Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022997
CDS Infomation

pacid=37458169 polypeptide=PGSC0003DMP400015662 locus=PGSC0003DMG400008904 ID=PGSC0003DMT400022997.v4.03 annot-version=v4.03
Sequence

ATGGATCCGAGGTTTAATGGACATCCGAGTTCTTTGAATAATTTTCGATTTGGGAACCAA
CCATTACCTTTTTCTTCAGAGCAGAGGATGATTAATGGACCAAGATTTGGACTTATTTAT
TCAGATCAGAATCTACTCAATGGTCCTAGACTTGAAAATAACTTTGTCCAACACGATTTT
GGTGCTGTTGGATTTATAAGTGGTGACCATTTACCTACTAATGTAGAATCAAGAACTGAC
CTTGGCGTTGAGAACGACTTCAATGAAGATATTGATTTCTCGGATGCAGTGTTGAGCTAT
ATAAATCGGATGCTAATGGAAGAAGACATGGAGGACAAGACAGATATGCTTCAGGAGTCC
TTGGAACTTCAAGCTAAAGAGAAGTCACTCTATGAGGCCCTTGGTAAGAAGTATCCACTA
TCACCGGAGCAAAACGTGTTTACTGATCGGAACAGTGAGAGTCCTGATGACTACTTTGCA
GGAAGTATATACAATTCCACAAGTAATACTGGGGGCAGTAGTGGTTACCTAATCGATCCA
AGGGGGGTTAACATTTCCACTGACTGCAATTCTTCTTACTTCGAAGGCCTTTCATTTCAT
AATACTTCTTCAGTATGCTCATCAAATAGTGGGAGTAATGTTGTCGATGGATTCTTAGAC
TCTCCTGTTAGTTCTTTTCATATTCCTGATATATATGATGAGAGTCAATCTATTTTGAAC
TTTCAGAAAGGAGTTGAAGAAGCAAGTAAGTTCCTCCCGACTAGTAATAAGTTGTTGAAC
AGTGTAGATATAAATGACTTGCCATCTCGGGAGCCCCAAAGGCAAGCTGGTTATGCAGCT
GCTCAGGTGGAGGAAAAGGATGAGGGAGAGACTTCACCAACTGAGGTGAGAGGGAAGAAA
AATCCTCTGAGGGGTGATAATAATATCGAAGGAGAAAGGAGTAGTAAACAGGCTGCGGTT
TTTACTGAATCAACTCTACGATCGGAGGAGTTTGATATCGTCTTGCTGAATAGCATGGGG
AAGGGAGGAGAAGCACTAGAAGCTTATCGACAAAACCTGAGGAATGCTAAAAGCAAAACC
ACAGTGCAGATATCAAAAGGATCAAAAGGAGGAAAGGGCCGAGGGAAGAAACAGGGCGGA
AAGAAGGAAGTCATAGATTTGAGAACTCTCATGATAAATTGCGCACAGGCTGTTGCTGCT
GACGATTCCAGGATTGCATATGAACTTTTGAAACAAATAAGACAACATTCATCCCCATTT
GGAGATGGAAACCAGAGATTGGCTCATTGCTTTGCAGATGGTCTCGAGGCGCGTTTGGCT
GGTACTGGTAGCCAGATATATAAAGCTCTTGTCAATAAACGAACATCTGCAGCTGATCTT
TTGAAGGCCTACCATTTGTATCTCGCATCTAGCCCATTCAGAAAGATCTCAAGTTTTGCT
TCAAACAAGACAATCATGATAAAGGCAGAGAATGCAACAAGGGTTCATGTTATTGACTTT
GGCATCCTGTATGGTTTCCAATGGCCTACATTCATCCAACGTATTGCAGAAAGAGAAGGG
GGGCCACCAAGGCTTCGTATTACTGGCATAGAGTTTCCCCAACCAGGCTTCAGGCCAGCG
GAACGGATTGAGGAAACAGGTCGCCGTTTGGCTGATTATGCTCGATCCTTTAATGTTCCA
TTTGAATACCATGCAATTGCAAAGAAATGGGAGAGCATTACAGTTGAGGATCTAAAACTC
GACAAAGATGAATTTCTTGCTGTCAACTGCTTGTATCGTTTTAAGAACCTGCATGATGAG
ACTATTGCAGTTGAAAGTTCAAGAACTATCGTTCTCAACCTCGTAAGGAAGATCAATCCA
GATATTTTCGTCCATGGTATTGTCAATGGGGCCTATAGTGCCCCATTTTTTGTCACACGG
TTTCGTGAGGCCTTATTCCACTTTTCTGCACTTTTTGATATGCTTGAAACTATTGTTCCC
CGTGAGATTCCAGAAAGACGATTAATTGAGAGAGAGATATTTGGGAGGGAAGCACTGAAT
GTCATAGCTTGTGAGGGGTGGGAAAGAGTTGAACGACCAGAGACATACAAGCAGTGGCAA
GCTCGTATTATGGGGGCAAGGTTTACGCAGATACCTTTTGACCGGGAGGAATTCGTGAAT
AAGGCAATAGAGAAAGTGAGGTTAGGATATCATAGAGACTTTGTAATCGATGAAGATAGC
CAGTGGTTGTTGCTGGGGTGGAAAGGAAGAACAATTTACGCCTTATCTTGTTGGAAACCT
GTGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015662
PEP Infomation

pacid=37458169 transcript=PGSC0003DMT400022997 locus=PGSC0003DMG400008904 ID=PGSC0003DMT400022997.v4.03 annot-version=v4.03
Sequence

MDPRFNGHPSSLNNFRFGNQPLPFSSEQRMINGPRFGLIYSDQNLLNGPRLENNFVQHDF
GAVGFISGDHLPTNVESRTDLGVENDFNEDIDFSDAVLSYINRMLMEEDMEDKTDMLQES
LELQAKEKSLYEALGKKYPLSPEQNVFTDRNSESPDDYFAGSIYNSTSNTGGSSGYLIDP
RGVNISTDCNSSYFEGLSFHNTSSVCSSNSGSNVVDGFLDSPVSSFHIPDIYDESQSILN
FQKGVEEASKFLPTSNKLLNSVDINDLPSREPQRQAGYAAAQVEEKDEGETSPTEVRGKK
NPLRGDNNIEGERSSKQAAVFTESTLRSEEFDIVLLNSMGKGGEALEAYRQNLRNAKSKT
TVQISKGSKGGKGRGKKQGGKKEVIDLRTLMINCAQAVAADDSRIAYELLKQIRQHSSPF
GDGNQRLAHCFADGLEARLAGTGSQIYKALVNKRTSAADLLKAYHLYLASSPFRKISSFA
SNKTIMIKAENATRVHVIDFGILYGFQWPTFIQRIAEREGGPPRLRITGIEFPQPGFRPA
ERIEETGRRLADYARSFNVPFEYHAIAKKWESITVEDLKLDKDEFLAVNCLYRFKNLHDE
TIAVESSRTIVLNLVRKINPDIFVHGIVNGAYSAPFFVTRFREALFHFSALFDMLETIVP
REIPERRLIEREIFGREALNVIACEGWERVERPETYKQWQARIMGARFTQIPFDREEFVN
KAIEKVRLGYHRDFVIDEDSQWLLLGWKGRTIYALSCWKPV*

Transcript Sequence

Transcript ID

PGSC0003DMT400022997
Transcript Infomation

pacid=37458169 locus=PGSC0003DMG400008904 ID=PGSC0003DMT400022997.v4.03 annot-version=v4.03
Sequence

ATGGATCCGAGGTTTAATGGACATCCGAGTTCTTTGAATAATTTTCGATTTGGGAACCAA
CCATTACCTTTTTCTTCAGAGCAGAGGATGATTAATGGACCAAGATTTGGACTTATTTAT
TCAGATCAGAATCTACTCAATGGTCCTAGACTTGAAAATAACTTTGTCCAACACGATTTT
GGTGCTGTTGGATTTATAAGTGGTGACCATTTACCTACTAATGTAGAATCAAGAACTGAC
CTTGGCGTTGAGAACGACTTCAATGAAGATATTGATTTCTCGGATGCAGTGTTGAGCTAT
ATAAATCGGATGCTAATGGAAGAAGACATGGAGGACAAGACAGATATGCTTCAGGAGTCC
TTGGAACTTCAAGCTAAAGAGAAGTCACTCTATGAGGCCCTTGGTAAGAAGTATCCACTA
TCACCGGAGCAAAACGTGTTTACTGATCGGAACAGTGAGAGTCCTGATGACTACTTTGCA
GGAAGTATATACAATTCCACAAGTAATACTGGGGGCAGTAGTGGTTACCTAATCGATCCA
AGGGGGGTTAACATTTCCACTGACTGCAATTCTTCTTACTTCGAAGGCCTTTCATTTCAT
AATACTTCTTCAGTATGCTCATCAAATAGTGGGAGTAATGTTGTCGATGGATTCTTAGAC
TCTCCTGTTAGTTCTTTTCATATTCCTGATATATATGATGAGAGTCAATCTATTTTGAAC
TTTCAGAAAGGAGTTGAAGAAGCAAGTAAGTTCCTCCCGACTAGTAATAAGTTGTTGAAC
AGTGTAGATATAAATGACTTGCCATCTCGGGAGCCCCAAAGGCAAGCTGGTTATGCAGCT
GCTCAGGTGGAGGAAAAGGATGAGGGAGAGACTTCACCAACTGAGGTGAGAGGGAAGAAA
AATCCTCTGAGGGGTGATAATAATATCGAAGGAGAAAGGAGTAGTAAACAGGCTGCGGTT
TTTACTGAATCAACTCTACGATCGGAGGAGTTTGATATCGTCTTGCTGAATAGCATGGGG
AAGGGAGGAGAAGCACTAGAAGCTTATCGACAAAACCTGAGGAATGCTAAAAGCAAAACC
ACAGTGCAGATATCAAAAGGATCAAAAGGAGGAAAGGGCCGAGGGAAGAAACAGGGCGGA
AAGAAGGAAGTCATAGATTTGAGAACTCTCATGATAAATTGCGCACAGGCTGTTGCTGCT
GACGATTCCAGGATTGCATATGAACTTTTGAAACAAATAAGACAACATTCATCCCCATTT
GGAGATGGAAACCAGAGATTGGCTCATTGCTTTGCAGATGGTCTCGAGGCGCGTTTGGCT
GGTACTGGTAGCCAGATATATAAAGCTCTTGTCAATAAACGAACATCTGCAGCTGATCTT
TTGAAGGCCTACCATTTGTATCTCGCATCTAGCCCATTCAGAAAGATCTCAAGTTTTGCT
TCAAACAAGACAATCATGATAAAGGCAGAGAATGCAACAAGGGTTCATGTTATTGACTTT
GGCATCCTGTATGGTTTCCAATGGCCTACATTCATCCAACGTATTGCAGAAAGAGAAGGG
GGGCCACCAAGGCTTCGTATTACTGGCATAGAGTTTCCCCAACCAGGCTTCAGGCCAGCG
GAACGGATTGAGGAAACAGGTCGCCGTTTGGCTGATTATGCTCGATCCTTTAATGTTCCA
TTTGAATACCATGCAATTGCAAAGAAATGGGAGAGCATTACAGTTGAGGATCTAAAACTC
GACAAAGATGAATTTCTTGCTGTCAACTGCTTGTATCGTTTTAAGAACCTGCATGATGAG
ACTATTGCAGTTGAAAGTTCAAGAACTATCGTTCTCAACCTCGTAAGGAAGATCAATCCA
GATATTTTCGTCCATGGTATTGTCAATGGGGCCTATAGTGCCCCATTTTTTGTCACACGG
TTTCGTGAGGCCTTATTCCACTTTTCTGCACTTTTTGATATGCTTGAAACTATTGTTCCC
CGTGAGATTCCAGAAAGACGATTAATTGAGAGAGAGATATTTGGGAGGGAAGCACTGAAT
GTCATAGCTTGTGAGGGGTGGGAAAGAGTTGAACGACCAGAGACATACAAGCAGTGGCAA
GCTCGTATTATGGGGGCAAGGTTTACGCAGATACCTTTTGACCGGGAGGAATTCGTGAAT
AAGGCAATAGAGAAAGTGAGGTTAGGATATCATAGAGACTTTGTAATCGATGAAGATAGC
CAGTGGTTGTTGCTGGGGTGGAAAGGAAGAACAATTTACGCCTTATCTTGTTGGAAACCT
GTGTAA