Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400023012
CDS Infomation

pacid=37457654 polypeptide=PGSC0003DMP400015671 locus=PGSC0003DMG400008908 ID=PGSC0003DMT400023012.v4.03 annot-version=v4.03
Sequence

ATGGATGAATTGAAAGTAGAAGAGTGCTGTACTGAGAATAAGCAATCAGCTGCTGCTTCG
AGTTCGTCGGTTTCTGAAAATAGTGGTAGTGTTACTTTAAGGTCACCAGCAGTATCTAGC
CCAACCCCTGCATCACCAACTCACAGGAGAACCACTGGTCCAATAAGGCGAGCAAAGGGT
GGTTGGACTCCTGAGGAGGATGATACTTTGAAAAGGGCTGTTTCAGTTTACAGAGGGAAA
TGTTGGAAGAAAATAGCTGAGTTCTTCCCGGATAGATCGGAAGTGCAATGTCTGCATCGC
TGGCAGAAGGTCATCAATCCAGAACTTGTTAAAGGACCCTGGACTCGGGAGGAGGATGAT
AAGATCATTGAACTGGTTGCTAAGTATGGGCCTATAAAATGGTCTGTCATAGCTAAATCA
TTGACTGGTCGAATAGGGAAGCAGTGTCGTGAGAGATGGCACAATCATTTGAATCCCAAT
ATCAAAAAAGATGCTTGGACTCTGGAGGAGGAACGGGCGCTTATAGATGCTCATCGGATC
CATGGTAACAAGTGGGCTGAAATTGCTAAAGTTCTGCCAGGAAGGACTGATAATGGTATC
AAGAATCATTGGAACAGCTCCTTGAAGAAGAAGTTAGACTTTTATGTAGCTACTGGAAAT
CTTCCACCTTCTACTGGAACAGCTAAAGCTGAAGAGTTGCTAGTTTGGTCAAATAAAACA
TTAGAAGGAGCTGAAGTAGCTTCATCAGGAACTACAGATACATGTAAAATAGAAAATGGA
TGGCAGGTGGCAGAAATCAGTGCTTCCAATGGTGGTCCTCAAACTGAGTCCACTGATTCT
GAAGTCGTCAGGTTGGAATCTCAGTCACCAGAAGAAGATGCTATTCAACACATCAAACCA
AGTACTCAATCAGAAAACAGGTATGAAGGATGGAACATAGATAGTGCAGTAGGCAGATTA
CAAGTTTTTGAAGCACCATTTCCTTGTGAAATCCCTACATGTGGTATGTTATGCTATGAA
CCACCAAGGTCAGAAAGCTGTATTCCGCTGGATTCAGATCTTCTAAATATCTGCCGGGCA
CAATGTGAATCTGATGCAAGTCCAAGCCCATCACCAAATGGTTTCTTCACTCCACCTAGT
ACAAAGGGCCGTAGCCTATGTGCACAAACTCCTGAATCTGTACTGAGAATTGCTGCTAGA
AGCTTCCCAAATACACCTTCCATATTAAGGAAAAGAAAGACTCAAGGTGAACTTTCAACG
CCAACTAATAAAATGGGGAAGTCAGATGGAGATCTCTGTAGGGAAAAACCAATTGATGCG
TGTGACGAGATCCAATATGACAGCTCACACAAATCTAGCATGCATAATGGAGTTTCTTCA
AGAAATTCTTTCAATGGTGGTCTGTACAACAGTCAAGCATTTAATGCCTCTCCTCCATAT
CGATTAAGGTCTAAACGGACATCTATCTTTAAGTCTGTGGAGAAGCAGCTTCAGTTTGCA
CTCAACAAAGAGAAGCATGATACAAGTAATGGGTTCAGTGATTCAACTGTTAATGAGATA
TCACATGCATCCAAAGATTGTTCACAGGATACAGATAAGAAGGTGGAATAA

Peptide Sequence

PEP ID

PGSC0003DMP400015671
PEP Infomation

pacid=37457654 transcript=PGSC0003DMT400023012 locus=PGSC0003DMG400008908 ID=PGSC0003DMT400023012.v4.03 annot-version=v4.03
Sequence

MDELKVEECCTENKQSAAASSSSVSENSGSVTLRSPAVSSPTPASPTHRRTTGPIRRAKG
GWTPEEDDTLKRAVSVYRGKCWKKIAEFFPDRSEVQCLHRWQKVINPELVKGPWTREEDD
KIIELVAKYGPIKWSVIAKSLTGRIGKQCRERWHNHLNPNIKKDAWTLEEERALIDAHRI
HGNKWAEIAKVLPGRTDNGIKNHWNSSLKKKLDFYVATGNLPPSTGTAKAEELLVWSNKT
LEGAEVASSGTTDTCKIENGWQVAEISASNGGPQTESTDSEVVRLESQSPEEDAIQHIKP
STQSENRYEGWNIDSAVGRLQVFEAPFPCEIPTCGMLCYEPPRSESCIPLDSDLLNICRA
QCESDASPSPSPNGFFTPPSTKGRSLCAQTPESVLRIAARSFPNTPSILRKRKTQGELST
PTNKMGKSDGDLCREKPIDACDEIQYDSSHKSSMHNGVSSRNSFNGGLYNSQAFNASPPY
RLRSKRTSIFKSVEKQLQFALNKEKHDTSNGFSDSTVNEISHASKDCSQDTDKKVE*

Transcript Sequence

Transcript ID

PGSC0003DMT400023012
Transcript Infomation

pacid=37457654 locus=PGSC0003DMG400008908 ID=PGSC0003DMT400023012.v4.03 annot-version=v4.03
Sequence

ATGGATGAATTGAAAGTAGAAGAGTGCTGTACTGAGAATAAGCAATCAGCTGCTGCTTCG
AGTTCGTCGGTTTCTGAAAATAGTGGTAGTGTTACTTTAAGGTCACCAGCAGTATCTAGC
CCAACCCCTGCATCACCAACTCACAGGAGAACCACTGGTCCAATAAGGCGAGCAAAGGGT
GGTTGGACTCCTGAGGAGGATGATACTTTGAAAAGGGCTGTTTCAGTTTACAGAGGGAAA
TGTTGGAAGAAAATAGCTGAGTTCTTCCCGGATAGATCGGAAGTGCAATGTCTGCATCGC
TGGCAGAAGGTCATCAATCCAGAACTTGTTAAAGGACCCTGGACTCGGGAGGAGGATGAT
AAGATCATTGAACTGGTTGCTAAGTATGGGCCTATAAAATGGTCTGTCATAGCTAAATCA
TTGACTGGTCGAATAGGGAAGCAGTGTCGTGAGAGATGGCACAATCATTTGAATCCCAAT
ATCAAAAAAGATGCTTGGACTCTGGAGGAGGAACGGGCGCTTATAGATGCTCATCGGATC
CATGGTAACAAGTGGGCTGAAATTGCTAAAGTTCTGCCAGGAAGGACTGATAATGGTATC
AAGAATCATTGGAACAGCTCCTTGAAGAAGAAGTTAGACTTTTATGTAGCTACTGGAAAT
CTTCCACCTTCTACTGGAACAGCTAAAGCTGAAGAGTTGCTAGTTTGGTCAAATAAAACA
TTAGAAGGAGCTGAAGTAGCTTCATCAGGAACTACAGATACATGTAAAATAGAAAATGGA
TGGCAGGTGGCAGAAATCAGTGCTTCCAATGGTGGTCCTCAAACTGAGTCCACTGATTCT
GAAGTCGTCAGGTTGGAATCTCAGTCACCAGAAGAAGATGCTATTCAACACATCAAACCA
AGTACTCAATCAGAAAACAGGTATGAAGGATGGAACATAGATAGTGCAGTAGGCAGATTA
CAAGTTTTTGAAGCACCATTTCCTTGTGAAATCCCTACATGTGGTATGTTATGCTATGAA
CCACCAAGGTCAGAAAGCTGTATTCCGCTGGATTCAGATCTTCTAAATATCTGCCGGGCA
CAATGTGAATCTGATGCAAGTCCAAGCCCATCACCAAATGGTTTCTTCACTCCACCTAGT
ACAAAGGGCCGTAGCCTATGTGCACAAACTCCTGAATCTGTACTGAGAATTGCTGCTAGA
AGCTTCCCAAATACACCTTCCATATTAAGGAAAAGAAAGACTCAAGGTGAACTTTCAACG
CCAACTAATAAAATGGGGAAGTCAGATGGAGATCTCTGTAGGGAAAAACCAATTGATGCG
TGTGACGAGATCCAATATGACAGCTCACACAAATCTAGCATGCATAATGGAGTTTCTTCA
AGAAATTCTTTCAATGGTGGTCTGTACAACAGTCAAGCATTTAATGCCTCTCCTCCATAT
CGATTAAGGTCTAAACGGACATCTATCTTTAAGTCTGTGGAGAAGCAGCTTCAGTTTGCA
CTCAACAAAGAGAAGCATGATACAAGTAATGGGTTCAGTGATTCAACTGTTAATGAGATA
TCACATGCATCCAAAGATTGTTCACAGGATACAGATAAGAAGGTGGAATAA