Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023027
CDS Infomation

pacid=37456159 polypeptide=PGSC0003DMP400015684 locus=PGSC0003DMG400008912 ID=PGSC0003DMT400023027.v4.03 annot-version=v4.03
Sequence

ATGGCTGACGTTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACTGGCATGGTTAAG
GCAGGATTTGCTGGAGATGATGCACCTAGGGCTGTATTTCCTAGCATTGTTGGGCGTCCG
CGTCATGCTGGAGTGATGGTAGGAATGGGACAGAAGGATGCATATGTTGGTGATGAGGCT
CAGTCGAAACGTGGTATTCTTACACTGAAGTATCCAATTGAACATGGCATAGTGAATAAT
TGGGATGACATGGAAAAGATTTGGCATCATACGTTCTATAATGAACTTCGAGTTGCTCCA
GAAGAACATCCTGTTCTGCTTACTGAAGCACCTCTCAACCCTAAGGCTAATCGCGAGAAA
ATGACTCAGATAATGTTTGAAACATTCAATGCCCCAGCAATGTATGTTGCTATCCAAGCT
GTTCTGTCTTTGTATGCTAGTGGACGTACAACTGGTATTGTGCTGGATTCTGGAGATGGT
GTGAGCCACACAGTTCCTATATATGAAGGTTATGCACTACCTCATGCCATCCTACGTCTC
GACCTTGCTGGTCGTGACCTTACTGAGTACATGGTGAAGATTCTTACTGAACGCGGATAC
TCCTTCACTACTACTGCTGAGAAGGAAATTGTAAGGGATGTGAAGGAGAAATTGGCATAC
CTTGCTCTTGATTTTGAGCAAGAACTTGAGACAACCAAGACAGGCTCTGCTGTTGAGAAG
AACTATGAACTGCCCGATGGACAAGTGATTACTATTGGTGCTGAGCGTTTTCGATGTCCT
GAAGTTCTTTATCAACCTTCTTTGATTGGAATGGAAGCTGCTGGAATTCATGAGACGACG
TATAATTCTATAATGAAGTGTGATGTTGATATTAGAAAGGATTTGTATGGGAACATTGTG
CTTAGCGGTGGGTCAACTATGTTTCCTGGCATTGCTGATAGAATGAGCAAGGAAATTCAA
GCCTTAGCACCAAGTAGCATGAAGATCAAAGTGGTTGCTCCTCCTGAAAGGAAGTATAGT
GTCTGGATTGGAGGTTCAATTTTGGCATCCCTCAGTACCTTCCAACAGATGTGGATTGCT
AAAGCAGAGTATGATGAGTCTGGCCCCTCCATTGTGCATAGAAAGTGCTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015684
PEP Infomation

pacid=37456159 transcript=PGSC0003DMT400023027 locus=PGSC0003DMG400008912 ID=PGSC0003DMT400023027.v4.03 annot-version=v4.03
Sequence

MADVEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHAGVMVGMGQKDAYVGDEA
QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
DLAGRDLTEYMVKILTERGYSFTTTAEKEIVRDVKEKLAYLALDFEQELETTKTGSAVEK
NYELPDGQVITIGAERFRCPEVLYQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIV
LSGGSTMFPGIADRMSKEIQALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIA
KAEYDESGPSIVHRKCF*

Transcript Sequence

Transcript ID

PGSC0003DMT400023027
Transcript Infomation

pacid=37456159 locus=PGSC0003DMG400008912 ID=PGSC0003DMT400023027.v4.03 annot-version=v4.03
Sequence

ATGGCTGACGTTGAGGATATTCAACCTCTTGTTTGTGACAATGGAACTGGCATGGTTAAG
GCAGGATTTGCTGGAGATGATGCACCTAGGGCTGTATTTCCTAGCATTGTTGGGCGTCCG
CGTCATGCTGGAGTGATGGTAGGAATGGGACAGAAGGATGCATATGTTGGTGATGAGGCT
CAGTCGAAACGTGGTATTCTTACACTGAAGTATCCAATTGAACATGGCATAGTGAATAAT
TGGGATGACATGGAAAAGATTTGGCATCATACGTTCTATAATGAACTTCGAGTTGCTCCA
GAAGAACATCCTGTTCTGCTTACTGAAGCACCTCTCAACCCTAAGGCTAATCGCGAGAAA
ATGACTCAGATAATGTTTGAAACATTCAATGCCCCAGCAATGTATGTTGCTATCCAAGCT
GTTCTGTCTTTGTATGCTAGTGGACGTACAACTGGTATTGTGCTGGATTCTGGAGATGGT
GTGAGCCACACAGTTCCTATATATGAAGGTTATGCACTACCTCATGCCATCCTACGTCTC
GACCTTGCTGGTCGTGACCTTACTGAGTACATGGTGAAGATTCTTACTGAACGCGGATAC
TCCTTCACTACTACTGCTGAGAAGGAAATTGTAAGGGATGTGAAGGAGAAATTGGCATAC
CTTGCTCTTGATTTTGAGCAAGAACTTGAGACAACCAAGACAGGCTCTGCTGTTGAGAAG
AACTATGAACTGCCCGATGGACAAGTGATTACTATTGGTGCTGAGCGTTTTCGATGTCCT
GAAGTTCTTTATCAACCTTCTTTGATTGGAATGGAAGCTGCTGGAATTCATGAGACGACG
TATAATTCTATAATGAAGTGTGATGTTGATATTAGAAAGGATTTGTATGGGAACATTGTG
CTTAGCGGTGGGTCAACTATGTTTCCTGGCATTGCTGATAGAATGAGCAAGGAAATTCAA
GCCTTAGCACCAAGTAGCATGAAGATCAAAGTGGTTGCTCCTCCTGAAAGGAAGTATAGT
GTCTGGATTGGAGGTTCAATTTTGGCATCCCTCAGTACCTTCCAACAGATGTGGATTGCT
AAAGCAGAGTATGATGAGTCTGGCCCCTCCATTGTGCATAGAAAGTGCTTCTAA