Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023082
CDS Infomation

pacid=37455532 polypeptide=PGSC0003DMP400015724 locus=PGSC0003DMG400008938 ID=PGSC0003DMT400023082.v4.03 annot-version=v4.03
Sequence

ATGGCGCCAAAATATACTTCCCTCATTTTCCTCTTCCTTCTCCTTAACTCTTTTTCATAC
TCTTTCGGAGGGGGTCATGACTATCATGACGCCCTCCGAAAGAGTATCCTCTTTTTCGAA
GGACAACGATCTGGAAAACTCCCTCCGGATCAACGTATCAAATGGCGTAGAGACTCCGCA
TTGCACGACGGTGCCTCCGCCGGAGTTGATTTGACAGGAGGTTATTACGATGCGGGAGAT
AATGTAAAATTTGTATTTCCAATGGCGTTTACAACGACATTGTTATCGTGGAGCATAATA
GACTTTAAAAGGAACATAGGGAACGAATTGGGGAACGCAGTGAAGGCGGTGAAATGGGGG
ACGGATTTTCTGTTAAAAGCGACGGCGAAGGAAGGAGTGATATATGTTCAAGTAGGTGAT
GCATTTTCAGATCATAGTTGTTGGGAGAGACCAGAAGATATGGATACTTTAAGAACTGTT
TATAAAATTGATGAGAATCATCCCGGTTCCGAAGTCGCCGGTGAAATCGCTGCTGCATTA
GCCGCTGCTTCCATTGTTTTCCGATCACTGGACTCTTCGTACTCAAATCTACTACTTGAT
CGCGCTGTTAAAGTTTTCGATTTTGCCAATAGGCATAGAGGTGCATACAGCTCCAGCCTA
CACTCTGCTGTTTGCCCTTTCTATTGTGACTTTGATGGTTACCAGGATGAATTGCTTTGG
GGTGCAGCATGGTTACACAAAGCAACAAGAAGAAGGCAATATAGAGAGTACATAGTGAAA
AATGAGGTTATTTTAAGAGCTGGAGATACAATTAATGAATTTGGTTGGGATAACAAACAT
GCTGGTATTAATGTTCTCATTTCCAAGGAAGTGTTAATGGGAAAAGCACCAGATCTAAAA
TCATTTCAAGTAAATGCAGATGCTTTCATTTGCTCAATATTACCTGGAATTTCTCATCCC
CAAGTTCAATATTCTCCAGGTGGACTCATTGTCAAACCTGGGGTTTGTAACATGCAGCAT
GTGACATCTTTGTCCTTCCTACTCTTAACTTATTCTAATTATCTTAGTCATGCCAATCAT
GTTGTGCCATGTGGTTCCATGACAGCCACCCCTGCCCTCCTCAAACACATTGCCAAACGT
CAGGTGGATTATATTCTTGGAGATAATCCTCAAAGAATGTCATATATGGTAGGGTATGGT
CCACATTACCCACTAAGGATTCACCATAGGGGCAGCTCAGTACCATCTGTGGCCGCACAT
TCAGCACGTATAGGTTGCAAAGAAGGATCGCACTACTTTTTTTCACCCAATCCAAATCCA
AATCGCTTAATTGGCGCTGTTGTTGGGGGGCCAAATTTAACAGATTCGTTCCCAGACGCG
AGGCCCTTTTTTCAAGAATCTGAGCCCACAACATATGTTAATGCACCATTGGTGGGCCTA
TTGGCTTACTTTTCAGCCCATCCTAATTGA

Peptide Sequence

PEP ID

PGSC0003DMP400015724
PEP Infomation

pacid=37455532 transcript=PGSC0003DMT400023082 locus=PGSC0003DMG400008938 ID=PGSC0003DMT400023082.v4.03 annot-version=v4.03
Sequence

MAPKYTSLIFLFLLLNSFSYSFGGGHDYHDALRKSILFFEGQRSGKLPPDQRIKWRRDSA
LHDGASAGVDLTGGYYDAGDNVKFVFPMAFTTTLLSWSIIDFKRNIGNELGNAVKAVKWG
TDFLLKATAKEGVIYVQVGDAFSDHSCWERPEDMDTLRTVYKIDENHPGSEVAGEIAAAL
AAASIVFRSLDSSYSNLLLDRAVKVFDFANRHRGAYSSSLHSAVCPFYCDFDGYQDELLW
GAAWLHKATRRRQYREYIVKNEVILRAGDTINEFGWDNKHAGINVLISKEVLMGKAPDLK
SFQVNADAFICSILPGISHPQVQYSPGGLIVKPGVCNMQHVTSLSFLLLTYSNYLSHANH
VVPCGSMTATPALLKHIAKRQVDYILGDNPQRMSYMVGYGPHYPLRIHHRGSSVPSVAAH
SARIGCKEGSHYFFSPNPNPNRLIGAVVGGPNLTDSFPDARPFFQESEPTTYVNAPLVGL
LAYFSAHPN*

Transcript Sequence

Transcript ID

PGSC0003DMT400023082
Transcript Infomation

pacid=37455532 locus=PGSC0003DMG400008938 ID=PGSC0003DMT400023082.v4.03 annot-version=v4.03
Sequence

ATGGCGCCAAAATATACTTCCCTCATTTTCCTCTTCCTTCTCCTTAACTCTTTTTCATAC
TCTTTCGGAGGGGGTCATGACTATCATGACGCCCTCCGAAAGAGTATCCTCTTTTTCGAA
GGACAACGATCTGGAAAACTCCCTCCGGATCAACGTATCAAATGGCGTAGAGACTCCGCA
TTGCACGACGGTGCCTCCGCCGGAGTTGATTTGACAGGAGGTTATTACGATGCGGGAGAT
AATGTAAAATTTGTATTTCCAATGGCGTTTACAACGACATTGTTATCGTGGAGCATAATA
GACTTTAAAAGGAACATAGGGAACGAATTGGGGAACGCAGTGAAGGCGGTGAAATGGGGG
ACGGATTTTCTGTTAAAAGCGACGGCGAAGGAAGGAGTGATATATGTTCAAGTAGGTGAT
GCATTTTCAGATCATAGTTGTTGGGAGAGACCAGAAGATATGGATACTTTAAGAACTGTT
TATAAAATTGATGAGAATCATCCCGGTTCCGAAGTCGCCGGTGAAATCGCTGCTGCATTA
GCCGCTGCTTCCATTGTTTTCCGATCACTGGACTCTTCGTACTCAAATCTACTACTTGAT
CGCGCTGTTAAAGTTTTCGATTTTGCCAATAGGCATAGAGGTGCATACAGCTCCAGCCTA
CACTCTGCTGTTTGCCCTTTCTATTGTGACTTTGATGGTTACCAGGATGAATTGCTTTGG
GGTGCAGCATGGTTACACAAAGCAACAAGAAGAAGGCAATATAGAGAGTACATAGTGAAA
AATGAGGTTATTTTAAGAGCTGGAGATACAATTAATGAATTTGGTTGGGATAACAAACAT
GCTGGTATTAATGTTCTCATTTCCAAGGAAGTGTTAATGGGAAAAGCACCAGATCTAAAA
TCATTTCAAGTAAATGCAGATGCTTTCATTTGCTCAATATTACCTGGAATTTCTCATCCC
CAAGTTCAATATTCTCCAGGTGGACTCATTGTCAAACCTGGGGTTTGTAACATGCAGCAT
GTGACATCTTTGTCCTTCCTACTCTTAACTTATTCTAATTATCTTAGTCATGCCAATCAT
GTTGTGCCATGTGGTTCCATGACAGCCACCCCTGCCCTCCTCAAACACATTGCCAAACGT
CAGGTGGATTATATTCTTGGAGATAATCCTCAAAGAATGTCATATATGGTAGGGTATGGT
CCACATTACCCACTAAGGATTCACCATAGGGGCAGCTCAGTACCATCTGTGGCCGCACAT
TCAGCACGTATAGGTTGCAAAGAAGGATCGCACTACTTTTTTTCACCCAATCCAAATCCA
AATCGCTTAATTGGCGCTGTTGTTGGGGGGCCAAATTTAACAGATTCGTTCCCAGACGCG
AGGCCCTTTTTTCAAGAATCTGAGCCCACAACATATGTTAATGCACCATTGGTGGGCCTA
TTGGCTTACTTTTCAGCCCATCCTAATTGA