Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022972
CDS Infomation

pacid=37458577 polypeptide=PGSC0003DMP400015647 locus=PGSC0003DMG400008894 ID=PGSC0003DMT400022972.v4.03 annot-version=v4.03
Sequence

ATGAGTGAAAATGGTGGAAGAGAAGAGGAAGAGGAGTTGAAAATGGAGGAACAGAAGAAG
AAGTATGAGGTGTTAATGTGGGGATATCTTCCCGGAGTATTGTCTCATAAGTCGCCGTTA
ACTTCTCCGGTGGAAGTTCAGTTGCCGGATAACGGAATCGATGTTCAATCATGGAAGGAT
GTATGTGGAGGAGGTTGTGGTTTCGCTATGGCTATTTCAGCAGGGTCTGGAAAACTAATC
ACGTGGGGTTCTGCAGATGATCAAGGCCAAAGCTACTTGACTTCTGGAAAACATGGGGAG
ACTCCAGAACCGTTTCCGCTTCCAACTGAAGATCCAATCGTGAAAGCCGCAGCTGGTTGG
GCACATTGTGTATCTGTTACTGAAAAGAATGATGTGTACACATGGGGCTGGAAAGAATGT
GTGCCTTCTTCCAAGGTTGTTGCAAATTTTGTTTCTGGAGGGAGTTTTGAAGGGGATGCT
ATTCGGAAAGAATCAGTGCCAACTGACCAAGAAAGCCCTCAATCTCAAGGCTCCAAGCCA
ATTGGTGGTTCAGTTGCTCACCAAGATAATAAAAAACCTGAAGAAACTGCAAAGAGGAGA
AGAACAATGACGGCTAAACAAGAACTTGAAAGCCCACCCCTTGCTGACGAATCTCTTTCT
GCACCAGCTTGTATTGTAGAACTGGATCCAGGGGTGAAGATAACCTCCGTTGCTGCTGGA
GGGCGCCACACTTTAGCATTGTCAGATGTGGGACAGGTATGGGGTTGGGGCTATGGAGGT
GAAGGACAGCTTGGTTTAGGCTCCAGGATTAAAATTGTGGCTTCTCCTCATCTTATACCT
TGTCTGGATGCTTCTTCACATGGACCTGACCGGAGCCTTGGGAGTCCTCAAGGAAGCATT
ACCACTGGGAGTCAGAAACGTAAAGCCTTGGGGAGCTACATAAAGAGTATTTCTTGTGGT
GGTCGGCATAGTGCAGTAATCACAGATACTGGGGTGCTGCTTACATTTGGCTGGGGATTG
TATGGACAGTGTGGACTAGGTAATACAAATGACGTGCTGAGGCCAACTTGTGTGTCTTCT
CTATTGAACACTAGAATAGAAGCCGTGGCAGGTGGACTGTGGCACTCTGTGTGCTTATGT
GATCATGGGCGTGTGTATACTTTTGGGGGAAATCAGTTTGGCCAATTGGGTCTAGGCACA
GGCACCGACCACACAGAGACATCACCTAGACTTGTGGATGCCCCAATACTGGAGAACAAG
AATGCCAAGGTAGTGTCTTGTGGAGCTCGCCATAGCGCAATAATGACAGATGACAGCAAA
ATTTATAGCTGGGGATGGAACAAGTATGGTCAGCTTGGCTTAGGTGATACAATTGACCGT
AATGATCCTTGTGAAGTGCCCACCGACGATTGTATGCCGAAGAATGTAGCGTGTGGGTGG
TGGCACACACTATTACTTGCTGAAAGCCGTCCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015647
PEP Infomation

pacid=37458577 transcript=PGSC0003DMT400022972 locus=PGSC0003DMG400008894 ID=PGSC0003DMT400022972.v4.03 annot-version=v4.03
Sequence

MSENGGREEEEELKMEEQKKKYEVLMWGYLPGVLSHKSPLTSPVEVQLPDNGIDVQSWKD
VCGGGCGFAMAISAGSGKLITWGSADDQGQSYLTSGKHGETPEPFPLPTEDPIVKAAAGW
AHCVSVTEKNDVYTWGWKECVPSSKVVANFVSGGSFEGDAIRKESVPTDQESPQSQGSKP
IGGSVAHQDNKKPEETAKRRRTMTAKQELESPPLADESLSAPACIVELDPGVKITSVAAG
GRHTLALSDVGQVWGWGYGGEGQLGLGSRIKIVASPHLIPCLDASSHGPDRSLGSPQGSI
TTGSQKRKALGSYIKSISCGGRHSAVITDTGVLLTFGWGLYGQCGLGNTNDVLRPTCVSS
LLNTRIEAVAGGLWHSVCLCDHGRVYTFGGNQFGQLGLGTGTDHTETSPRLVDAPILENK
NAKVVSCGARHSAIMTDDSKIYSWGWNKYGQLGLGDTIDRNDPCEVPTDDCMPKNVACGW
WHTLLLAESRP*

Transcript Sequence

Transcript ID

PGSC0003DMT400022972
Transcript Infomation

pacid=37458577 locus=PGSC0003DMG400008894 ID=PGSC0003DMT400022972.v4.03 annot-version=v4.03
Sequence

ATGAGTGAAAATGGTGGAAGAGAAGAGGAAGAGGAGTTGAAAATGGAGGAACAGAAGAAG
AAGTATGAGGTGTTAATGTGGGGATATCTTCCCGGAGTATTGTCTCATAAGTCGCCGTTA
ACTTCTCCGGTGGAAGTTCAGTTGCCGGATAACGGAATCGATGTTCAATCATGGAAGGAT
GTATGTGGAGGAGGTTGTGGTTTCGCTATGGCTATTTCAGCAGGGTCTGGAAAACTAATC
ACGTGGGGTTCTGCAGATGATCAAGGCCAAAGCTACTTGACTTCTGGAAAACATGGGGAG
ACTCCAGAACCGTTTCCGCTTCCAACTGAAGATCCAATCGTGAAAGCCGCAGCTGGTTGG
GCACATTGTGTATCTGTTACTGAAAAGAATGATGTGTACACATGGGGCTGGAAAGAATGT
GTGCCTTCTTCCAAGGTTGTTGCAAATTTTGTTTCTGGAGGGAGTTTTGAAGGGGATGCT
ATTCGGAAAGAATCAGTGCCAACTGACCAAGAAAGCCCTCAATCTCAAGGCTCCAAGCCA
ATTGGTGGTTCAGTTGCTCACCAAGATAATAAAAAACCTGAAGAAACTGCAAAGAGGAGA
AGAACAATGACGGCTAAACAAGAACTTGAAAGCCCACCCCTTGCTGACGAATCTCTTTCT
GCACCAGCTTGTATTGTAGAACTGGATCCAGGGGTGAAGATAACCTCCGTTGCTGCTGGA
GGGCGCCACACTTTAGCATTGTCAGATGTGGGACAGGTATGGGGTTGGGGCTATGGAGGT
GAAGGACAGCTTGGTTTAGGCTCCAGGATTAAAATTGTGGCTTCTCCTCATCTTATACCT
TGTCTGGATGCTTCTTCACATGGACCTGACCGGAGCCTTGGGAGTCCTCAAGGAAGCATT
ACCACTGGGAGTCAGAAACGTAAAGCCTTGGGGAGCTACATAAAGAGTATTTCTTGTGGT
GGTCGGCATAGTGCAGTAATCACAGATACTGGGGTGCTGCTTACATTTGGCTGGGGATTG
TATGGACAGTGTGGACTAGGTAATACAAATGACGTGCTGAGGCCAACTTGTGTGTCTTCT
CTATTGAACACTAGAATAGAAGCCGTGGCAGGTGGACTGTGGCACTCTGTGTGCTTATGT
GATCATGGGCGTGTGTATACTTTTGGGGGAAATCAGTTTGGCCAATTGGGTCTAGGCACA
GGCACCGACCACACAGAGACATCACCTAGACTTGTGGATGCCCCAATACTGGAGAACAAG
AATGCCAAGGTAGTGTCTTGTGGAGCTCGCCATAGCGCAATAATGACAGATGACAGCAAA
ATTTATAGCTGGGGATGGAACAAGTATGGTCAGCTTGGCTTAGGTGATACAATTGACCGT
AATGATCCTTGTGAAGTGCCCACCGACGATTGTATGCCGAAGAATGTAGCGTGTGGGTGG
TGGCACACACTATTACTTGCTGAAAGCCGTCCATGA