Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022903
CDS Infomation

pacid=37455421 polypeptide=PGSC0003DMP400015600 locus=PGSC0003DMG400008877 ID=PGSC0003DMT400022903.v4.03 annot-version=v4.03
Sequence

ATGCCGAGAACAAGGGCCAGTGCTGCAGCTATTAAATCTGAACCTGAGAAACCTGTTGAG
ACTGAAGAGCATGTTGACTTTGAAGGTGATAATGAAGAAGAGGAAGAGATTGAGTATGAA
GAGGTAGAAGAAGAGGTGGAAATGGAAGAGGAAGAAGAAGAGGAGGTCGAAGAGGAGGTG
GAAGAAGAAGAAGAGGAGGAGGAGGAGGAAAATGGAAGTGATGGAGCTGGTGAAGGAAAG
GGGTCAGAGGATGTAAAAATGAAAGTTGATGCAGATGCTGAGGATATGGAGAAAAAGCAT
GCTGAGCTCCTCGCCCTTCCTCCCCATGGTTCAGAAGTGTACATAGGTGGTGTTACTCAT
GATGTTTCTGAGGCAGATGTGAGGGAATTTTGTGAGACAATTGGGGAAGTTACAGAGGTA
AGAATAATGAAAGGGAAGGACTCAACTCAGAACAAAGGATATGCATTTGTTACCTATAGA
AACAAGGAATTGGCATCCAAGGCTATTAAAGAGCTCAACAACACTGAGCTGAAGGGAAAA
AGGGTCAAATGTTCTCCAGCTCAAGCTAAACATAAGTTATTCATTGGTAATGTTCCTAGA
ACCTGGGGAGAGGAAGATATGAGGACAGCTGTAACAAATGTAGGGCCTGGGGTTATTACT
ATTGAGTTAGTGAAGGATCCTCTGAATTCGGGTAAAAATCGTGGATTCGCTTTTATAGAA
TATTACAATCATGCATGTGCAGAGTATTCAAGACAAGAGATGTCAAATTCAGATTTTAAG
CTTGATGATAATGCACCAACTGTTAGCTGGGCAGATCCCAAAAATGCCGAAACTGCTTCT
TCACAGGTTAAGGCAGTGTATGTGAAGAACTTGCCCAAACACATTAACCAAGACAAGCTA
AGAGAGTTGTTTGAACATCATGGGAAAATTACGAAAGTAGTTCTTCCTCCAGCTAAACCA
GGGCAAGAACAGAGCAGATATGGCTTTGTTCACTTTGCTGATAGGTCAAGTGCTATGAGG
GCCCTGAAGAACACTGAGAAATATGAAATAGATGGGAAAATTCTGGAGTGTTCACTTGCA
AAGCCTCAGGTAGATCAAAAATCTTCAGGAGGATCAAGTTCACAAAAGGGAGTCACACTT
CCAACTTACCCTCCTCGTATTGGATATGGCATGATGGGAACCCCTTATGGTGCGCTAGGT
GCAGGCTTTGGTGCAGGATATGGTGGTCCAGGTGTAGCCCAACCAATGGTTTATGGAAGA
GGAGCTACACCTGGTGGCTTGGCAATGATGCCGATGCTTTTACCTGATGGAAGGATTGGA
TATGTCCTGCAACAACCAGGAGTTATGCATTCTCCTCCTCCAACATCACGAGGTGGACGT
AGTGGTGGAGGCAGTTCAAGTGACGGAAGGCGGGGTGACAGTGGTGGACGAGGGCGTCCC
CGTTACAACCCATACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400015600
PEP Infomation

pacid=37455421 transcript=PGSC0003DMT400022903 locus=PGSC0003DMG400008877 ID=PGSC0003DMT400022903.v4.03 annot-version=v4.03
Sequence

MPRTRASAAAIKSEPEKPVETEEHVDFEGDNEEEEEIEYEEVEEEVEMEEEEEEEVEEEV
EEEEEEEEEENGSDGAGEGKGSEDVKMKVDADAEDMEKKHAELLALPPHGSEVYIGGVTH
DVSEADVREFCETIGEVTEVRIMKGKDSTQNKGYAFVTYRNKELASKAIKELNNTELKGK
RVKCSPAQAKHKLFIGNVPRTWGEEDMRTAVTNVGPGVITIELVKDPLNSGKNRGFAFIE
YYNHACAEYSRQEMSNSDFKLDDNAPTVSWADPKNAETASSQVKAVYVKNLPKHINQDKL
RELFEHHGKITKVVLPPAKPGQEQSRYGFVHFADRSSAMRALKNTEKYEIDGKILECSLA
KPQVDQKSSGGSSSQKGVTLPTYPPRIGYGMMGTPYGALGAGFGAGYGGPGVAQPMVYGR
GATPGGLAMMPMLLPDGRIGYVLQQPGVMHSPPPTSRGGRSGGGSSSDGRRGDSGGRGRP
RYNPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400022903
Transcript Infomation

pacid=37455421 locus=PGSC0003DMG400008877 ID=PGSC0003DMT400022903.v4.03 annot-version=v4.03
Sequence

ATGCCGAGAACAAGGGCCAGTGCTGCAGCTATTAAATCTGAACCTGAGAAACCTGTTGAG
ACTGAAGAGCATGTTGACTTTGAAGGTGATAATGAAGAAGAGGAAGAGATTGAGTATGAA
GAGGTAGAAGAAGAGGTGGAAATGGAAGAGGAAGAAGAAGAGGAGGTCGAAGAGGAGGTG
GAAGAAGAAGAAGAGGAGGAGGAGGAGGAAAATGGAAGTGATGGAGCTGGTGAAGGAAAG
GGGTCAGAGGATGTAAAAATGAAAGTTGATGCAGATGCTGAGGATATGGAGAAAAAGCAT
GCTGAGCTCCTCGCCCTTCCTCCCCATGGTTCAGAAGTGTACATAGGTGGTGTTACTCAT
GATGTTTCTGAGGCAGATGTGAGGGAATTTTGTGAGACAATTGGGGAAGTTACAGAGGTA
AGAATAATGAAAGGGAAGGACTCAACTCAGAACAAAGGATATGCATTTGTTACCTATAGA
AACAAGGAATTGGCATCCAAGGCTATTAAAGAGCTCAACAACACTGAGCTGAAGGGAAAA
AGGGTCAAATGTTCTCCAGCTCAAGCTAAACATAAGTTATTCATTGGTAATGTTCCTAGA
ACCTGGGGAGAGGAAGATATGAGGACAGCTGTAACAAATGTAGGGCCTGGGGTTATTACT
ATTGAGTTAGTGAAGGATCCTCTGAATTCGGGTAAAAATCGTGGATTCGCTTTTATAGAA
TATTACAATCATGCATGTGCAGAGTATTCAAGACAAGAGATGTCAAATTCAGATTTTAAG
CTTGATGATAATGCACCAACTGTTAGCTGGGCAGATCCCAAAAATGCCGAAACTGCTTCT
TCACAGGTTAAGGCAGTGTATGTGAAGAACTTGCCCAAACACATTAACCAAGACAAGCTA
AGAGAGTTGTTTGAACATCATGGGAAAATTACGAAAGTAGTTCTTCCTCCAGCTAAACCA
GGGCAAGAACAGAGCAGATATGGCTTTGTTCACTTTGCTGATAGGTCAAGTGCTATGAGG
GCCCTGAAGAACACTGAGAAATATGAAATAGATGGGAAAATTCTGGAGTGTTCACTTGCA
AAGCCTCAGGTAGATCAAAAATCTTCAGGAGGATCAAGTTCACAAAAGGGAGTCACACTT
CCAACTTACCCTCCTCGTATTGGATATGGCATGATGGGAACCCCTTATGGTGCGCTAGGT
GCAGGCTTTGGTGCAGGATATGGTGGTCCAGGTGTAGCCCAACCAATGGTTTATGGAAGA
GGAGCTACACCTGGTGGCTTGGCAATGATGCCGATGCTTTTACCTGATGGAAGGATTGGA
TATGTCCTGCAACAACCAGGAGTTATGCATTCTCCTCCTCCAACATCACGAGGTGGACGT
AGTGGTGGAGGCAGTTCAAGTGACGGAAGGCGGGGTGACAGTGGTGGACGAGGGCGTCCC
CGTTACAACCCATACTAG