAMPMETLLEEFRENNSFESFQVKDLKPSLIPRSPLSLINN*

Transcript Sequence

Transcript ID

PGSC0003DMT400023094
Transcript Infomation

pacid=37457622 locus=PGSC0003DMG400008945 ID=PGSC0003DMT400023094.v4.03 annot-version=v4.03
Sequence

ATGTCGAATAAGGAGAAAGGTGTAAATGTTCAGGTTTTGCTTCGTTGCAGGCCGTTTAGT
AATGATGAGTTGCGGAGTAATGCTCCGCAAGTGGTGACTTGCAATGAGTTTCAGAGAGAG
GTTGCTGTTTCACAGAACATTGCTGGAAAACACATAGATAGGATTTTTACTTTCGATAAG
GTTTTTGGCCCCTCTGCACAACAAAGGGACCTCTATGATCAAGCAATTATCCCCATTGTC
AATGAAGTTTTAGAGGGATTTAACTGTACAATTTTTGCTTATGGGCAAACTGGTACCGGC
AAAACTTACACTATGGAAGGTGAATGCAAGAGGTCCAAGAGTGGGCCTAACGGAGAGCTT
CCACTAGGAGCAGGTGTTATACCTAGAGCTGTCAAGCAAATTTTTGATACATTAGAGAGT
CAAAATGCAGAATACAGTGTGAAAGTTACATTCTTAGAGTTGTATAATGAAGAAATCACT
GACTTGTTAGCCCCTGAGGATTTGTCTAAAGTTGCTTTAGAAGACAGACAGAAGAAACAA
TTGCCACTCATGGAAGATGGGAAAGGTGGAGTTCTAGTTAGAGGGCTTGAAGAAGAAATT
GTGACAAGTGCCAGTGAGATATTCACCTTAATTGAAAGGGGTTCATCAAAACGCCGGACT
GCAGAAACCTTGCTCAATAAGCAATCAAGTCGGTCACATTCTCTTTTTTCCATCACAATA
CACATCAAGGAAGCAACCCCTGAAGGCGAAGAACTAATAAAATGTGGCAAGTTGAATTTA
GTTGATTTGGCTGGTTCAGAGAATATTTCTCGCTCTGGGGCTAGGGAGGGTCGTGCAAGG
GAAGCTGGAGAAATAAACAAAAGTTTACTCACACTTGGACGAGTGATTAATGCCCTTGTT
GAGCATCTTGGGCATATTCCTTACAGGGATAGCAAACTTACACGTTTGCTGCGTGATTCA
TTGGGAGGAAGAACCAAAACATGTATCATTGCCACAGTGTCACCTGCTGTGCACTGTCTT
GAGGAGACTCTGAGCACACTAGACTATGCCCACAGAGCAAAAAACATAAGGAATAAGCCT
GAGGTGAATCAAAAAATGATGAAATCAACCCTCATCAAGGATTTGTATGGAGAAATTGAG
CGGCTTAAAGGAGAGGTATATGCTGCTCGTGAGAAGAATGGTGTTTATATACCAAAAGAA
CGATATTATCAGGAGGAGAGCGAGAGAAAAGCAATGGCAGATCAAATTGAACAAATGGGA
GTAAGCATAGAAAACCAACAGAAGCAACTCGAGGAGTTACAAAGTAGACATGATTGTCAG
GTTCAACAGTGCTCAGATTTGACTTGTAAACTTGATGCAACACAGAAACAATTGAACCAA
ACAAGCAAATTGCTAGCCTACACTGAGGAACAGTTGAGACAAAATCTATACACTCTCAAG
GAGCGGGATTTTATCATCTCTGAACAAAAAAAAGCTGAAAATGCCCTGGCTCACCAAGCA
TGTGTTTTACGGGCTGACTTAGAGAAATCAATTCAAGAGAATGCTTCCTTGTTTCAAAAA
ATTGCTAGAGAGGATAAACTGAGCACTGATAATCGGTCAGTGGTAGACAACTTTCAAACT
GAGCTTGCAAAGCAACTTGGTAGTCTTTCCACCACTGTGGCAACATCAGTGTCTCGACAA
AATGAACACCTCCACCATGTCGAGAAAATCTGTCATAATTTTCTTGAATCACATGAGAAG
GCTGCCTTAGACTTGACGAATAAAATTCATTCTTCAAAGGCCTTGTACATATCTCACTTT
GAGGCTATGCAAAATGTAGTGAAGCTGCATAAAGCCACTGCTAATGCTGCTCTGGAGGAA
ATTTCATCTTTGGCTTCTTCTAATTCAATTTCCACTAAAGAATTTTTAGATGCAGAGTCT
GTTGAAGCAAATTTAATTTTTGATGAACTTCAGAGCACTCTGTCAACCCACCAAGGAGAA
ATGGCACATTTTGCTAGAGAGCTTCGTCAGAGATTTAATGACAGTACAGAGCATTTGACA
AATATCTCTGAGATCATACAAGGATTTTTTGACAAACTTTTAGAAGAATCAAAAAGACTT
GAAAGACATTCAACAACAGCTGATGAGATTCAAACGAAGTCTATTGCTGAATTTGAGAAG
GCATATGAGGAGCAATCAAGATCAGATGCAGAAAAGCTTATTGCTGAGGTGACTTCCTTG
GTCTCCAATCACATGCGTCGCCAAAAAGAACTGGTTGGTGCAAGGCTTGGTGATCTTAGA
GAAACTGTTTCTGGAAATAAGACATTCTTGGATGGGCATGTATCCTCTATGGAAGGTATT
ACAACAGATACAAAAAGAAAATGGCAGGACTTTTATACGCAAGCAGAAGGTGAGACCAAA
GAAAATGCTGATTTCTCAGCTGCTAAACATTGCCGAATGGAGTTACTCATGCAGAAGTGT
GTAAGCACAACTGAAACCACTGTGAAACGGTTGCAAAGTACTCATGAATTGGCAAAAGAC
ATGGGCAATCAACATGTTTCAACAATGCATTCAGTTGTCAGGAACATATGCGATAGCAAT
GAGCAACATGTAATTGAATTTGATTCCACAAGGGAAGCTGCTGAAGAAGCTGTGAAAAGG
AATAGTGAAGATATCATTAAATCTATTGACGGCTTATCAGGGGAAGAGAGAGGATCTATA
TCTGGCATTTTGGATACTGCCAGTGCACACTCGGAGACCCTTGATGAACTTAAGAAAGAT
CATTGCACACAGTCTACCTCCATTGAACAGAAGGCCCTTGAAACATTTCAGCAGAAGTTT
ATGGATTATGAGCCAACTGGAACAACACCAATTAGGTCTGAGCCAGATGTACCAAGCAAG
GGAACAATTGAGTCGTTGCGAGCCATGCCAATGGAGACTCTACTAGAGGAGTTTCGAGAA
AACAATTCATTCGAGTCCTTCCAAGTAAAGGATTTAAAGCCATCACTTATACCACGATCT
CCTCTCTCACTGATTAACAATTAG