Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023078
CDS Infomation

pacid=37458673 polypeptide=PGSC0003DMP400015722 locus=PGSC0003DMG400008936 ID=PGSC0003DMT400023078.v4.03 annot-version=v4.03
Sequence

ATGTTTGAGTTTAACCTTAACAACAACATGAGCAACAATACTCATAATGAACATGATGAT
GAGCTAGGACAAAGTGAAGACAAATTGGAAGAAATTCCAAGAGATCATTTGTTTGAGAAA
CCATTAACTCCAAGTGATGTTGGAAAGCTTAACAGGTTAGTAATCCCTAAACAGCACGCT
GAGAAGTATTTTCCTCTCAGCGGTAATAATAATAATAATACTAATAATAACGATGGCGGT
ACTGAAAAGGGATTATTACTGAGTTTCGAAGATGAGTCAGGAAAATCATGGAGATTTCGA
TATTCTTATTGGAATAGTAGCCAGAGCTATGTATTGACTAAAGGTTGGAGCCGTTTTGTC
AAGGAAAAACGTCTTGATGCTGGTGATATTGTTTTGTTTGACCGACACCGGTCAGAATCT
GACCGGTTATTTATAGGGTGGAGGCGGAGAAATACTGTCTCCGCCTCCACCTCCATCTCC
ACTCCTGCTGCAGTTCATAACACTGCAGCAGCGGCGGTGACTCGAAATATGGGTGGTGGT
GGAGGTGGAGGTGGGTGGGCCCACGTATACTACGGTGGGCATCCTTATCCAAGCGCAGGT
GCAGGTCTTCTATACCAACCTGACTGTCTTCATGCAGGGGGAGGAGCAATGCCGAACCAA
ACAACAAGTGTGAACAATAACACAAGAAGACACGTGAGGTTGTTTGGGGTTAACTTGGAA
TGTGAGGCCGATGATTCATCGTGGTCGGAGCCACCCCCGACTCCAGATGGTGGTGGCTCT
TCTACATCGAGCCACAACCAGGATCATGGTCGGAGTCAGGATCAAGCTAGCCAACACTAT
TATCAATACCAATTTCAGTATTCAAAGCCTCATGTTACTGTTTCAGCTGCTGCTTCTTCC
TATAATAATAACCATCACAATCACAAGGATATGAGTTTCTCAAGAGATGTCAACCAGATG
AGATATCACCAGGGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400015722
PEP Infomation

pacid=37458673 transcript=PGSC0003DMT400023078 locus=PGSC0003DMG400008936 ID=PGSC0003DMT400023078.v4.03 annot-version=v4.03
Sequence

MFEFNLNNNMSNNTHNEHDDELGQSEDKLEEIPRDHLFEKPLTPSDVGKLNRLVIPKQHA
EKYFPLSGNNNNNTNNNDGGTEKGLLLSFEDESGKSWRFRYSYWNSSQSYVLTKGWSRFV
KEKRLDAGDIVLFDRHRSESDRLFIGWRRRNTVSASTSISTPAAVHNTAAAAVTRNMGGG
GGGGGWAHVYYGGHPYPSAGAGLLYQPDCLHAGGGAMPNQTTSVNNNTRRHVRLFGVNLE
CEADDSSWSEPPPTPDGGGSSTSSHNQDHGRSQDQASQHYYQYQFQYSKPHVTVSAAASS
YNNNHHNHKDMSFSRDVNQMRYHQG*

Transcript Sequence

Transcript ID

PGSC0003DMT400023078
Transcript Infomation

pacid=37458673 locus=PGSC0003DMG400008936 ID=PGSC0003DMT400023078.v4.03 annot-version=v4.03
Sequence

ATGTTTGAGTTTAACCTTAACAACAACATGAGCAACAATACTCATAATGAACATGATGAT
GAGCTAGGACAAAGTGAAGACAAATTGGAAGAAATTCCAAGAGATCATTTGTTTGAGAAA
CCATTAACTCCAAGTGATGTTGGAAAGCTTAACAGGTTAGTAATCCCTAAACAGCACGCT
GAGAAGTATTTTCCTCTCAGCGGTAATAATAATAATAATACTAATAATAACGATGGCGGT
ACTGAAAAGGGATTATTACTGAGTTTCGAAGATGAGTCAGGAAAATCATGGAGATTTCGA
TATTCTTATTGGAATAGTAGCCAGAGCTATGTATTGACTAAAGGTTGGAGCCGTTTTGTC
AAGGAAAAACGTCTTGATGCTGGTGATATTGTTTTGTTTGACCGACACCGGTCAGAATCT
GACCGGTTATTTATAGGGTGGAGGCGGAGAAATACTGTCTCCGCCTCCACCTCCATCTCC
ACTCCTGCTGCAGTTCATAACACTGCAGCAGCGGCGGTGACTCGAAATATGGGTGGTGGT
GGAGGTGGAGGTGGGTGGGCCCACGTATACTACGGTGGGCATCCTTATCCAAGCGCAGGT
GCAGGTCTTCTATACCAACCTGACTGTCTTCATGCAGGGGGAGGAGCAATGCCGAACCAA
ACAACAAGTGTGAACAATAACACAAGAAGACACGTGAGGTTGTTTGGGGTTAACTTGGAA
TGTGAGGCCGATGATTCATCGTGGTCGGAGCCACCCCCGACTCCAGATGGTGGTGGCTCT
TCTACATCGAGCCACAACCAGGATCATGGTCGGAGTCAGGATCAAGCTAGCCAACACTAT
TATCAATACCAATTTCAGTATTCAAAGCCTCATGTTACTGTTTCAGCTGCTGCTTCTTCC
TATAATAATAACCATCACAATCACAAGGATATGAGTTTCTCAAGAGATGTCAACCAGATG
AGATATCACCAGGGATAA