Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022959
CDS Infomation

pacid=37457901 polypeptide=PGSC0003DMP400015638 locus=PGSC0003DMG401008890 ID=PGSC0003DMT400022959.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGGCGACGGAGATGCCGTACTTTAAGTTGAACACCGGTTTCAGCATTCCGGCG
GTCGGTTTGGGAACGTGGCAGTCCGATCCCGGCGTCGTCGGCAAAGCCGTGGAGACTGCT
ATCAAGATGGGCTACCGGCATATTGATTGTGCTCAAGTTTATAAAAATGAGAAGGAGATT
GGTGAAGTTTTGAGCAGGCTGTTTAAAGATGGTGTTGTCAAGAGGCGAGATCTATTTATT
ACATCCAAACTCTCGAACACTAATCATGCACCTGAAGATGTACCAGTCGCACTAGACAAA
ACTCTTAAAGACTTGCAGCTGGAATACGTTGACCTGTACCTCATCCATTGGCCTGTCAGT
ATGAAGCCTGGATCAGTTGACTTTAAACCTGAAAATCTTATGCCAACCAACATACCCAGC
ATATGGGAAGCAATGGAAAAAGTTTATGATTCCGGGAAGGCTAGAGTTATTGGTGTTAGC
AATTTCTCTACTAAGAAACTGGGAGATCTTTTACAAGTAGCACGTATTCGTCCTGCTGTC
AACCAGGTGGAGTGCCATCCTTCGTGGCAACAAGCCAAATTGCGCGAGTTCTGTAAATCC
AATGAAGTGCACCTCTCTGCATATTCGCCGCTTGGGTCTCCAGGTACAACATGGCTTAAA
AGTGATGTGCTAAAGCAGCCAGCTGTAATCTCAGTTGCTGAGAAATTGGGCAAGACTCCT
GCACAGGTTTGTCTTCGTTGGGGCATTCAGATGGGTCAGAGTGTACTTCCTAAGAGCACA
CATGAAGCACGGATTAAAGAGAATCTTGATGTACTGAACTGGTCTATACCTGATGACTTG
CTTGCCAGGTTCTCTGAAATTCCACAGGCAAGGCTGCTGAGAGGCATTTCATTTGTTCAC
GAGACGCATGGCCAGTACAGAACACTTGAAGAGCTGTGGGATGATGAGATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015638
PEP Infomation

pacid=37457901 transcript=PGSC0003DMT400022959 locus=PGSC0003DMG401008890 ID=PGSC0003DMT400022959.v4.03 annot-version=v4.03
Sequence

MAEATEMPYFKLNTGFSIPAVGLGTWQSDPGVVGKAVETAIKMGYRHIDCAQVYKNEKEI
GEVLSRLFKDGVVKRRDLFITSKLSNTNHAPEDVPVALDKTLKDLQLEYVDLYLIHWPVS
MKPGSVDFKPENLMPTNIPSIWEAMEKVYDSGKARVIGVSNFSTKKLGDLLQVARIRPAV
NQVECHPSWQQAKLREFCKSNEVHLSAYSPLGSPGTTWLKSDVLKQPAVISVAEKLGKTP
AQVCLRWGIQMGQSVLPKSTHEARIKENLDVLNWSIPDDLLARFSEIPQARLLRGISFVH
ETHGQYRTLEELWDDEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400022959
Transcript Infomation

pacid=37457901 locus=PGSC0003DMG401008890 ID=PGSC0003DMT400022959.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGGCGACGGAGATGCCGTACTTTAAGTTGAACACCGGTTTCAGCATTCCGGCG
GTCGGTTTGGGAACGTGGCAGTCCGATCCCGGCGTCGTCGGCAAAGCCGTGGAGACTGCT
ATCAAGATGGGCTACCGGCATATTGATTGTGCTCAAGTTTATAAAAATGAGAAGGAGATT
GGTGAAGTTTTGAGCAGGCTGTTTAAAGATGGTGTTGTCAAGAGGCGAGATCTATTTATT
ACATCCAAACTCTCGAACACTAATCATGCACCTGAAGATGTACCAGTCGCACTAGACAAA
ACTCTTAAAGACTTGCAGCTGGAATACGTTGACCTGTACCTCATCCATTGGCCTGTCAGT
ATGAAGCCTGGATCAGTTGACTTTAAACCTGAAAATCTTATGCCAACCAACATACCCAGC
ATATGGGAAGCAATGGAAAAAGTTTATGATTCCGGGAAGGCTAGAGTTATTGGTGTTAGC
AATTTCTCTACTAAGAAACTGGGAGATCTTTTACAAGTAGCACGTATTCGTCCTGCTGTC
AACCAGGTGGAGTGCCATCCTTCGTGGCAACAAGCCAAATTGCGCGAGTTCTGTAAATCC
AATGAAGTGCACCTCTCTGCATATTCGCCGCTTGGGTCTCCAGGTACAACATGGCTTAAA
AGTGATGTGCTAAAGCAGCCAGCTGTAATCTCAGTTGCTGAGAAATTGGGCAAGACTCCT
GCACAGGTTTGTCTTCGTTGGGGCATTCAGATGGGTCAGAGTGTACTTCCTAAGAGCACA
CATGAAGCACGGATTAAAGAGAATCTTGATGTACTGAACTGGTCTATACCTGATGACTTG
CTTGCCAGGTTCTCTGAAATTCCACAGGCAAGGCTGCTGAGAGGCATTTCATTTGTTCAC
GAGACGCATGGCCAGTACAGAACACTTGAAGAGCTGTGGGATGATGAGATCTAA