Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022952
CDS Infomation

pacid=37458231 polypeptide=PGSC0003DMP400015631 locus=PGSC0003DMG402008890 ID=PGSC0003DMT400022952.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGGCGACGGAGATGCCGTACTTTAAGTTGAATACCGGTTTCAGCATTCCGGCG
GTCGGTTTGGGAACATGGCAGTCCGATCCCGGTGTCGTCGGCAAAGCTGTGGAGACTGCT
ATCAAGATGGGTTACCGGCATATTGATTGTGCTCAAATTTATAAAAATGAGAAGGAGATT
GGTGAAGTTTTGAGCAGGCTGTTTAAAGATGGTGTTGTCAAGAGGCAAGATCTATTCATT
ACATCCAAACTCTGGAACACTAATCATGCACCTGAAGATGTACCAGTCACACTAGACAAA
ACTCTTAAAGACTTGCAGCTGGAATACGTTGACCTGTACCTCATCCATTGGCCTGTCAGT
ATGAAGCCTGGATCAGTTGACTTTAAACCTGAAAATCTTATGCCAACCAACATACCCAGC
ATATGGGAAGCAATGGAAAAAGTTTATGATTCCGGGAAGGCTAGAGTTATTGGTGTTAGC
AATTTCTCTACTAAGAAACTGGGAGATCTTTTACAAGTAGCACGTATTCGTCCTGCTGTC
AACCAGGTGGAGTGCCATCCTTCGTGGCAACAAACCAAATTGCGGGAGTTCTGTGAATCC
AATGAAGTGCACCTCTCTGCATATTCGCCGCTTGGGTCTCCAGGTACAACATGGCTTAAA
AGTGATGTGCTAAAGCAGCCAGCTGTAATCTCAGTTGCTGAGAAATTGGGCAAGACTCCT
GCACAGGTTTGTCTTCGTTGGGGCATTCAGATGGGTCAGAGTGTACTTCCTAAGAGCACA
CATGAAGCACGGATTAAAGAGAATCTTGATGTACTGAACTGGTCTATACCTGATGACTTA
CTTGCCAAGTTCTCTGAAATTCCACAGGCAAGGCTGCTGAGAGGCACTTCATTTGCTAAT
GAGACGCATGGGCAGTACAGAACACTTGAAGAGCTGTGGGATGATGAGATCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015631
PEP Infomation

pacid=37458231 transcript=PGSC0003DMT400022952 locus=PGSC0003DMG402008890 ID=PGSC0003DMT400022952.v4.03 annot-version=v4.03
Sequence

MAEATEMPYFKLNTGFSIPAVGLGTWQSDPGVVGKAVETAIKMGYRHIDCAQIYKNEKEI
GEVLSRLFKDGVVKRQDLFITSKLWNTNHAPEDVPVTLDKTLKDLQLEYVDLYLIHWPVS
MKPGSVDFKPENLMPTNIPSIWEAMEKVYDSGKARVIGVSNFSTKKLGDLLQVARIRPAV
NQVECHPSWQQTKLREFCESNEVHLSAYSPLGSPGTTWLKSDVLKQPAVISVAEKLGKTP
AQVCLRWGIQMGQSVLPKSTHEARIKENLDVLNWSIPDDLLAKFSEIPQARLLRGTSFAN
ETHGQYRTLEELWDDEI*

Transcript Sequence

Transcript ID

PGSC0003DMT400022952
Transcript Infomation

pacid=37458231 locus=PGSC0003DMG402008890 ID=PGSC0003DMT400022952.v4.03 annot-version=v4.03
Sequence

ATGGCGGAGGCGACGGAGATGCCGTACTTTAAGTTGAATACCGGTTTCAGCATTCCGGCG
GTCGGTTTGGGAACATGGCAGTCCGATCCCGGTGTCGTCGGCAAAGCTGTGGAGACTGCT
ATCAAGATGGGTTACCGGCATATTGATTGTGCTCAAATTTATAAAAATGAGAAGGAGATT
GGTGAAGTTTTGAGCAGGCTGTTTAAAGATGGTGTTGTCAAGAGGCAAGATCTATTCATT
ACATCCAAACTCTGGAACACTAATCATGCACCTGAAGATGTACCAGTCACACTAGACAAA
ACTCTTAAAGACTTGCAGCTGGAATACGTTGACCTGTACCTCATCCATTGGCCTGTCAGT
ATGAAGCCTGGATCAGTTGACTTTAAACCTGAAAATCTTATGCCAACCAACATACCCAGC
ATATGGGAAGCAATGGAAAAAGTTTATGATTCCGGGAAGGCTAGAGTTATTGGTGTTAGC
AATTTCTCTACTAAGAAACTGGGAGATCTTTTACAAGTAGCACGTATTCGTCCTGCTGTC
AACCAGGTGGAGTGCCATCCTTCGTGGCAACAAACCAAATTGCGGGAGTTCTGTGAATCC
AATGAAGTGCACCTCTCTGCATATTCGCCGCTTGGGTCTCCAGGTACAACATGGCTTAAA
AGTGATGTGCTAAAGCAGCCAGCTGTAATCTCAGTTGCTGAGAAATTGGGCAAGACTCCT
GCACAGGTTTGTCTTCGTTGGGGCATTCAGATGGGTCAGAGTGTACTTCCTAAGAGCACA
CATGAAGCACGGATTAAAGAGAATCTTGATGTACTGAACTGGTCTATACCTGATGACTTA
CTTGCCAAGTTCTCTGAAATTCCACAGGCAAGGCTGCTGAGAGGCACTTCATTTGCTAAT
GAGACGCATGGGCAGTACAGAACACTTGAAGAGCTGTGGGATGATGAGATCTAA