Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400022877
CDS Infomation

pacid=37454590 polypeptide=PGSC0003DMP400015581 locus=PGSC0003DMG401008870 ID=PGSC0003DMT400022877.v4.03 annot-version=v4.03
Sequence

ATGACTGAAATTATACAACCCCAACATGAGTTACCTTCATCTTCAAGCTCCATTAGTATA
CTACCATGTTTAGTAGCTAGAGATAATGATGGGTCTCACCAAGAAAGTCTAATTAGTGGA
CCCAATTTGTATTCTGTTGTAGATGTATACAGAGGGGGAAATAATACTGAGGTACAAGTA
AGAGGAGTTGGTATTTCTGGTAGGAAAAGAGAGAGAAAAAGGAGAGAAAGAGAAGAAGGG
GGAGATCAGCTGTCTTTGTTAACACTTTGTTTAACTGGTTTTAGGAAATCTTTGGTTGCT
TGTAAGAGCAATTTTGATATTATTAGTGGTGTTGGTGTTGAAGAGCTGCTTTCTTCTTCT
TGTTCTGGTTTTAGTTCTAGTTCTAGTTCTAGTTCTGCTAATTCATCAATGGAGATTAGT
TGGCCTAGTAATGTCAGACATGTTGCTCATGTCACTTTTGATAGGTTTAATGGATTTCTT
GGACTTCCTGTTGAGTTTGAACCTGAAGTACCTAGAAGACCTCCCAGTGCCAGTACAAGA
GTCTTTGGAGTTTCGACAGATTGCATGCAGCTTTCATTTGACTCTCGAGGAAATAGCGTC
CCCACAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAGGCTGAA
GGGATCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAAT
AGGGGAATTATTCCAGATAACATTGACGTCCATTGCCTAGCAGGTCTTATAAAGGCTTGG
TTCAGAGAGTTACCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTTCT
CAATCGGAAGAAGAGTGTGTGCAGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTA
TTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAGATG
AATGCACGTAATATTGCTATGGTGTTTGCTCCAAATATGACACAGATGGCAGATCCGTTG
ACTGCTTTGATGTATGCTGTTCAAGTTATGAACTTCCTCAAAACTCTAATTCTCCGGACT
TTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAATTGGAACCATTC
GATGAAAATGGACATCATAGTGCTTCACAGCCAATAGTTCAGAAGTCTAACGAGATCGAG
GAGGATATCCTTATATCCAAAGGACGACCCTCAAGTGGCGCTGCTAATTCTACCCTCAGA
GAGATAATAGTTGAGAATAAATCCCATGGATTACCGTGTACCATAGAGAACGTTCTTCAG
GAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTGCCAGACAGCACAAAGGAT
GAGCTTGGATCTGGTAACATCAATTCAACAAGTGGAAGAAGTCAGCCAAAAATCCGAAGG
ACTAAAAGCGTGCATTCGAGTAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGG
CCAACAGGTCATGTAGCTGGAAATTTAGAGAAAGGCAAGGGGGTCAGAATCATCGATAGG
TTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGA

Peptide Sequence

PEP ID

PGSC0003DMP400015581
PEP Infomation

pacid=37454590 transcript=PGSC0003DMT400022877 locus=PGSC0003DMG401008870 ID=PGSC0003DMT400022877.v4.03 annot-version=v4.03
Sequence

MTEIIQPQHELPSSSSSISILPCLVARDNDGSHQESLISGPNLYSVVDVYRGGNNTEVQV
RGVGISGRKRERKRREREEGGDQLSLLTLCLTGFRKSLVACKSNFDIISGVGVEELLSSS
CSGFSSSSSSSSANSSMEISWPSNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRPPSASTR
VFGVSTDCMQLSFDSRGNSVPTILLMMQGRLYVQGGLQAEGIFRINAENGQEEFVREQLN
RGIIPDNIDVHCLAGLIKAWFRELPTGVLDSLSPEEIMRSQSEEECVQLVRLLPPTEAAL
LDWAINLMADVAQLESFNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRT
LKDREETVVEAGPAPELEPFDENGHHSASQPIVQKSNEIEEDILISKGRPSSGAANSTLR
EIIVENKSHGLPCTIENVLQEDAFVDCLSEISNLPDSTKDELGSGNINSTSGRSQPKIRR
TKSVHSSSSSLKGSKKMIEWPTGHVAGNLEKGKGVRIIDRLNSTTERVEAWR*

Transcript Sequence

Transcript ID

PGSC0003DMT400022877
Transcript Infomation

pacid=37454590 locus=PGSC0003DMG401008870 ID=PGSC0003DMT400022877.v4.03 annot-version=v4.03
Sequence

ATGACTGAAATTATACAACCCCAACATGAGTTACCTTCATCTTCAAGCTCCATTAGTATA
CTACCATGTTTAGTAGCTAGAGATAATGATGGGTCTCACCAAGAAAGTCTAATTAGTGGA
CCCAATTTGTATTCTGTTGTAGATGTATACAGAGGGGGAAATAATACTGAGGTACAAGTA
AGAGGAGTTGGTATTTCTGGTAGGAAAAGAGAGAGAAAAAGGAGAGAAAGAGAAGAAGGG
GGAGATCAGCTGTCTTTGTTAACACTTTGTTTAACTGGTTTTAGGAAATCTTTGGTTGCT
TGTAAGAGCAATTTTGATATTATTAGTGGTGTTGGTGTTGAAGAGCTGCTTTCTTCTTCT
TGTTCTGGTTTTAGTTCTAGTTCTAGTTCTAGTTCTGCTAATTCATCAATGGAGATTAGT
TGGCCTAGTAATGTCAGACATGTTGCTCATGTCACTTTTGATAGGTTTAATGGATTTCTT
GGACTTCCTGTTGAGTTTGAACCTGAAGTACCTAGAAGACCTCCCAGTGCCAGTACAAGA
GTCTTTGGAGTTTCGACAGATTGCATGCAGCTTTCATTTGACTCTCGAGGAAATAGCGTC
CCCACAATCCTTCTGATGATGCAAGGGCGCTTATACGTTCAAGGTGGCTTGCAGGCTGAA
GGGATCTTCAGGATCAATGCCGAAAATGGCCAAGAAGAATTTGTCAGGGAGCAGCTAAAT
AGGGGAATTATTCCAGATAACATTGACGTCCATTGCCTAGCAGGTCTTATAAAGGCTTGG
TTCAGAGAGTTACCAACGGGAGTTTTGGATTCTCTCTCGCCAGAGGAAATTATGCGTTCT
CAATCGGAAGAAGAGTGTGTGCAGCTCGTGAGACTTCTTCCTCCAACTGAAGCTGCTCTA
TTAGATTGGGCTATTAACTTGATGGCTGATGTTGCTCAACTGGAAAGTTTTAACAAGATG
AATGCACGTAATATTGCTATGGTGTTTGCTCCAAATATGACACAGATGGCAGATCCGTTG
ACTGCTTTGATGTATGCTGTTCAAGTTATGAACTTCCTCAAAACTCTAATTCTCCGGACT
TTGAAAGACCGAGAAGAAACTGTTGTAGAAGCTGGTCCTGCACCAGAATTGGAACCATTC
GATGAAAATGGACATCATAGTGCTTCACAGCCAATAGTTCAGAAGTCTAACGAGATCGAG
GAGGATATCCTTATATCCAAAGGACGACCCTCAAGTGGCGCTGCTAATTCTACCCTCAGA
GAGATAATAGTTGAGAATAAATCCCATGGATTACCGTGTACCATAGAGAACGTTCTTCAG
GAAGATGCGTTCGTTGATTGTCTCAGTGAAATCTCAAACCTGCCAGACAGCACAAAGGAT
GAGCTTGGATCTGGTAACATCAATTCAACAAGTGGAAGAAGTCAGCCAAAAATCCGAAGG
ACTAAAAGCGTGCATTCGAGTAGTTCTAGTCTGAAAGGATCAAAGAAAATGATTGAATGG
CCAACAGGTCATGTAGCTGGAAATTTAGAGAAAGGCAAGGGGGTCAGAATCATCGATAGG
TTGAATTCGACAACAGAAAGGGTGGAAGCATGGCGATGA