Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022937
CDS Infomation

pacid=37456568 polypeptide=PGSC0003DMP400015620 locus=PGSC0003DMG400008887 ID=PGSC0003DMT400022937.v4.03 annot-version=v4.03
Sequence

ATGGCTCAATCGATGAGCAGAGGAGGGAGGTCTGTAGTTGGGGACTATGTTGTAGGGAAG
CAAATCGGTGCCGGCTCTTTCTCGACGGTGTGGCATGCTCGGCACCGAGCTCATGGAACC
GAAGTTGCTATAAAGGAGATCGTTACGGCTCGGCTTAACAACAAGCTTCAGGAGAGTCTA
AAGTCAGAAATTGTAATTTTGCAGAAGATTAATCATCCTAATATTATTCGCCTGCACGAC
ATGATCGAGGAGGTGGGAAAAATATATATTGTTTTGGAGTACTGCAGAGGAGGAGATCTT
TCTATGTACATTCAACAAAGCCAAGGGAGAATTCCAGAAGCAACTGCGAAACATTTTATG
CAGCAACTTGCATCTGGTCTAAAAATCCTTCGCGACAACAATCTAATCCATAGGGATCTA
AAGCCTCAGAATCTCCTCTTATCCTCAAACGATGACCGCTCCACCTTGAAGATTGCTGAT
TTTGGATTTGCAAGGTCTTTGCAACCTAGGGGTCTTGCTGAAACACTTTGTGGTTCACCA
TTGTACATGGCTCCAGAAATAATGCAACTTCAGAAGTATGATGCAAAGGCAGATCTCTGG
AGCGTCGGTGCCATCCTGTTTCAGCTAGTAACTGGCAAAACCCCTTTTACCGGAAACAAT
CAAATCCAGTTGCTCCAGAACATATTGAAGTCGACTGAATTGCTGTTTCCTCCAAGTGCA
AAAAATTTAAGTCCTAGCTGCATAGATTTGTGTAAAAAATTGTTGCGCCGTTATCCAGTG
GAGCGGTTGACATTTGAAGAGTTCTTTAACCACCCATTTCTTGCACAGAAGCAGCCAGAT
GAGCTGTCTTGGGATACGAGACCTCAAAGGGTAATAGGTGGTTTTCCTATATCAGAAGGC
TATCCTGCGAGGGGCACAGAGGAAACTTTTCAAGAAGATGGTTTACCCTTTAGTCTAGAT
GATGATTCCAGCGGTCCTAATGGTGGTCCTTCATTTACTGGGAGATTACCACAGAGGTTG
TCATATGGTTTTTCTTGTGATGCAAAAGCTGAAAGGAAAGAAGTTACTAGTAGTACCCCA
CAGAAAACAGATAGTATTGGTTCTAGCCACCGACATTCAGAAAGGAACCTGAAGGGATCT
ATTAATTTGAAGGACCATAGACAAACAACTACTCGTTCAAAAGTGGTGGATTCATTCGAG
TTGATTGATCAGGACTATGTTATTGTTTCTGGCCCTCCAGTGGATTCATATTCTTCAATA
GGTGCTTCTAGGCTTAGCAATATGCCTTTCAGATCAAGCTGTTCCCTGCAAGCGTCTGCG
AGAGTAGATCCTAGACCAAGTGACCCGGTTCCTATTAGTGGTCCTCCTCTTAGTAGAATA
GGTCATTTAGGAAGTTCGGAAAGTCCCTCATCTGCACCTGGAGCTTCACAAGTATGCACT
GATGTCATAAATTGCTTGGAGCAGTCACCACCTGATGGCATGGCCAGGATAGAGTCCCTG
CAGCGTTCTGCCTCTGCTATCATGGAATTAGTAAATGAGAAGGTTGAAGCAGGCCGGCAT
CTGGAAGCATTTTCAATTCAGCTAGTCATTCTTGCTATATGGAAGCAAGCTCTGGATATT
TGTCATACACAAGCGGCATCGGCAATTGAAGGAAGTCCAAGCCAAGAGACGATCAGATTA
AAGGAAATGATGAAGAAAGGTCAAGTTAGTCTTAGCATAAAAGAGCATCTTGATGCTAGT
AACATTTTGGGGCCGGAGAATGTGTGTTCTCATATTGAAAAAGCATTTCTTGGTGAAGTT
GGTAACGCAGAGGAACTTGCCAAACATATAGAGCCTGGAAATACAGAGGTTCCAGATGCA
ATGGAGATGATATTTCAATCTGCCCTGGCTTTGGGTAGAAAGGGAGCTGTTGATGAGTAC
ATGAGTCGGACTGAAAATGCAGTCATGTTTTATTCAAAAGCTGTGCGGTTGTTAGCATTC
CTTCAAGTGGAAGCACCATCTCTGATTTTAAACCCTCCATTTTCTCTAACAAACTCAGAT
CGTTATAGGCTTCAAAATTACATTGATGTCCTTAATAACAGGCAAAGCGTTTCAAAGTCT
CAAATGATGGCTCTACTCAAGTGTGAAGATCAACACTGCTCTCCGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400015620
PEP Infomation

pacid=37456568 transcript=PGSC0003DMT400022937 locus=PGSC0003DMG400008887 ID=PGSC0003DMT400022937.v4.03 annot-version=v4.03
Sequence

MAQSMSRGGRSVVGDYVVGKQIGAGSFSTVWHARHRAHGTEVAIKEIVTARLNNKLQESL
KSEIVILQKINHPNIIRLHDMIEEVGKIYIVLEYCRGGDLSMYIQQSQGRIPEATAKHFM
QQLASGLKILRDNNLIHRDLKPQNLLLSSNDDRSTLKIADFGFARSLQPRGLAETLCGSP
LYMAPEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNILKSTELLFPPSA
KNLSPSCIDLCKKLLRRYPVERLTFEEFFNHPFLAQKQPDELSWDTRPQRVIGGFPISEG
YPARGTEETFQEDGLPFSLDDDSSGPNGGPSFTGRLPQRLSYGFSCDAKAERKEVTSSTP
QKTDSIGSSHRHSERNLKGSINLKDHRQTTTRSKVVDSFELIDQDYVIVSGPPVDSYSSI
GASRLSNMPFRSSCSLQASARVDPRPSDPVPISGPPLSRIGHLGSSESPSSAPGASQVCT
DVINCLEQSPPDGMARIESLQRSASAIMELVNEKVEAGRHLEAFSIQLVILAIWKQALDI
CHTQAASAIEGSPSQETIRLKEMMKKGQVSLSIKEHLDASNILGPENVCSHIEKAFLGEV
GNAEELAKHIEPGNTEVPDAMEMIFQSALALGRKGAVDEYMSRTENAVMFYSKAVRLLAF
LQVEAPSLILNPPFSLTNSDRYRLQNYIDVLNNRQSVSKSQMMALLKCEDQHCSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400022937
Transcript Infomation

pacid=37456568 locus=PGSC0003DMG400008887 ID=PGSC0003DMT400022937.v4.03 annot-version=v4.03
Sequence

ATGGCTCAATCGATGAGCAGAGGAGGGAGGTCTGTAGTTGGGGACTATGTTGTAGGGAAG
CAAATCGGTGCCGGCTCTTTCTCGACGGTGTGGCATGCTCGGCACCGAGCTCATGGAACC
GAAGTTGCTATAAAGGAGATCGTTACGGCTCGGCTTAACAACAAGCTTCAGGAGAGTCTA
AAGTCAGAAATTGTAATTTTGCAGAAGATTAATCATCCTAATATTATTCGCCTGCACGAC
ATGATCGAGGAGGTGGGAAAAATATATATTGTTTTGGAGTACTGCAGAGGAGGAGATCTT
TCTATGTACATTCAACAAAGCCAAGGGAGAATTCCAGAAGCAACTGCGAAACATTTTATG
CAGCAACTTGCATCTGGTCTAAAAATCCTTCGCGACAACAATCTAATCCATAGGGATCTA
AAGCCTCAGAATCTCCTCTTATCCTCAAACGATGACCGCTCCACCTTGAAGATTGCTGAT
TTTGGATTTGCAAGGTCTTTGCAACCTAGGGGTCTTGCTGAAACACTTTGTGGTTCACCA
TTGTACATGGCTCCAGAAATAATGCAACTTCAGAAGTATGATGCAAAGGCAGATCTCTGG
AGCGTCGGTGCCATCCTGTTTCAGCTAGTAACTGGCAAAACCCCTTTTACCGGAAACAAT
CAAATCCAGTTGCTCCAGAACATATTGAAGTCGACTGAATTGCTGTTTCCTCCAAGTGCA
AAAAATTTAAGTCCTAGCTGCATAGATTTGTGTAAAAAATTGTTGCGCCGTTATCCAGTG
GAGCGGTTGACATTTGAAGAGTTCTTTAACCACCCATTTCTTGCACAGAAGCAGCCAGAT
GAGCTGTCTTGGGATACGAGACCTCAAAGGGTAATAGGTGGTTTTCCTATATCAGAAGGC
TATCCTGCGAGGGGCACAGAGGAAACTTTTCAAGAAGATGGTTTACCCTTTAGTCTAGAT
GATGATTCCAGCGGTCCTAATGGTGGTCCTTCATTTACTGGGAGATTACCACAGAGGTTG
TCATATGGTTTTTCTTGTGATGCAAAAGCTGAAAGGAAAGAAGTTACTAGTAGTACCCCA
CAGAAAACAGATAGTATTGGTTCTAGCCACCGACATTCAGAAAGGAACCTGAAGGGATCT
ATTAATTTGAAGGACCATAGACAAACAACTACTCGTTCAAAAGTGGTGGATTCATTCGAG
TTGATTGATCAGGACTATGTTATTGTTTCTGGCCCTCCAGTGGATTCATATTCTTCAATA
GGTGCTTCTAGGCTTAGCAATATGCCTTTCAGATCAAGCTGTTCCCTGCAAGCGTCTGCG
AGAGTAGATCCTAGACCAAGTGACCCGGTTCCTATTAGTGGTCCTCCTCTTAGTAGAATA
GGTCATTTAGGAAGTTCGGAAAGTCCCTCATCTGCACCTGGAGCTTCACAAGTATGCACT
GATGTCATAAATTGCTTGGAGCAGTCACCACCTGATGGCATGGCCAGGATAGAGTCCCTG
CAGCGTTCTGCCTCTGCTATCATGGAATTAGTAAATGAGAAGGTTGAAGCAGGCCGGCAT
CTGGAAGCATTTTCAATTCAGCTAGTCATTCTTGCTATATGGAAGCAAGCTCTGGATATT
TGTCATACACAAGCGGCATCGGCAATTGAAGGAAGTCCAAGCCAAGAGACGATCAGATTA
AAGGAAATGATGAAGAAAGGTCAAGTTAGTCTTAGCATAAAAGAGCATCTTGATGCTAGT
AACATTTTGGGGCCGGAGAATGTGTGTTCTCATATTGAAAAAGCATTTCTTGGTGAAGTT
GGTAACGCAGAGGAACTTGCCAAACATATAGAGCCTGGAAATACAGAGGTTCCAGATGCA
ATGGAGATGATATTTCAATCTGCCCTGGCTTTGGGTAGAAAGGGAGCTGTTGATGAGTAC
ATGAGTCGGACTGAAAATGCAGTCATGTTTTATTCAAAAGCTGTGCGGTTGTTAGCATTC
CTTCAAGTGGAAGCACCATCTCTGATTTTAAACCCTCCATTTTCTCTAACAAACTCAGAT
CGTTATAGGCTTCAAAATTACATTGATGTCCTTAATAACAGGCAAAGCGTTTCAAAGTCT
CAAATGATGGCTCTACTCAAGTGTGAAGATCAACACTGCTCTCCGTAA